RNA–Protein interactions for RNA: YBL067C

UBP13, Transcript of Ubiquitin-specific protease that cleaves Ub-protein fusions, yeast

Gene UBP13, Length 2,244 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP13	YBL067C	YLR149C	Q99296	730 aa		7.31	□□□□□ -1.24
UBP13	YBL067C	TDH1	P00360	332 aa	Known RBP	7.31	□□□□□ -1.24
UBP13	YBL067C	ARG81	P05085	880 aa		7.31	□□□□□ -1.24
UBP13	YBL067C	PET111	P08468	800 aa		7.31	□□□□□ -1.24
UBP13	YBL067C	CBS1	P14066	229 aa		7.31	□□□□□ -1.24
UBP13	YBL067C	BCK2	P33306	851 aa		7.31	□□□□□ -1.24
UBP13	YBL067C	SDS22	P36047	338 aa		7.31	□□□□□ -1.24
UBP13	YBL067C	YJR124C	P47159	448 aa		7.31	□□□□□ -1.24
UBP13	YBL067C	RAD30	Q04049	632 aa		7.31	□□□□□ -1.24
UBP13	YBL067C	TY1A-DR3	Q12441	440 aa		7.31	□□□□□ -1.24
UBP13	YBL067C	SEC53	P07283	254 aa	Known RBP	7.3	□□□□□ -1.24
UBP13	YBL067C	PRP6	P19735	899 aa	Predicted RBP	7.3	□□□□□ -1.24
UBP13	YBL067C	CPR2	P23285	205 aa		7.3	□□□□□ -1.24
UBP13	YBL067C	RIT1	P23796	513 aa		7.3	□□□□□ -1.24
UBP13	YBL067C	SRB2	P34162	210 aa		7.3	□□□□□ -1.24
UBP13	YBL067C	YBL086C	P38177	466 aa		7.3	□□□□□ -1.24
UBP13	YBL067C	PRM2	P40534	656 aa		7.3	□□□□□ -1.24
UBP13	YBL067C	JJJ2	P46997	583 aa		7.3	□□□□□ -1.24
UBP13	YBL067C	ALY2	P47029	1046 aa		7.3	□□□□□ -1.24
UBP13	YBL067C	YKE2	P52553	114 aa		7.3	□□□□□ -1.24
UBP13	YBL067C	VID30	P53076	958 aa		7.3	□□□□□ -1.24
UBP13	YBL067C	PIB2	P53191	635 aa		7.3	□□□□□ -1.24
UBP13	YBL067C	BRE5	P53741	515 aa	Known RBP	7.3	□□□□□ -1.24
UBP13	YBL067C	ACS1	Q01574	713 aa		7.3	□□□□□ -1.24
UBP13	YBL067C	JIP3	O13555	125 aa		7.29	□□□□□ -1.24
UBP13	YBL067C	HTS1	P07263	546 aa	Known RBP	7.29	□□□□□ -1.24
UBP13	YBL067C	EST1	P17214	699 aa	Predicted RBP	7.29	□□□□□ -1.24
UBP13	YBL067C	PHO84	P25297	587 aa	Known RBP	7.29	□□□□□ -1.24
UBP13	YBL067C	YCR051W	P25631	222 aa		7.29	□□□□□ -1.24
UBP13	YBL067C	YMR124W	P39523	943 aa	Known RBP	7.29	□□□□□ -1.24
UBP13	YBL067C	GPB2	P39717	880 aa		7.29	□□□□□ -1.24
UBP13	YBL067C	FLC2	P39719	783 aa		7.29	□□□□□ -1.24
UBP13	YBL067C	YJL045W	P47052	634 aa		7.29	□□□□□ -1.24
UBP13	YBL067C	ASE1	P50275	885 aa		7.29	□□□□□ -1.24
UBP13	YBL067C	ARP5	P53946	755 aa		7.29	□□□□□ -1.24
UBP13	YBL067C	ZRT2	Q12436	422 aa		7.29	□□□□□ -1.24
UBP13	YBL067C	YGL015C	P33199	130 aa		7.29	□□□□□ -1.24
UBP13	YBL067C	SSZ1	P38788	538 aa	Known RBP	7.29	□□□□□ -1.24
UBP13	YBL067C	UME6	P39001	836 aa		7.29	□□□□□ -1.24
UBP13	YBL067C	PXA1	P41909	870 aa		7.29	□□□□□ -1.24
UBP13	YBL067C	BPL1	P48445	690 aa	Predicted RBP	7.29	□□□□□ -1.24
UBP13	YBL067C	SKP1	P52286	194 aa		7.29	□□□□□ -1.24
UBP13	YBL067C	OGG1	P53397	376 aa	Predicted RBP	7.29	□□□□□ -1.24
UBP13	YBL067C	RPA49	Q01080	415 aa	Predicted RBP	7.29	□□□□□ -1.24
UBP13	YBL067C	COX17	Q12287	69 aa		7.29	□□□□□ -1.24
UBP13	YBL067C	SKM1	Q12469	655 aa		7.29	□□□□□ -1.24
UBP13	YBL067C	GAL7	P08431	366 aa		7.28	□□□□□ -1.24
UBP13	YBL067C	CDC42	P19073	191 aa		7.28	□□□□□ -1.24
UBP13	YBL067C	OCA4	P25366	362 aa		7.28	□□□□□ -1.24
UBP13	YBL067C	MDL2	P33311	773 aa		7.28	□□□□□ -1.24
UBP13	YBL067C	TPO5	P36029	618 aa		7.28	□□□□□ -1.24
UBP13	YBL067C	RPN10	P38886	268 aa	Known RBP	7.28	□□□□□ -1.24
UBP13	YBL067C	MNL1	P38888	796 aa		7.28	□□□□□ -1.24
UBP13	YBL067C	BEM4	P39011	633 aa		7.28	□□□□□ -1.24
UBP13	YBL067C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	7.28	□□□□□ -1.24	not detected
UBP13	YBL067C	SSU1	P41930	458 aa		7.28	□□□□□ -1.24
UBP13	YBL067C	YFL054C	P43549	646 aa		7.28	□□□□□ -1.24
UBP13	YBL067C	ARC1	P46672	376 aa	Known RBP	7.28	□□□□□ -1.24
UBP13	YBL067C	TRF5	P48561	642 aa	Known RBP	7.28	□□□□□ -1.24
UBP13	YBL067C	SPP1	Q03012	353 aa		7.28	□□□□□ -1.24
UBP13	YBL067C	RRB1	Q04225	511 aa	Known RBP	7.28	□□□□□ -1.24
UBP13	YBL067C	PUS5	Q06244	254 aa		7.28	□□□□□ -1.24
UBP13	YBL067C	GGA1	Q06336	557 aa		7.28	□□□□□ -1.24
UBP13	YBL067C	GIS3	Q12418	502 aa		7.28	□□□□□ -1.24
UBP13	YBL067C	BUD5	P25300	642 aa	Predicted RBP	7.28	□□□□□ -1.24
UBP13	YBL067C	SRB4	P32569	687 aa		7.28	□□□□□ -1.24
UBP13	YBL067C	MET28	P40573	187 aa		7.28	□□□□□ -1.24
UBP13	YBL067C	ALK1	P43633	760 aa	Known RBP	7.28	□□□□□ -1.24
UBP13	YBL067C	PAN2	P53010	1115 aa	Predicted RBP	7.28	□□□□□ -1.24
UBP13	YBL067C	EFM5	P53200	248 aa	Known RBP	7.28	□□□□□ -1.24
UBP13	YBL067C	YNL247W	P53852	767 aa	Known RBP	7.28	□□□□□ -1.24
UBP13	YBL067C	SMA1	Q02651	245 aa		7.28	□□□□□ -1.24
UBP13	YBL067C	YLR407W	Q06070	228 aa		7.28	□□□□□ -1.24
UBP13	YBL067C	YPS7	Q06325	596 aa		7.28	□□□□□ -1.24
UBP13	YBL067C	ARR1	Q06596	294 aa		7.28	□□□□□ -1.24
UBP13	YBL067C	TCO89	Q08921	799 aa		7.28	□□□□□ -1.24
UBP13	YBL067C	UBX3	Q12229	455 aa		7.28	□□□□□ -1.24
UBP13	YBL067C	SPE4	Q12455	300 aa		7.28	□□□□□ -1.24
UBP13	YBL067C	YOR111W	Q99210	232 aa		7.28	□□□□□ -1.24
UBP13	YBL067C	YKL023W	P36103	277 aa	Known RBP	7.27	□□□□□ -1.25
UBP13	YBL067C	YHR054C	P38780	354 aa		7.27	□□□□□ -1.25
UBP13	YBL067C	INP51	P40559	946 aa	Known RBP	7.27	□□□□□ -1.25
UBP13	YBL067C	ROK1	P45818	564 aa	Predicted RBP	7.27	□□□□□ -1.25
UBP13	YBL067C	PTK2	P47116	818 aa	Known RBP	7.27	□□□□□ -1.25
UBP13	YBL067C	IMA1	P53051	589 aa		7.27	□□□□□ -1.25
UBP13	YBL067C	CUE3	P53137	624 aa	Known RBP	7.27	□□□□□ -1.25
UBP13	YBL067C	GIM3	P53900	129 aa		7.27	□□□□□ -1.25
UBP13	YBL067C	RBD2	Q12270	262 aa		7.27	□□□□□ -1.25
UBP13	YBL067C	YML002W	P0CF17	737 aa		7.27	□□□□□ -1.25
UBP13	YBL067C	UBP11	P36026	717 aa		7.27	□□□□□ -1.25
UBP13	YBL067C	LUC7	Q07508	261 aa	Predicted RBP	7.27	□□□□□ -1.25
UBP13	YBL067C	SWT1	Q12104	458 aa		7.27	□□□□□ -1.25
UBP13	YBL067C	HUA2	Q12134	243 aa		7.27	□□□□□ -1.25
UBP13	YBL067C	AFI1	Q99222	893 aa		7.27	□□□□□ -1.25
UBP13	YBL067C	ARP2	P32381	391 aa	Known RBP	7.26	□□□□□ -1.25
UBP13	YBL067C	PXL1	P36166	706 aa		7.26	□□□□□ -1.25
UBP13	YBL067C	PIH1	P38768	344 aa		7.26	□□□□□ -1.25
UBP13	YBL067C	RGI2	P40188	164 aa		7.26	□□□□□ -1.25
UBP13	YBL067C	UTP18	P40362	594 aa	Predicted RBP	7.26	□□□□□ -1.25
UBP13	YBL067C	RLP7	P40693	322 aa	Known RBP	7.26	□□□□□ -1.25

Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms