RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeastyeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB2YDL084W MIH1P23748 554 aa5.91□□□□□ -1.46
SUB2YDL084W RVS161P25343 265 aaKnown RBP5.91□□□□□ -1.46
SUB2YDL084W APL1P27351 700 aa5.91□□□□□ -1.46
SUB2YDL084W GYP6P32806 458 aa5.91□□□□□ -1.46
SUB2YDL084W SUR1P33300 382 aa5.91□□□□□ -1.46
SUB2YDL084W NIC96P34077 839 aa5.91□□□□□ -1.46
SUB2YDL084W PCH2P38126 564 aa5.91□□□□□ -1.46
SUB2YDL084W PIG2P40187 538 aa5.91□□□□□ -1.46
SUB2YDL084W SLM1P40485 686 aa5.91□□□□□ -1.46
SUB2YDL084W IRC6P43615 237 aa5.91□□□□□ -1.46
SUB2YDL084W LSM1P47017 172 aaKnown RBP5.91□□□□□ -1.46
SUB2YDL084W ROM1P53046 1155 aa5.91□□□□□ -1.46
SUB2YDL084W MCM6P53091 1017 aaKnown RBP5.91□□□□□ -1.46
SUB2YDL084W OKP1P53298 406 aa5.91□□□□□ -1.46
SUB2YDL084W SSU72P53538 206 aaPredicted RBP5.91□□□□□ -1.46
SUB2YDL084W YKR005CQ02203 525 aa5.91□□□□□ -1.46
SUB2YDL084W SWP1Q02795 286 aa5.91□□□□□ -1.46
SUB2YDL084W NAN1Q02931 896 aaKnown RBP5.91□□□□□ -1.46
SUB2YDL084W FRK1Q03002 865 aaPredicted RBP5.91□□□□□ -1.46
SUB2YDL084W RPN9Q04062 393 aaKnown RBP5.91□□□□□ -1.46
SUB2YDL084W VBA4Q04602 768 aaKnown RBP5.91□□□□□ -1.46
SUB2YDL084W VPS38Q05919 439 aa5.91□□□□□ -1.46
SUB2YDL084W YLR345WQ06137 509 aa5.91□□□□□ -1.46
SUB2YDL084W TRE2Q08693 809 aa5.91□□□□□ -1.46
SUB2YDL084W HMS1Q12398 434 aa5.91□□□□□ -1.46
SUB2YDL084W NCB2Q92317 146 aa5.91□□□□□ -1.46
SUB2YDL084W CDC4P07834 779 aa5.9□□□□□ -1.47
SUB2YDL084W GAL7P08431 366 aa5.9□□□□□ -1.47
SUB2YDL084W TYR1P20049 452 aa5.9□□□□□ -1.47
SUB2YDL084W DAL81P21657 970 aa5.9□□□□□ -1.47
SUB2YDL084W CMK2P22517 447 aa5.9□□□□□ -1.47
SUB2YDL084W PHO3P24031 467 aa5.9□□□□□ -1.47
SUB2YDL084W EMC1P25574 760 aa5.9□□□□□ -1.47
SUB2YDL084W PAT1P25644 796 aaKnown RBP5.9□□□□□ -1.47
SUB2YDL084W POT1P27796 417 aaKnown RBP RIP-Chip data5.9□□□□□ -1.47not detected
SUB2YDL084W CRM1P30822 1084 aaKnown RBP5.9□□□□□ -1.47
SUB2YDL084W NGG1P32494 702 aa5.9□□□□□ -1.47
SUB2YDL084W MKS1P34072 584 aa5.9□□□□□ -1.47
SUB2YDL084W MTH1P35198 433 aa5.9□□□□□ -1.47
SUB2YDL084W LRG1P35688 1017 aa5.9□□□□□ -1.47
SUB2YDL084W PGM2P37012 569 aaKnown RBP5.9□□□□□ -1.47
SUB2YDL084W AMN1P38285 549 aaPredicted RBP5.9□□□□□ -1.47
SUB2YDL084W YHL041WP38730 149 aa5.9□□□□□ -1.47
SUB2YDL084W CCC2P38995 1004 aa5.9□□□□□ -1.47
SUB2YDL084W TPA1P40032 644 aaKnown RBP5.9□□□□□ -1.47
SUB2YDL084W ATF1P40353 525 aa5.9□□□□□ -1.47
SUB2YDL084W IRC24P40580 263 aa5.9□□□□□ -1.47
SUB2YDL084W ILM1P47155 203 aa5.9□□□□□ -1.47
SUB2YDL084W NAF1P53919 492 aaKnown RBP5.9□□□□□ -1.47
SUB2YDL084W VAC7P53950 1165 aa5.9□□□□□ -1.47
SUB2YDL084W MEC3Q02574 474 aa5.9□□□□□ -1.47
SUB2YDL084W FIN1Q03898 291 aa5.9□□□□□ -1.47
SUB2YDL084W ECM18Q04623 453 aa5.9□□□□□ -1.47
SUB2YDL084W BOP2Q06150 570 aa5.9□□□□□ -1.47
SUB2YDL084W SPH1Q06160 661 aa5.9□□□□□ -1.47
SUB2YDL084W DXO1Q06349 442 aa5.9□□□□□ -1.47
SUB2YDL084W YLL032CQ07834 825 aaKnown RBP RIP-Chip data5.9□□□□□ -1.47not detected
SUB2YDL084W THP3Q12049 470 aaKnown RBP5.9□□□□□ -1.47
SUB2YDL084W FAP7Q12055 197 aaPredicted RBP5.9□□□□□ -1.47
SUB2YDL084W PUS9Q12069 462 aa5.9□□□□□ -1.47
SUB2YDL084W MED2Q12124 431 aa5.9□□□□□ -1.47
SUB2YDL084W TIP41Q12199 356 aa5.9□□□□□ -1.47
SUB2YDL084W OSW2Q12202 724 aa5.9□□□□□ -1.47
SUB2YDL084W GIS3Q12418 502 aa5.9□□□□□ -1.47
SUB2YDL084W RPS9AO13516 197 aaKnown RBP5.89□□□□□ -1.47
SUB2YDL084W PMA1P05030 918 aaKnown RBP5.89□□□□□ -1.47
SUB2YDL084W RPS9BP05755 195 aaKnown RBP5.89□□□□□ -1.47
SUB2YDL084W ADE3P07245 946 aaKnown RBP5.89□□□□□ -1.47
SUB2YDL084W MSD1P15179 658 aaKnown RBP5.89□□□□□ -1.47
SUB2YDL084W MIP1P15801 1254 aa5.89□□□□□ -1.47
SUB2YDL084W BUD23P25627 275 aaPredicted RBP5.89□□□□□ -1.47
SUB2YDL084W ERG1P32476 496 aaKnown RBP5.89□□□□□ -1.47
SUB2YDL084W SUA5P32579 426 aa5.89□□□□□ -1.47
SUB2YDL084W GDA1P32621 518 aa5.89□□□□□ -1.47
SUB2YDL084W NTH2P35172 780 aa5.89□□□□□ -1.47
SUB2YDL084W TPO5P36029 618 aa5.89□□□□□ -1.47
SUB2YDL084W HEL1P36113 551 aa5.89□□□□□ -1.47
SUB2YDL084W DBP7P36120 742 aaKnown RBP5.89□□□□□ -1.47
SUB2YDL084W LSM12P38828 187 aaKnown RBP5.89□□□□□ -1.47
SUB2YDL084W PEX28P38848 579 aa5.89□□□□□ -1.47
SUB2YDL084W FRT2P39734 528 aa5.89□□□□□ -1.47
SUB2YDL084W ACA1P39970 489 aa5.89□□□□□ -1.47
SUB2YDL084W PCL6P40038 420 aa5.89□□□□□ -1.47
SUB2YDL084W SCC4P40090 624 aa5.89□□□□□ -1.47
SUB2YDL084W CIR1P42940 261 aa5.89□□□□□ -1.47
SUB2YDL084W PCL10P53124 433 aa5.89□□□□□ -1.47
SUB2YDL084W YGR111WP53265 400 aa5.89□□□□□ -1.47
SUB2YDL084W SQS1P53866 767 aaKnown RBP5.89□□□□□ -1.47
SUB2YDL084W ORC4P54791 529 aa5.89□□□□□ -1.47
SUB2YDL084W REC102Q02721 264 aa5.89□□□□□ -1.47
SUB2YDL084W YPL107WQ02873 248 aa5.89□□□□□ -1.47
SUB2YDL084W UME1Q03010 460 aa5.89□□□□□ -1.47
SUB2YDL084W ARA2Q04212 335 aa5.89□□□□□ -1.47
SUB2YDL084W GTO3Q04806 366 aa5.89□□□□□ -1.47
SUB2YDL084W COX20Q04935 205 aa5.89□□□□□ -1.47
SUB2YDL084W DCR2Q05924 578 aa5.89□□□□□ -1.47
SUB2YDL084W BBP1Q12365 385 aa5.89□□□□□ -1.47
SUB2YDL084W BUD4P47136 1447 aa5.88□□□□□ -1.47
SUB2YDL084W ARG3P05150 338 aa5.88□□□□□ -1.47
SUB2YDL084W ARG80P07249 177 aa5.88□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms