RNA–Protein interactions for RNA: YCR012W

PGK1, Transcript of 3-phosphoglycerate kinase, yeastyeast

Gene PGK1, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PGK1YCR012W SAN1P22470 610 aa6.13□□□□□ -1.43
PGK1YCR012W SAT4P25333 603 aaKnown RBP6.13□□□□□ -1.43
PGK1YCR012W VAC17P25591 423 aa6.13□□□□□ -1.43
PGK1YCR012W HRR25P29295 494 aaKnown RBP6.13□□□□□ -1.43
PGK1YCR012W ZIP1P31111 875 aa6.13□□□□□ -1.43
PGK1YCR012W RIM1P32445 135 aaKnown RBP6.13□□□□□ -1.43
PGK1YCR012W SPT16P32558 1035 aaKnown RBP6.13□□□□□ -1.43
PGK1YCR012W ABZ1P37254 787 aaPredicted RBP6.13□□□□□ -1.43
PGK1YCR012W AIM18P38884 321 aa6.13□□□□□ -1.43
PGK1YCR012W SEC31P38968 1273 aaKnown RBP6.13□□□□□ -1.43
PGK1YCR012W LAM5P43560 674 aa6.13□□□□□ -1.43
PGK1YCR012W TRF5P48561 642 aaKnown RBP6.13□□□□□ -1.43
PGK1YCR012W YGL108CP53139 140 aa6.13□□□□□ -1.43
PGK1YCR012W PRO2P54885 456 aaKnown RBP6.13□□□□□ -1.43
PGK1YCR012W SLU7Q02775 382 aaKnown RBP6.13□□□□□ -1.43
PGK1YCR012W RNY1Q02933 434 aaKnown RBP6.13□□□□□ -1.43
PGK1YCR012W ATG26Q06321 1198 aa6.13□□□□□ -1.43
PGK1YCR012W THI20Q08224 551 aa6.13□□□□□ -1.43
PGK1YCR012W MSC6Q08818 692 aaKnown RBP6.13□□□□□ -1.43
PGK1YCR012W CFT2Q12102 859 aaPredicted RBP6.13□□□□□ -1.43
PGK1YCR012W APC9Q12107 265 aa6.13□□□□□ -1.43
PGK1YCR012W GET4Q12125 312 aa6.13□□□□□ -1.43
PGK1YCR012W YDR461C-AQ2V2P7 80 aa6.13□□□□□ -1.43
PGK1YCR012W CAR1P00812 333 aaKnown RBP6.12□□□□□ -1.43
PGK1YCR012W ATP2P00830 511 aaKnown RBP6.12□□□□□ -1.43
PGK1YCR012W SEC63P14906 663 aa6.12□□□□□ -1.43
PGK1YCR012W RGR1P19263 1082 aa6.12□□□□□ -1.43
PGK1YCR012W HSP60P19882 572 aaKnown RBP6.12□□□□□ -1.43
PGK1YCR012W YCL068CP25593 260 aa6.12□□□□□ -1.43
PGK1YCR012W PUP2P32379 260 aa6.12□□□□□ -1.43
PGK1YCR012W FRE1P32791 686 aa6.12□□□□□ -1.43
PGK1YCR012W LHS1P36016 881 aa6.12□□□□□ -1.43
PGK1YCR012W PDX3P38075 228 aaKnown RBP6.12□□□□□ -1.43
PGK1YCR012W TBS1P38114 1094 aa6.12□□□□□ -1.43
PGK1YCR012W GIP1P38229 639 aa6.12□□□□□ -1.43
PGK1YCR012W SLM4P38247 162 aa6.12□□□□□ -1.43
PGK1YCR012W HSL7P38274 827 aa6.12□□□□□ -1.43
PGK1YCR012W SET2P46995 733 aaKnown RBP6.12□□□□□ -1.43
PGK1YCR012W YTP1P53584 459 aa6.12□□□□□ -1.43
PGK1YCR012W SPC2Q04969 178 aa6.12□□□□□ -1.43
PGK1YCR012W CDD1Q06549 142 aa6.12□□□□□ -1.43
PGK1YCR012W YPR097WQ06839 1073 aa6.12□□□□□ -1.43
PGK1YCR012W NRT1Q08485 598 aa6.12□□□□□ -1.43
PGK1YCR012W MCH5Q08777 521 aa6.12□□□□□ -1.43
PGK1YCR012W YEL077CQ3E7X8 1277 aa6.12□□□□□ -1.43
PGK1YCR012W YPR089WO13585 888 aa6.11□□□□□ -1.43
PGK1YCR012W COX4P04037 155 aa6.11□□□□□ -1.43
PGK1YCR012W TUB1P09733 447 aaKnown RBP6.11□□□□□ -1.43
PGK1YCR012W ATR1P13090 542 aa6.11□□□□□ -1.43
PGK1YCR012W HSC82P15108 705 aaKnown RBP6.11□□□□□ -1.43
PGK1YCR012W AMD2P22580 549 aa6.11□□□□□ -1.43
PGK1YCR012W MRPL32P25348 183 aa6.11□□□□□ -1.43
PGK1YCR012W LRE1P25579 583 aaKnown RBP6.11□□□□□ -1.43
PGK1YCR012W MSH2P25847 964 aa6.11□□□□□ -1.43
PGK1YCR012W UTR2P32623 467 aa6.11□□□□□ -1.43
PGK1YCR012W BCK2P33306 851 aa6.11□□□□□ -1.43
PGK1YCR012W YKR015CP36111 568 aa6.11□□□□□ -1.43
PGK1YCR012W LAM1P38851 1228 aa6.11□□□□□ -1.43
PGK1YCR012W NMD3P38861 518 aaKnown RBP6.11□□□□□ -1.43
PGK1YCR012W DSE1P40077 573 aa6.11□□□□□ -1.43
PGK1YCR012W TGL3P40308 642 aa6.11□□□□□ -1.43
PGK1YCR012W MPH1P40562 993 aa6.11□□□□□ -1.43
PGK1YCR012W RRT5P43607 289 aa6.11□□□□□ -1.43
PGK1YCR012W MNN11P46985 422 aaKnown RBP6.11□□□□□ -1.43
PGK1YCR012W PFD1P46988 109 aa6.11□□□□□ -1.43
PGK1YCR012W NOP9P47077 666 aaKnown RBP6.11□□□□□ -1.43
PGK1YCR012W CCT8P47079 568 aaKnown RBP6.11□□□□□ -1.43
PGK1YCR012W AZR1P50080 613 aa6.11□□□□□ -1.43
PGK1YCR012W YGR127WP53275 312 aa6.11□□□□□ -1.43
PGK1YCR012W DCP2P53550 970 aaKnown RBP6.11□□□□□ -1.43
PGK1YCR012W CUS2P53830 285 aaPredicted RBP6.11□□□□□ -1.43
PGK1YCR012W ASI1P54074 624 aa6.11□□□□□ -1.43
PGK1YCR012W VPS9P54787 451 aa6.11□□□□□ -1.43
PGK1YCR012W TMA20P89886 181 aaPredicted RBP6.11□□□□□ -1.43
PGK1YCR012W SNU56Q03782 492 aaKnown RBP6.11□□□□□ -1.43
PGK1YCR012W INP2Q03824 705 aa6.11□□□□□ -1.43
PGK1YCR012W CDC123Q05791 360 aa6.11□□□□□ -1.43
PGK1YCR012W RSC2Q06488 889 aa6.11□□□□□ -1.43
PGK1YCR012W ASA1Q06822 443 aa6.11□□□□□ -1.43
PGK1YCR012W YDL073WQ07454 984 aa6.11□□□□□ -1.43
PGK1YCR012W ENT4Q07872 247 aa6.11□□□□□ -1.43
PGK1YCR012W NSE1Q07913 336 aa6.11□□□□□ -1.43
PGK1YCR012W CBC2Q08920 208 aaKnown RBP RIP-Chip data6.11□□□□□ -1.43not detected
PGK1YCR012W SPE3Q12074 293 aaKnown RBP6.11□□□□□ -1.43
PGK1YCR012W CHS5Q12114 671 aaKnown RBP6.11□□□□□ -1.43
PGK1YCR012W TY3A-GQ12173 290 aa6.11□□□□□ -1.43
PGK1YCR012W YMR030W-AQ3E760 96 aa6.11□□□□□ -1.43
PGK1YCR012W TY3A-IQ99219 290 aa6.11□□□□□ -1.43
PGK1YCR012W RHO2P06781 192 aa6.1□□□□□ -1.43
PGK1YCR012W MST1P07236 462 aa6.1□□□□□ -1.43
PGK1YCR012W SBP1P10080 294 aaKnown RBP6.1□□□□□ -1.43
PGK1YCR012W YUR1P26725 428 aa6.1□□□□□ -1.43
PGK1YCR012W PMI40P29952 429 aaKnown RBP6.1□□□□□ -1.43
PGK1YCR012W CCR4P31384 837 aaKnown RBP6.1□□□□□ -1.43
PGK1YCR012W AGP2P38090 596 aa6.1□□□□□ -1.43
PGK1YCR012W ATG12P38316 186 aa6.1□□□□□ -1.43
PGK1YCR012W YBR259WP38338 688 aa6.1□□□□□ -1.43
PGK1YCR012W BIT2P38346 545 aa6.1□□□□□ -1.43
PGK1YCR012W GGA2P38817 585 aaKnown RBP6.1□□□□□ -1.43
PGK1YCR012W NPT1P39683 429 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms