RNA–Protein interactions for RNA: YDL140C

RPO21, Transcript of RNA polymerase II largest subunit B220, yeast

Gene RPO21, Length 5,202 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPO21	YDL140C	ECM32	P32644	1121 aa	Known RBP	3.87	□□□□□ -1.79
RPO21	YDL140C	SLA1	P32790	1244 aa		3.87	□□□□□ -1.79
RPO21	YDL140C	SEC61	P32915	480 aa		3.87	□□□□□ -1.79
RPO21	YDL140C	GND1	P38720	489 aa	Known RBP	3.87	□□□□□ -1.79
RPO21	YDL140C	YHR054C	P38780	354 aa		3.87	□□□□□ -1.79
RPO21	YDL140C	ARC1	P46672	376 aa	Known RBP	3.87	□□□□□ -1.79
RPO21	YDL140C	CTK3	P46963	296 aa	Predicted RBP	3.87	□□□□□ -1.79
RPO21	YDL140C	ATH1	P48016	1211 aa		3.87	□□□□□ -1.79
RPO21	YDL140C	RAD17	P48581	401 aa		3.87	□□□□□ -1.79
RPO21	YDL140C	YSA1	Q01976	231 aa		3.87	□□□□□ -1.79
RPO21	YDL140C	NOG1	Q02892	647 aa	Known RBP	3.87	□□□□□ -1.79
RPO21	YDL140C	SSL1	Q04673	461 aa	Predicted RBP	3.87	□□□□□ -1.79
RPO21	YDL140C	GUD1	Q07729	489 aa		3.87	□□□□□ -1.79
RPO21	YDL140C	ELG1	Q12050	791 aa		3.87	□□□□□ -1.79
RPO21	YDL140C	RPL7B	Q12213	244 aa	Known RBP	3.87	□□□□□ -1.79
RPO21	YDL140C	YDR461C-A	Q2V2P7	80 aa		3.87	□□□□□ -1.79
RPO21	YDL140C	CHL1	P22516	861 aa	Predicted RBP	3.87	□□□□□ -1.79
RPO21	YDL140C	KAP122	P32767	1081 aa		3.87	□□□□□ -1.79
RPO21	YDL140C	STE5	P32917	917 aa		3.87	□□□□□ -1.79
RPO21	YDL140C	TAF14	P35189	244 aa		3.87	□□□□□ -1.79
RPO21	YDL140C	BLI1	P35727	113 aa		3.87	□□□□□ -1.79
RPO21	YDL140C	PIM1	P36775	1133 aa		3.87	□□□□□ -1.79
RPO21	YDL140C	NMD5	P46970	1048 aa		3.87	□□□□□ -1.79
RPO21	YDL140C	YJL055W	P47044	245 aa		3.87	□□□□□ -1.79
RPO21	YDL140C	OCA1	P50946	238 aa	Predicted RBP	3.87	□□□□□ -1.79
RPO21	YDL140C	CDC14	Q00684	551 aa		3.87	□□□□□ -1.79
RPO21	YDL140C	STP1	Q00947	519 aa		3.87	□□□□□ -1.79
RPO21	YDL140C	REH1	Q06709	432 aa		3.87	□□□□□ -1.79
RPO21	YDL140C	NOP14	Q99207	810 aa	Known RBP	3.87	□□□□□ -1.79
RPO21	YDL140C	TEF1	P02994	458 aa	Known RBP	3.86	□□□□□ -1.79
RPO21	YDL140C	SFL1	P20134	766 aa		3.86	□□□□□ -1.79
RPO21	YDL140C	PRP28	P23394	588 aa		3.86	□□□□□ -1.79
RPO21	YDL140C	SSE2	P32590	693 aa	Known RBP	3.86	□□□□□ -1.79
RPO21	YDL140C	TOM20	P35180	183 aa		3.86	□□□□□ -1.79
RPO21	YDL140C	PRE3	P38624	215 aa		3.86	□□□□□ -1.79
RPO21	YDL140C	TCB2	P48231	1178 aa		3.86	□□□□□ -1.79
RPO21	YDL140C	MTR3	P48240	250 aa	Predicted RBP	3.86	□□□□□ -1.79
RPO21	YDL140C	SHE4	P51534	789 aa		3.86	□□□□□ -1.79
RPO21	YDL140C	YNL108C	P53929	270 aa		3.86	□□□□□ -1.79
RPO21	YDL140C	APC4	Q04601	652 aa		3.86	□□□□□ -1.79
RPO21	YDL140C	MRX10	Q05648	414 aa		3.86	□□□□□ -1.79
RPO21	YDL140C	YLR446W	Q06204	433 aa		3.86	□□□□□ -1.79
RPO21	YDL140C	DBP9	Q06218	594 aa	Known RBP	3.86	□□□□□ -1.79
RPO21	YDL140C	DNF2	Q12675	1612 aa		3.86	□□□□□ -1.79
RPO21	YDL140C	RAD7	P06779	565 aa		3.86	□□□□□ -1.79
RPO21	YDL140C	SPS4	P09937	338 aa		3.86	□□□□□ -1.79
RPO21	YDL140C	TRK1	P12685	1235 aa		3.86	□□□□□ -1.79
RPO21	YDL140C	PMA2	P19657	947 aa		3.86	□□□□□ -1.79
RPO21	YDL140C	RSA4	P25382	515 aa	Known RBP	3.86	□□□□□ -1.79
RPO21	YDL140C	RPC19	P28000	142 aa	Known RBP	3.86	□□□□□ -1.79
RPO21	YDL140C	PRR1	P28708	518 aa		3.86	□□□□□ -1.79
RPO21	YDL140C	NTH1	P32356	751 aa		3.86	□□□□□ -1.79
RPO21	YDL140C	RRN6	P32786	894 aa		3.86	□□□□□ -1.79
RPO21	YDL140C	FMP23	P38231	175 aa		3.86	□□□□□ -1.79
RPO21	YDL140C	EMI1	Q04406	187 aa		3.86	□□□□□ -1.79
RPO21	YDL140C	TFC6	Q06339	672 aa		3.86	□□□□□ -1.79
RPO21	YDL140C	RKM5	Q12367	367 aa		3.86	□□□□□ -1.79
RPO21	YDL140C	ENO2	P00925	437 aa	Known RBP	3.86	□□□□□ -1.79
RPO21	YDL140C	RHO1	P06780	209 aa	Known RBP	3.86	□□□□□ -1.79
RPO21	YDL140C	BCY1	P07278	416 aa	Known RBP	3.86	□□□□□ -1.79
RPO21	YDL140C	PRB1	P09232	635 aa		3.86	□□□□□ -1.79
RPO21	YDL140C	ADE17	P38009	592 aa	Known RBP	3.86	□□□□□ -1.79
RPO21	YDL140C	LAS21	P40367	830 aa		3.86	□□□□□ -1.79
RPO21	YDL140C	YIL161W	P40449	235 aa	Known RBP	3.86	□□□□□ -1.79
RPO21	YDL140C	SEC24	P40482	926 aa	Known RBP	3.86	□□□□□ -1.79
RPO21	YDL140C	OSH6	Q02201	448 aa		3.86	□□□□□ -1.79
RPO21	YDL140C	YVH1	Q02256	364 aa	Known RBP	3.86	□□□□□ -1.79
RPO21	YDL140C	SPG3	Q04398	127 aa	Predicted RBP	3.86	□□□□□ -1.79
RPO21	YDL140C	HRK1	Q08732	759 aa	Known RBP	3.86	□□□□□ -1.79
RPO21	YDL140C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.86	□□□□□ -1.79	not detected
RPO21	YDL140C	CTR86	P25355	563 aa		3.86	□□□□□ -1.79
RPO21	YDL140C	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.86	□□□□□ -1.79	not detected
RPO21	YDL140C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	3.86	□□□□□ -1.79	not detected
RPO21	YDL140C	MCM7	P38132	845 aa		3.86	□□□□□ -1.79
RPO21	YDL140C	RPT2	P40327	437 aa	Known RBP	3.86	□□□□□ -1.79
RPO21	YDL140C	YJL016W	P47072	561 aa		3.86	□□□□□ -1.79
RPO21	YDL140C	RPS7B	P48164	190 aa	Known RBP	3.86	□□□□□ -1.79
RPO21	YDL140C	PRP31	P49704	494 aa	Predicted RBP	3.86	□□□□□ -1.79
RPO21	YDL140C	RMD9	P53140	646 aa	Known RBP	3.86	□□□□□ -1.79
RPO21	YDL140C	SRP1	Q02821	542 aa	Known RBP	3.86	□□□□□ -1.79
RPO21	YDL140C	IOC2	Q12072	812 aa		3.86	□□□□□ -1.79
RPO21	YDL140C	EFT1	P32324	842 aa	Known RBP	3.85	□□□□□ -1.79
RPO21	YDL140C	PRX1	P34227	261 aa	Known RBP	3.85	□□□□□ -1.79
RPO21	YDL140C	AKR1	P39010	764 aa		3.85	□□□□□ -1.79
RPO21	YDL140C	YER121W	P40076	114 aa		3.85	□□□□□ -1.79
RPO21	YDL140C	YNR063W	P53749	607 aa		3.85	□□□□□ -1.79
RPO21	YDL140C	ADE12	P80210	433 aa	Known RBP	3.85	□□□□□ -1.79
RPO21	YDL140C	YDR444W	Q04093	687 aa		3.85	□□□□□ -1.79
RPO21	YDL140C	APL4	Q12028	832 aa		3.85	□□□□□ -1.79
RPO21	YDL140C	PDH1	Q12428	516 aa	Known RBP	3.85	□□□□□ -1.79
RPO21	YDL140C	RPP1B	P10622	106 aa	Known RBP	3.85	□□□□□ -1.79
RPO21	YDL140C	GDA1	P32621	518 aa		3.85	□□□□□ -1.79
RPO21	YDL140C	KAE1	P36132	386 aa		3.85	□□□□□ -1.79
RPO21	YDL140C	TRZ1	P36159	838 aa	Predicted RBP	3.85	□□□□□ -1.79
RPO21	YDL140C	SIF2	P38262	535 aa		3.85	□□□□□ -1.79
RPO21	YDL140C	ORC4	P54791	529 aa		3.85	□□□□□ -1.79
RPO21	YDL140C	VTC3	Q02725	835 aa		3.85	□□□□□ -1.79
RPO21	YDL140C	PIB1	Q06651	286 aa		3.85	□□□□□ -1.79
RPO21	YDL140C	ENT4	Q07872	247 aa		3.85	□□□□□ -1.79
RPO21	YDL140C	NSL1	Q12143	216 aa		3.85	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms