RNA–Protein interactions for RNA: YDL053C

PBP4, Transcript of Pbp1p binding protein, yeast

Gene PBP4, Length 558 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PBP4	YDL053C	UBP16	Q02863	499 aa		3.62	□□□□□ -1.83
PBP4	YDL053C	HRD3	Q05787	833 aa		3.62	□□□□□ -1.83
PBP4	YDL053C	LCB4	Q12246	624 aa		3.62	□□□□□ -1.83
PBP4	YDL053C	NYV1	Q12255	253 aa		3.62	□□□□□ -1.83
PBP4	YDL053C	FRE7	Q12333	620 aa		3.62	□□□□□ -1.83
PBP4	YDL053C	YEF3	P16521	1044 aa	Known RBP	3.61	□□□□□ -1.83
PBP4	YDL053C	SIR1	P21691	654 aa		3.61	□□□□□ -1.83
PBP4	YDL053C	RRP43	P25359	394 aa	Predicted RBP	3.61	□□□□□ -1.83
PBP4	YDL053C	LAS21	P40367	830 aa		3.61	□□□□□ -1.83
PBP4	YDL053C	BST1	P43571	1029 aa		3.61	□□□□□ -1.83
PBP4	YDL053C	SAE2	P46946	345 aa		3.61	□□□□□ -1.83
PBP4	YDL053C	BSP1	Q06604	576 aa		3.61	□□□□□ -1.83
PBP4	YDL053C	HIM1	Q06674	414 aa		3.61	□□□□□ -1.83
PBP4	YDL053C	IRC3	Q06683	689 aa		3.61	□□□□□ -1.83
PBP4	YDL053C	AIM6	Q07716	390 aa		3.61	□□□□□ -1.83
PBP4	YDL053C	YDL242W	Q07746	117 aa		3.61	□□□□□ -1.83
PBP4	YDL053C	RDL1	Q12305	139 aa	Known RBP	3.61	□□□□□ -1.83
PBP4	YDL053C	SAP1	P39955	897 aa	Known RBP	3.6	□□□□□ -1.83
PBP4	YDL053C	PLM2	Q04383	521 aa		3.6	□□□□□ -1.83
PBP4	YDL053C	YML053C	Q04978	212 aa		3.6	□□□□□ -1.83
PBP4	YDL053C	EIS1	Q05050	843 aa	Known RBP	3.6	□□□□□ -1.83
PBP4	YDL053C	ORM2	Q06144	216 aa		3.6	□□□□□ -1.83
PBP4	YDL053C	SPN1	Q06505	410 aa	Predicted RBP	3.6	□□□□□ -1.83
PBP4	YDL053C	ICL2	Q12031	575 aa		3.6	□□□□□ -1.83
PBP4	YDL053C	RRP6	Q12149	733 aa	Known RBP	3.6	□□□□□ -1.83
PBP4	YDL053C	YLR111W	Q12528	110 aa		3.6	□□□□□ -1.83
PBP4	YDL053C	PIF1	P07271	859 aa		3.59	□□□□□ -1.83
PBP4	YDL053C	POL3	P15436	1097 aa		3.59	□□□□□ -1.83
PBP4	YDL053C	KGD2	P19262	463 aa	Predicted RBP	3.59	□□□□□ -1.83
PBP4	YDL053C	RIT1	P23796	513 aa		3.59	□□□□□ -1.83
PBP4	YDL053C	BEM3	P32873	1128 aa		3.59	□□□□□ -1.83
PBP4	YDL053C	YHL041W	P38730	149 aa		3.59	□□□□□ -1.83
PBP4	YDL053C	SPC72	P39723	622 aa		3.59	□□□□□ -1.83
PBP4	YDL053C	LTP1	P40347	161 aa		3.59	□□□□□ -1.83
PBP4	YDL053C	RAD26	P40352	1085 aa		3.59	□□□□□ -1.83
PBP4	YDL053C	XBP1	P40489	647 aa		3.59	□□□□□ -1.83
PBP4	YDL053C	CAB2	P40506	365 aa		3.59	□□□□□ -1.83
PBP4	YDL053C	BNA3	P47039	444 aa	Known RBP	3.59	□□□□□ -1.83
PBP4	YDL053C	BPL1	P48445	690 aa	Predicted RBP	3.59	□□□□□ -1.83
PBP4	YDL053C	IOC4	Q04213	475 aa		3.59	□□□□□ -1.83
PBP4	YDL053C	BI2	P03873	423 aa		3.58	□□□□□ -1.84
PBP4	YDL053C	ADE3	P07245	946 aa	Known RBP	3.58	□□□□□ -1.84
PBP4	YDL053C	MCM3	P24279	971 aa	Known RBP	3.58	□□□□□ -1.84
PBP4	YDL053C	SWI4	P25302	1093 aa	Known RBP	3.58	□□□□□ -1.84
PBP4	YDL053C	MSH1	P25846	959 aa		3.58	□□□□□ -1.84
PBP4	YDL053C	YJR008W	P47085	338 aa		3.58	□□□□□ -1.84
PBP4	YDL053C	CPR6	P53691	371 aa	Known RBP	3.58	□□□□□ -1.84
PBP4	YDL053C	IWR1	Q07532	353 aa	Predicted RBP	3.58	□□□□□ -1.84
PBP4	YDL053C	PNO1	Q99216	274 aa	Known RBP	3.58	□□□□□ -1.84
PBP4	YDL053C	RTC1	Q08281	1341 aa		3.58	□□□□□ -1.84
PBP4	YDL053C	SEC18	P18759	758 aa	Known RBP	3.57	□□□□□ -1.84
PBP4	YDL053C	PDE1	P22434	369 aa		3.57	□□□□□ -1.84
PBP4	YDL053C	KES1	P35844	434 aa	Known RBP	3.57	□□□□□ -1.84
PBP4	YDL053C	ERC1	P38767	581 aa		3.57	□□□□□ -1.84
PBP4	YDL053C	VPS27	P40343	622 aa	Known RBP	3.57	□□□□□ -1.84
PBP4	YDL053C	ULP2	P40537	1034 aa	Predicted RBP	3.57	□□□□□ -1.84
PBP4	YDL053C	CIR1	P42940	261 aa		3.57	□□□□□ -1.84
PBP4	YDL053C	NMD5	P46970	1048 aa		3.57	□□□□□ -1.84
PBP4	YDL053C	AAT1	Q01802	451 aa		3.57	□□□□□ -1.84
PBP4	YDL053C	YPL071C	Q02864	156 aa		3.57	□□□□□ -1.84
PBP4	YDL053C	ARA2	Q04212	335 aa		3.57	□□□□□ -1.84
PBP4	YDL053C	RAD34	Q06665	692 aa		3.57	□□□□□ -1.84
PBP4	YDL053C	YBR255C-A	Q3E776	120 aa		3.57	□□□□□ -1.84
PBP4	YDL053C	SES1	P07284	462 aa	Known RBP	3.56	□□□□□ -1.84
PBP4	YDL053C	URE2	P23202	354 aa	Known RBP	3.56	□□□□□ -1.84
PBP4	YDL053C	PTP1	P25044	335 aa		3.56	□□□□□ -1.84
PBP4	YDL053C	SIP1	P32578	815 aa		3.56	□□□□□ -1.84
PBP4	YDL053C	FTH1	P38310	465 aa		3.56	□□□□□ -1.84
PBP4	YDL053C	TAM41	P53230	385 aa		3.56	□□□□□ -1.84
PBP4	YDL053C	YPL108W	Q02872	168 aa	Predicted RBP	3.56	□□□□□ -1.84
PBP4	YDL053C	RSC9	Q03124	581 aa		3.56	□□□□□ -1.84
PBP4	YDL053C	TPO3	Q06451	622 aa		3.56	□□□□□ -1.84
PBP4	YDL053C	PRS5	Q12265	496 aa	Known RBP	3.56	□□□□□ -1.84
PBP4	YDL053C	MIS1	P09440	975 aa	Known RBP	3.55	□□□□□ -1.84
PBP4	YDL053C	PHO81	P17442	1178 aa		3.55	□□□□□ -1.84
PBP4	YDL053C	MAK32	P23060	363 aa		3.55	□□□□□ -1.84
PBP4	YDL053C	ARP2	P32381	391 aa	Known RBP	3.55	□□□□□ -1.84
PBP4	YDL053C	RPF2	P36160	344 aa	Known RBP	3.55	□□□□□ -1.84
PBP4	YDL053C	YBR138C	P38277	524 aa		3.55	□□□□□ -1.84
PBP4	YDL053C	IMD2	P38697	523 aa	Known RBP	3.55	□□□□□ -1.84
PBP4	YDL053C	NOP2	P40991	618 aa	Known RBP	3.55	□□□□□ -1.84
PBP4	YDL053C	PSA1	P41940	361 aa	Known RBP	3.55	□□□□□ -1.84
PBP4	YDL053C	SNO3	P43544	222 aa		3.55	□□□□□ -1.84
PBP4	YDL053C	NET1	P47035	1189 aa		3.55	□□□□□ -1.84
PBP4	YDL053C	IMD3	P50095	523 aa	Known RBP	3.55	□□□□□ -1.84
PBP4	YDL053C	IMA1	P53051	589 aa		3.55	□□□□□ -1.84
PBP4	YDL053C	UBX4	P54730	416 aa		3.55	□□□□□ -1.84
PBP4	YDL053C	ATG21	Q02887	496 aa		3.55	□□□□□ -1.84
PBP4	YDL053C	YPL191C	Q08930	360 aa		3.55	□□□□□ -1.84
PBP4	YDL053C	AFT2	Q08957	416 aa		3.55	□□□□□ -1.84
PBP4	YDL053C	SUL2	Q12325	893 aa		3.55	□□□□□ -1.84
PBP4	YDL053C	CET1	O13297	549 aa	Predicted RBP	3.54	□□□□□ -1.84
PBP4	YDL053C	PET122	P10355	254 aa		3.54	□□□□□ -1.84
PBP4	YDL053C	BIK1	P11709	440 aa		3.54	□□□□□ -1.84
PBP4	YDL053C	APA1	P16550	321 aa	Known RBP	3.54	□□□□□ -1.84
PBP4	YDL053C	VBA2	P38358	474 aa	Known RBP	3.54	□□□□□ -1.84
PBP4	YDL053C	NPA3	P47122	385 aa		3.54	□□□□□ -1.84
PBP4	YDL053C	YGR079W	P53249	370 aa		3.54	□□□□□ -1.84
PBP4	YDL053C	PAP2	P53632	584 aa	Known RBP	3.54	□□□□□ -1.84
PBP4	YDL053C	YNL058C	P53947	316 aa		3.54	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms