RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSN9, Length 489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSN9YDR179C LCB4Q12246 624 aa2.33□□□□□ -2.04
CSN9YDR179C RMP1Q12530 201 aa2.33□□□□□ -2.04
CSN9YDR179C PRP45P28004 379 aaPredicted RBP2.32□□□□□ -2.04
CSN9YDR179C RKM3P38222 552 aa2.32□□□□□ -2.04
CSN9YDR179C IMD2P38697 523 aaKnown RBP2.32□□□□□ -2.04
CSN9YDR179C YIL152WP40455 235 aa2.32□□□□□ -2.04
CSN9YDR179C GPP1P41277 250 aaKnown RBP2.32□□□□□ -2.04
CSN9YDR179C DUG1P43616 481 aaKnown RBP2.32□□□□□ -2.04
CSN9YDR179C YGR237CP50089 785 aa2.32□□□□□ -2.04
CSN9YDR179C IMD3P50095 523 aaKnown RBP2.32□□□□□ -2.04
CSN9YDR179C COS12P53053 380 aa2.32□□□□□ -2.04
CSN9YDR179C YAT1P80235 687 aa2.32□□□□□ -2.04
CSN9YDR179C SCW10Q04951 389 aa2.32□□□□□ -2.04
CSN9YDR179C MLH2Q07980 695 aa2.32□□□□□ -2.04
CSN9YDR179C YPL191CQ08930 360 aa2.32□□□□□ -2.04
CSN9YDR179C PHO2P07269 559 aa2.31□□□□□ -2.04
CSN9YDR179C IDS2P46958 469 aa2.31□□□□□ -2.04
CSN9YDR179C ORC5P50874 479 aa2.31□□□□□ -2.04
CSN9YDR179C MNT2P53059 558 aa2.31□□□□□ -2.04
CSN9YDR179C YNR029CP53729 429 aaKnown RBP2.31□□□□□ -2.04
CSN9YDR179C GIS2P53849 153 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
CSN9YDR179C UBP16Q02863 499 aa2.31□□□□□ -2.04
CSN9YDR179C YGR161W-CQ3E744 92 aa2.31□□□□□ -2.04
CSN9YDR179C YER175W-AQ8TGU4 54 aa2.31□□□□□ -2.04
CSN9YDR179C AMD2P22580 549 aa2.3□□□□□ -2.04
CSN9YDR179C CNA1P23287 553 aa2.3□□□□□ -2.04
CSN9YDR179C RRP43P25359 394 aaPredicted RBP2.3□□□□□ -2.04
CSN9YDR179C MSS51P32335 436 aa2.3□□□□□ -2.04
CSN9YDR179C PET309P32522 965 aaPredicted RBP2.3□□□□□ -2.04
CSN9YDR179C ARC40P38328 384 aaKnown RBP2.3□□□□□ -2.04
CSN9YDR179C GND1P38720 489 aaKnown RBP2.3□□□□□ -2.04
CSN9YDR179C FPR3P38911 411 aaKnown RBP2.3□□□□□ -2.04
CSN9YDR179C EMP65P40085 556 aa2.3□□□□□ -2.04
CSN9YDR179C TES1P41903 349 aaKnown RBP2.3□□□□□ -2.04
CSN9YDR179C YJL107CP42947 387 aa2.3□□□□□ -2.04
CSN9YDR179C SAD1P43589 448 aa2.3□□□□□ -2.04
CSN9YDR179C YGL260WP53056 76 aa2.3□□□□□ -2.04
CSN9YDR179C GPG1P53130 126 aa2.3□□□□□ -2.04
CSN9YDR179C HOL1P53389 586 aa2.3□□□□□ -2.04
CSN9YDR179C YNL144CP53907 740 aa2.3□□□□□ -2.04
CSN9YDR179C RAD34Q06665 692 aa2.3□□□□□ -2.04
CSN9YDR179C YDL242WQ07746 117 aa2.3□□□□□ -2.04
CSN9YDR179C YOR378WQ08902 515 aa2.3□□□□□ -2.04
CSN9YDR179C RRI1Q12468 440 aa2.3□□□□□ -2.04
CSN9YDR179C RTC1Q08281 1341 aa2.29□□□□□ -2.04
CSN9YDR179C ATP12P22135 325 aa2.29□□□□□ -2.04
CSN9YDR179C ARG1P22768 420 aa2.29□□□□□ -2.04
CSN9YDR179C YCR043CP25361 127 aa2.29□□□□□ -2.04
CSN9YDR179C NIC96P34077 839 aa2.29□□□□□ -2.04
CSN9YDR179C RPF2P36160 344 aaKnown RBP2.29□□□□□ -2.04
CSN9YDR179C ARN1P38731 627 aa2.29□□□□□ -2.04
CSN9YDR179C SAP1P39955 897 aaKnown RBP2.29□□□□□ -2.04
CSN9YDR179C GPP2P40106 250 aaKnown RBP2.29□□□□□ -2.04
CSN9YDR179C VRG4P40107 337 aa2.29□□□□□ -2.04
CSN9YDR179C YIL169CP40442 995 aa2.29□□□□□ -2.04
CSN9YDR179C GSM1P42950 618 aa2.29□□□□□ -2.04
CSN9YDR179C YPT11P48559 417 aa2.29□□□□□ -2.04
CSN9YDR179C SLD3P53135 668 aa2.29□□□□□ -2.04
CSN9YDR179C SPC105P53148 917 aa2.29□□□□□ -2.04
CSN9YDR179C YML119WQ03208 357 aa2.29□□□□□ -2.04
CSN9YDR179C ARA2Q04212 335 aa2.29□□□□□ -2.04
CSN9YDR179C TRI1Q05024 226 aa2.29□□□□□ -2.04
CSN9YDR179C ECM22Q05958 814 aaPredicted RBP2.29□□□□□ -2.04
CSN9YDR179C YTH1Q06102 208 aaPredicted RBP2.29□□□□□ -2.04
CSN9YDR179C GAL4P04386 881 aa2.28□□□□□ -2.04
CSN9YDR179C SES1P07284 462 aaKnown RBP2.28□□□□□ -2.04
CSN9YDR179C ILV2P07342 687 aaKnown RBP2.28□□□□□ -2.04
CSN9YDR179C NOP1P15646 327 aaKnown RBP2.28□□□□□ -2.04
CSN9YDR179C SEC18P18759 758 aaKnown RBP2.28□□□□□ -2.04
CSN9YDR179C YCR061WP25639 631 aa2.28□□□□□ -2.04
CSN9YDR179C TAF5P38129 798 aa2.28□□□□□ -2.04
CSN9YDR179C VBA2P38358 474 aaKnown RBP2.28□□□□□ -2.04
CSN9YDR179C MET30P39014 640 aa2.28□□□□□ -2.04
CSN9YDR179C STL1P39932 569 aa2.28□□□□□ -2.04
CSN9YDR179C GSH2Q08220 491 aa2.28□□□□□ -2.04
CSN9YDR179C NRT1Q08485 598 aa2.28□□□□□ -2.04
CSN9YDR179C CWC2Q12046 339 aaPredicted RBP2.28□□□□□ -2.04
CSN9YDR179C URA3P03962 267 aa2.27□□□□□ -2.05
CSN9YDR179C CTT1P06115 562 aa2.27□□□□□ -2.05
CSN9YDR179C SIP1P32578 815 aa2.27□□□□□ -2.05
CSN9YDR179C SER1P33330 395 aaKnown RBP2.27□□□□□ -2.05
CSN9YDR179C VPS8P39702 1274 aa2.27□□□□□ -2.05
CSN9YDR179C TPA1P40032 644 aaKnown RBP2.27□□□□□ -2.05
CSN9YDR179C VFA1P40080 203 aa2.27□□□□□ -2.05
CSN9YDR179C SKP2P42843 763 aa2.27□□□□□ -2.05
CSN9YDR179C YML053CQ04978 212 aa2.27□□□□□ -2.05
CSN9YDR179C YMR034CQ05131 434 aaPredicted RBP2.27□□□□□ -2.05
CSN9YDR179C GPN2Q08726 347 aaPredicted RBP2.27□□□□□ -2.05
CSN9YDR179C PFA4Q12006 378 aa2.27□□□□□ -2.05
CSN9YDR179C COX11P19516 300 aaKnown RBP2.26□□□□□ -2.05
CSN9YDR179C PDE1P22434 369 aa2.26□□□□□ -2.05
CSN9YDR179C PTC6P25646 442 aa2.26□□□□□ -2.05
CSN9YDR179C PCL6P40038 420 aa2.26□□□□□ -2.05
CSN9YDR179C MAD2P40958 196 aa2.26□□□□□ -2.05
CSN9YDR179C VPS25P47142 202 aa2.26□□□□□ -2.05
CSN9YDR179C YJR142WP47173 342 aa2.26□□□□□ -2.05
CSN9YDR179C UBP8P50102 471 aa2.26□□□□□ -2.05
CSN9YDR179C YGL081WP53156 320 aa2.26□□□□□ -2.05
CSN9YDR179C YNR071CP53757 342 aa2.26□□□□□ -2.05
CSN9YDR179C BET4Q00618 327 aa2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms