RNA–Protein interactions for RNA: YDL194W

SNF3, Transcript of Plasma membrane low glucose sensor, regulates glucose transport, yeast

Gene SNF3, Length 2,655 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF3	YDL194W	MMR1	Q06324	491 aa		5.1	□□□□□ -1.59
SNF3	YDL194W	GUP2	Q08929	609 aa		5.1	□□□□□ -1.59
SNF3	YDL194W	TUS1	Q06412	1307 aa		5.1	□□□□□ -1.59
SNF3	YDL194W	LEU2	P04173	364 aa	Predicted RBP	5.1	□□□□□ -1.59
SNF3	YDL194W	YML002W	P0CF17	737 aa		5.1	□□□□□ -1.59
SNF3	YDL194W	SEC62	P21825	274 aa		5.1	□□□□□ -1.59
SNF3	YDL194W	APA2	P22108	325 aa		5.1	□□□□□ -1.59
SNF3	YDL194W	RPB10	P22139	70 aa		5.1	□□□□□ -1.59
SNF3	YDL194W	HSL7	P38274	827 aa		5.1	□□□□□ -1.59
SNF3	YDL194W	REV7	P38927	245 aa		5.1	□□□□□ -1.59
SNF3	YDL194W	MPS3	P47069	682 aa		5.1	□□□□□ -1.59
SNF3	YDL194W	COX16	P47081	118 aa		5.1	□□□□□ -1.59
SNF3	YDL194W	MON1	P53129	644 aa		5.1	□□□□□ -1.59
SNF3	YDL194W	ABZ2	Q03266	374 aa		5.1	□□□□□ -1.59
SNF3	YDL194W	CLU1	Q03690	1277 aa	Known RBP	5.1	□□□□□ -1.59
SNF3	YDL194W	GTO3	Q04806	366 aa		5.1	□□□□□ -1.59
SNF3	YDL194W	ECM22	Q05958	814 aa	Predicted RBP	5.1	□□□□□ -1.59
SNF3	YDL194W	DCS1	Q06151	350 aa		5.1	□□□□□ -1.59
SNF3	YDL194W	YPD1	Q07688	167 aa		5.1	□□□□□ -1.59
SNF3	YDL194W	YEH2	Q07950	538 aa		5.1	□□□□□ -1.59
SNF3	YDL194W	BDS1	Q08347	646 aa		5.1	□□□□□ -1.59
SNF3	YDL194W	RAD61	Q99359	647 aa		5.1	□□□□□ -1.59
SNF3	YDL194W	SSN2	P38931	1420 aa		5.1	□□□□□ -1.59
SNF3	YDL194W	GLG1	P36143	616 aa		5.1	□□□□□ -1.59
SNF3	YDL194W	VMA22	P38784	181 aa		5.1	□□□□□ -1.59
SNF3	YDL194W	PEX28	P38848	579 aa		5.1	□□□□□ -1.59
SNF3	YDL194W	ECL1	P48235	211 aa		5.1	□□□□□ -1.59
SNF3	YDL194W	STB4	P50104	949 aa		5.1	□□□□□ -1.59
SNF3	YDL194W	TIM21	P53220	239 aa		5.1	□□□□□ -1.59
SNF3	YDL194W	COG2	P53271	262 aa		5.1	□□□□□ -1.59
SNF3	YDL194W	ARP4	P80428	489 aa		5.1	□□□□□ -1.59
SNF3	YDL194W	FMP30	Q02883	468 aa		5.1	□□□□□ -1.59
SNF3	YDL194W	KAP120	Q02932	1032 aa		5.1	□□□□□ -1.59
SNF3	YDL194W	TMA46	Q12000	345 aa	Known RBP	5.1	□□□□□ -1.59
SNF3	YDL194W	ULA1	Q12059	462 aa		5.1	□□□□□ -1.59
SNF3	YDL194W	SPA2	P23201	1466 aa	Known RBP	5.09	□□□□□ -1.59
SNF3	YDL194W	GCN4	P03069	281 aa		5.09	□□□□□ -1.59
SNF3	YDL194W	TRK1	P12685	1235 aa		5.09	□□□□□ -1.59
SNF3	YDL194W	HOP1	P20050	605 aa		5.09	□□□□□ -1.59
SNF3	YDL194W	GSY1	P23337	708 aa		5.09	□□□□□ -1.59
SNF3	YDL194W	CLB1	P24868	471 aa		5.09	□□□□□ -1.59
SNF3	YDL194W	GPT2	P36148	743 aa		5.09	□□□□□ -1.59
SNF3	YDL194W	AKL1	P38080	1108 aa	Known RBP	5.09	□□□□□ -1.59
SNF3	YDL194W	EGD2	P38879	174 aa	Known RBP	5.09	□□□□□ -1.59
SNF3	YDL194W	PCL6	P40038	420 aa		5.09	□□□□□ -1.59
SNF3	YDL194W	YER085C	P40058	173 aa		5.09	□□□□□ -1.59
SNF3	YDL194W	ALR2	P43553	858 aa		5.09	□□□□□ -1.59
SNF3	YDL194W	CUL3	P53202	744 aa		5.09	□□□□□ -1.59
SNF3	YDL194W	DAL4	Q04895	635 aa		5.09	□□□□□ -1.59
SNF3	YDL194W	YLR173W	Q06247	608 aa		5.09	□□□□□ -1.59
SNF3	YDL194W	HBT1	Q07653	1046 aa	Known RBP	5.09	□□□□□ -1.59
SNF3	YDL194W	NGL1	Q08213	363 aa	Known RBP	5.09	□□□□□ -1.59
SNF3	YDL194W	TCO89	Q08921	799 aa		5.09	□□□□□ -1.59
SNF3	YDL194W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	5.09	□□□□□ -1.6	not detected
SNF3	YDL194W	PRE8	P23639	250 aa		5.09	□□□□□ -1.6
SNF3	YDL194W	GID7	P25569	745 aa		5.09	□□□□□ -1.6
SNF3	YDL194W	YCL049C	P25577	312 aa		5.09	□□□□□ -1.6
SNF3	YDL194W	NAM9	P27929	486 aa		5.09	□□□□□ -1.6
SNF3	YDL194W	YME2	P32843	850 aa		5.09	□□□□□ -1.6
SNF3	YDL194W	PRS1	P32895	427 aa	Known RBP	5.09	□□□□□ -1.6
SNF3	YDL194W	UTP11	P34247	250 aa	Predicted RBP	5.09	□□□□□ -1.6
SNF3	YDL194W	STB6	P36085	766 aa		5.09	□□□□□ -1.6
SNF3	YDL194W	ERT1	P38140	529 aa		5.09	□□□□□ -1.6
SNF3	YDL194W	NCL1	P38205	684 aa	Known RBP	5.09	□□□□□ -1.6
SNF3	YDL194W	BMT2	P38278	337 aa		5.09	□□□□□ -1.6
SNF3	YDL194W	MUP3	P38734	546 aa		5.09	□□□□□ -1.6
SNF3	YDL194W	BZZ1	P38822	633 aa		5.09	□□□□□ -1.6
SNF3	YDL194W	PCI8	P40512	444 aa		5.09	□□□□□ -1.6
SNF3	YDL194W	OTU1	P43558	301 aa		5.09	□□□□□ -1.6
SNF3	YDL194W	GLG2	P47011	380 aa		5.09	□□□□□ -1.6
SNF3	YDL194W	MPP6	P53725	186 aa	Predicted RBP	5.09	□□□□□ -1.6
SNF3	YDL194W	GPD1	Q00055	391 aa	Known RBP	5.09	□□□□□ -1.6
SNF3	YDL194W	INA17	Q02888	182 aa		5.09	□□□□□ -1.6
SNF3	YDL194W	ARO10	Q06408	635 aa		5.09	□□□□□ -1.6
SNF3	YDL194W	YDL114W	Q07530	308 aa		5.09	□□□□□ -1.6
SNF3	YDL194W	SNA4	Q07549	140 aa		5.09	□□□□□ -1.6
SNF3	YDL194W	SMC5	Q08204	1093 aa		5.09	□□□□□ -1.6
SNF3	YDL194W	LEU9	Q12166	604 aa	Known RBP	5.09	□□□□□ -1.6
SNF3	YDL194W	ATG11	Q12527	1178 aa		5.09	□□□□□ -1.6
SNF3	YDL194W	RPS6A	P0CX37	236 aa	Known RBP	5.08	□□□□□ -1.6
SNF3	YDL194W	RPS6B	P0CX38	236 aa	Predicted RBP	5.08	□□□□□ -1.6
SNF3	YDL194W	DAP2	P18962	818 aa		5.08	□□□□□ -1.6
SNF3	YDL194W	CAF4	P36130	643 aa		5.08	□□□□□ -1.6
SNF3	YDL194W	APE3	P37302	537 aa	Known RBP	5.08	□□□□□ -1.6
SNF3	YDL194W	SHQ1	P40486	507 aa	Predicted RBP	5.08	□□□□□ -1.6
SNF3	YDL194W	YFR006W	P43590	535 aa		5.08	□□□□□ -1.6
SNF3	YDL194W	NET1	P47035	1189 aa		5.08	□□□□□ -1.6
SNF3	YDL194W	SLX9	P53251	210 aa	Predicted RBP	5.08	□□□□□ -1.6
SNF3	YDL194W	GOR1	P53839	350 aa		5.08	□□□□□ -1.6
SNF3	YDL194W	MRPL13	Q02204	264 aa		5.08	□□□□□ -1.6
SNF3	YDL194W	PEX29	Q03370	554 aa		5.08	□□□□□ -1.6
SNF3	YDL194W	YFT2	Q06676	274 aa		5.08	□□□□□ -1.6
SNF3	YDL194W	NDE2	Q07500	545 aa		5.08	□□□□□ -1.6
SNF3	YDL194W	GUD1	Q07729	489 aa		5.08	□□□□□ -1.6
SNF3	YDL194W	BUD7	Q08754	746 aa		5.08	□□□□□ -1.6
SNF3	YDL194W	YOR289W	Q12012	251 aa	Predicted RBP	5.08	□□□□□ -1.6
SNF3	YDL194W	SRO7	Q12038	1033 aa		5.08	□□□□□ -1.6
SNF3	YDL194W	MSH5	Q12175	901 aa		5.08	□□□□□ -1.6
SNF3	YDL194W	GPM3	Q12326	303 aa		5.08	□□□□□ -1.6
SNF3	YDL194W	YOL159C-A	Q3E769	90 aa		5.08	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 45.2 ms