RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeastyeast

Gene CKS1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKS1YBR135W STU1P38198 1513 aa5.47□□□□□ -1.53
CKS1YBR135W SMC4Q12267 1418 aa5.47□□□□□ -1.53
CKS1YBR135W LAM4P38800 1345 aa5.47□□□□□ -1.53
CKS1YBR135W YOR1P53049 1477 aa5.46□□□□□ -1.53
CKS1YBR135W NUC1P08466 329 aa5.46□□□□□ -1.54
CKS1YBR135W STE4P18851 423 aa5.46□□□□□ -1.54
CKS1YBR135W BET2P20133 325 aa5.46□□□□□ -1.54
CKS1YBR135W GMH1P36125 273 aa5.46□□□□□ -1.54
CKS1YBR135W NPR3P38742 1146 aa5.46□□□□□ -1.54
CKS1YBR135W FAF1P40546 346 aaPredicted RBP5.46□□□□□ -1.54
CKS1YBR135W CCT7P42943 550 aaKnown RBP5.46□□□□□ -1.54
CKS1YBR135W BNA1P47096 177 aa5.46□□□□□ -1.54
CKS1YBR135W CTR1P49573 406 aa5.46□□□□□ -1.54
CKS1YBR135W YIP4P53093 235 aa5.46□□□□□ -1.54
CKS1YBR135W GSF2Q04697 403 aaKnown RBP5.46□□□□□ -1.54
CKS1YBR135W ICL2Q12031 575 aa5.46□□□□□ -1.54
CKS1YBR135W YCR061WP25639 631 aa5.45□□□□□ -1.54
CKS1YBR135W CNE1P27825 502 aa5.45□□□□□ -1.54
CKS1YBR135W GLG1P36143 616 aa5.45□□□□□ -1.54
CKS1YBR135W CCL1P37366 393 aa5.45□□□□□ -1.54
CKS1YBR135W BDH2P39713 417 aa5.45□□□□□ -1.54
CKS1YBR135W ARB1P40024 610 aaKnown RBP5.45□□□□□ -1.54
CKS1YBR135W RAD26P40352 1085 aa5.45□□□□□ -1.54
CKS1YBR135W PSF2P40359 213 aa5.45□□□□□ -1.54
CKS1YBR135W THI6P41835 540 aa5.45□□□□□ -1.54
CKS1YBR135W BST1P43571 1029 aa5.45□□□□□ -1.54
CKS1YBR135W STB4P50104 949 aa5.45□□□□□ -1.54
CKS1YBR135W BUD17P53727 317 aa5.45□□□□□ -1.54
CKS1YBR135W ESF2P53743 316 aaKnown RBP5.45□□□□□ -1.54
CKS1YBR135W TIM44Q01852 431 aa5.45□□□□□ -1.54
CKS1YBR135W ATG21Q02887 496 aa5.45□□□□□ -1.54
CKS1YBR135W YDR179W-AQ03983 463 aa5.45□□□□□ -1.54
CKS1YBR135W GEA2P39993 1459 aaKnown RBP5.45□□□□□ -1.54
CKS1YBR135W MRPL36P36531 177 aa5.44□□□□□ -1.54
CKS1YBR135W IFA38P38286 347 aa5.44□□□□□ -1.54
CKS1YBR135W SDH8P38345 138 aa5.44□□□□□ -1.54
CKS1YBR135W PMT6P42934 759 aa5.44□□□□□ -1.54
CKS1YBR135W CTF18P49956 741 aa5.44□□□□□ -1.54
CKS1YBR135W SLI1P53304 468 aa5.44□□□□□ -1.54
CKS1YBR135W OPY2Q06810 360 aa5.44□□□□□ -1.54
CKS1YBR135W YPL216WQ08964 1102 aa5.44□□□□□ -1.54
CKS1YBR135W TAF3Q12297 353 aa5.44□□□□□ -1.54
CKS1YBR135W SPP41P38904 1435 aa5.43□□□□□ -1.54
CKS1YBR135W RRN3P36070 627 aa5.43□□□□□ -1.54
CKS1YBR135W YJL206CP39529 758 aa5.43□□□□□ -1.54
CKS1YBR135W SDS3P40505 327 aa5.43□□□□□ -1.54
CKS1YBR135W RRT6P53117 311 aaPredicted RBP5.43□□□□□ -1.54
CKS1YBR135W TRS23Q03784 219 aa5.43□□□□□ -1.54
CKS1YBR135W TMA64Q04600 565 aaKnown RBP5.43□□□□□ -1.54
CKS1YBR135W CSR1Q06705 408 aaKnown RBP5.43□□□□□ -1.54
CKS1YBR135W NEW1Q08972 1196 aaKnown RBP5.43□□□□□ -1.54
CKS1YBR135W SNF1P06782 633 aaKnown RBP5.42□□□□□ -1.54
CKS1YBR135W CDC5P32562 705 aa5.42□□□□□ -1.54
CKS1YBR135W LOT5P34234 306 aa5.42□□□□□ -1.54
CKS1YBR135W OAR1P35731 278 aa5.42□□□□□ -1.54
CKS1YBR135W MIT1P40002 666 aa5.42□□□□□ -1.54
CKS1YBR135W SPC98P53540 846 aa5.42□□□□□ -1.54
CKS1YBR135W CTF4Q01454 927 aa5.42□□□□□ -1.54
CKS1YBR135W YPL108WQ02872 168 aaPredicted RBP5.42□□□□□ -1.54
CKS1YBR135W NGL2Q03264 515 aaKnown RBP5.42□□□□□ -1.54
CKS1YBR135W VID22Q05934 901 aa5.42□□□□□ -1.54
CKS1YBR135W SUL2Q12325 893 aa5.42□□□□□ -1.54
CKS1YBR135W NTE1Q04958 1679 aa5.41□□□□□ -1.54
CKS1YBR135W PET122P10355 254 aa5.41□□□□□ -1.54
CKS1YBR135W MCM10P32354 571 aa5.41□□□□□ -1.54
CKS1YBR135W SLC1P33333 303 aa5.41□□□□□ -1.54
CKS1YBR135W YPT10P38146 199 aa5.41□□□□□ -1.54
CKS1YBR135W MOH1P38191 138 aa5.41□□□□□ -1.54
CKS1YBR135W KAP123P40069 1113 aaKnown RBP5.41□□□□□ -1.54
CKS1YBR135W MEP3P53390 489 aa5.41□□□□□ -1.54
CKS1YBR135W CRF1Q04930 467 aa5.41□□□□□ -1.54
CKS1YBR135W TGS1Q12052 315 aa5.41□□□□□ -1.54
CKS1YBR135W NUP159P40477 1460 aa5.4□□□□□ -1.54
CKS1YBR135W RER1P25560 188 aa5.4□□□□□ -1.54
CKS1YBR135W RPT3P33298 428 aaKnown RBP5.4□□□□□ -1.54
CKS1YBR135W YMC2P38087 329 aa5.4□□□□□ -1.54
CKS1YBR135W PIH1P38768 344 aa5.4□□□□□ -1.54
CKS1YBR135W AXL2P38928 823 aa5.4□□□□□ -1.54
CKS1YBR135W SAP4P53036 818 aa5.4□□□□□ -1.54
CKS1YBR135W TAM41P53230 385 aa5.4□□□□□ -1.54
CKS1YBR135W YDL073WQ07454 984 aa5.4□□□□□ -1.54
CKS1YBR135W VAM6Q07468 1049 aa5.4□□□□□ -1.54
CKS1YBR135W TSC11P40061 1430 aa5.4□□□□□ -1.55
CKS1YBR135W VTH1P40438 1549 aa5.39□□□□□ -1.55
CKS1YBR135W VTH2P40890 1549 aa5.39□□□□□ -1.55
CKS1YBR135W GUK1P15454 187 aaKnown RBP5.39□□□□□ -1.55
CKS1YBR135W RAD16P31244 790 aa5.39□□□□□ -1.55
CKS1YBR135W PSP1P50896 841 aaKnown RBP5.39□□□□□ -1.55
CKS1YBR135W YNL092WP53934 400 aa5.39□□□□□ -1.55
CKS1YBR135W TMN2Q04562 672 aa5.39□□□□□ -1.55
CKS1YBR135W TRM8Q12009 286 aa5.39□□□□□ -1.55
CKS1YBR135W VPS15P22219 1454 aa5.39□□□□□ -1.55
CKS1YBR135W LEU2P04173 364 aaPredicted RBP5.38□□□□□ -1.55
CKS1YBR135W KIN3P22209 435 aa5.38□□□□□ -1.55
CKS1YBR135W ARO9P38840 513 aaPredicted RBP5.38□□□□□ -1.55
CKS1YBR135W GND2P53319 492 aa5.38□□□□□ -1.55
CKS1YBR135W YMR018WQ04364 514 aa5.38□□□□□ -1.55
CKS1YBR135W MRN1Q08925 612 aaKnown RBP RIP-Chip data5.38□□□□□ -1.55not detected
CKS1YBR135W COX17Q12287 69 aa5.38□□□□□ -1.55
CKS1YBR135W MDM20Q12387 796 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms