RNA–Protein interactions for RNA: YBL054W

TOD6, Transcript of PAC motif binding protein involved in rRNA and ribosome biogenesis, yeastyeast

Gene TOD6, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOD6YBL054W MF(ALPHA)1P01149 165 aa7.29□□□□□ -1.24
TOD6YBL054W KSS1P14681 368 aa7.29□□□□□ -1.24
TOD6YBL054W HSP60P19882 572 aaKnown RBP7.29□□□□□ -1.24
TOD6YBL054W CLN1P20437 546 aa7.29□□□□□ -1.24
TOD6YBL054W SPB1P25582 841 aaPredicted RBP7.29□□□□□ -1.24
TOD6YBL054W UGA4P32837 571 aa7.29□□□□□ -1.24
TOD6YBL054W TYE7P33122 291 aaPredicted RBP7.29□□□□□ -1.24
TOD6YBL054W UBP11P36026 717 aa7.29□□□□□ -1.24
TOD6YBL054W YBR139WP38109 508 aa7.29□□□□□ -1.24
TOD6YBL054W BZZ1P38822 633 aa7.29□□□□□ -1.24
TOD6YBL054W AVT6P40074 448 aa7.29□□□□□ -1.24
TOD6YBL054W ATP22P50273 684 aaPredicted RBP7.29□□□□□ -1.24
TOD6YBL054W NOP19P53317 196 aaPredicted RBP7.29□□□□□ -1.24
TOD6YBL054W LOT6Q07923 191 aa7.29□□□□□ -1.24
TOD6YBL054W LAP2Q10740 671 aa7.29□□□□□ -1.24
TOD6YBL054W APC9Q12107 265 aa7.29□□□□□ -1.24
TOD6YBL054W KCS1Q12494 1050 aa7.29□□□□□ -1.24
TOD6YBL054W APM4Q99186 491 aa7.29□□□□□ -1.24
TOD6YBL054W ECM3Q99252 613 aa7.29□□□□□ -1.24
TOD6YBL054W RHO1P06780 209 aaKnown RBP7.29□□□□□ -1.24
TOD6YBL054W RSR1P13856 272 aa7.29□□□□□ -1.24
TOD6YBL054W CDC42P19073 191 aa7.29□□□□□ -1.24
TOD6YBL054W SIT4P20604 311 aa7.29□□□□□ -1.24
TOD6YBL054W RET1P22276 1149 aaKnown RBP7.29□□□□□ -1.24
TOD6YBL054W VAC17P25591 423 aa7.29□□□□□ -1.24
TOD6YBL054W MSH2P25847 964 aa7.29□□□□□ -1.24
TOD6YBL054W RME1P32338 300 aaKnown RBP7.29□□□□□ -1.24
TOD6YBL054W RPS0AP32905 252 aaKnown RBP7.29□□□□□ -1.24
TOD6YBL054W YPK3P38070 525 aa7.29□□□□□ -1.24
TOD6YBL054W PCM1P38628 557 aaKnown RBP7.29□□□□□ -1.24
TOD6YBL054W CKB2P38930 258 aa7.29□□□□□ -1.24
TOD6YBL054W SEC31P38968 1273 aaKnown RBP7.29□□□□□ -1.24
TOD6YBL054W DLD3P39976 496 aaKnown RBP7.29□□□□□ -1.24
TOD6YBL054W NPP2P39997 493 aa7.29□□□□□ -1.24
TOD6YBL054W LEM3P42838 414 aa7.29□□□□□ -1.24
TOD6YBL054W RMR1P53060 241 aa7.29□□□□□ -1.24
TOD6YBL054W PUS2P53167 370 aa7.29□□□□□ -1.24
TOD6YBL054W SVF1Q05515 481 aa7.29□□□□□ -1.24
TOD6YBL054W YCS4Q06156 1176 aa7.29□□□□□ -1.24
TOD6YBL054W ACK1Q07622 623 aaPredicted RBP7.29□□□□□ -1.24
TOD6YBL054W SOG2Q08817 791 aa7.29□□□□□ -1.24
TOD6YBL054W LSO1Q3E827 93 aa7.29□□□□□ -1.24
TOD6YBL054W RGS2Q99188 309 aa7.29□□□□□ -1.24
TOD6YBL054W NHA1Q99271 985 aa7.29□□□□□ -1.24
TOD6YBL054W AI5_ALPHAQ9ZZX1 630 aa7.29□□□□□ -1.24
TOD6YBL054W CAR1P00812 333 aaKnown RBP7.28□□□□□ -1.24
TOD6YBL054W FAR1P21268 830 aa7.28□□□□□ -1.24
TOD6YBL054W YCR016WP25617 290 aaKnown RBP7.28□□□□□ -1.24
TOD6YBL054W MEI4P29467 408 aa7.28□□□□□ -1.24
TOD6YBL054W URA10P30402 227 aa7.28□□□□□ -1.24
TOD6YBL054W SEC1P30619 724 aaKnown RBP7.28□□□□□ -1.24
TOD6YBL054W ACH1P32316 526 aa7.28□□□□□ -1.24
TOD6YBL054W CYS4P32582 507 aaKnown RBP7.28□□□□□ -1.24
TOD6YBL054W GDA1P32621 518 aa7.28□□□□□ -1.24
TOD6YBL054W DOM34P33309 386 aa7.28□□□□□ -1.24
TOD6YBL054W DUR3P33413 735 aa7.28□□□□□ -1.24
TOD6YBL054W VTC4P47075 721 aa7.28□□□□□ -1.24
TOD6YBL054W COP1P53622 1201 aaKnown RBP7.28□□□□□ -1.24
TOD6YBL054W CUS2P53830 285 aaPredicted RBP7.28□□□□□ -1.24
TOD6YBL054W PHM6Q05637 104 aa7.28□□□□□ -1.24
TOD6YBL054W RSA1Q08932 381 aa7.28□□□□□ -1.24
TOD6YBL054W HSH49Q99181 213 aaPredicted RBP7.28□□□□□ -1.24
TOD6YBL054W RPN13O13563 156 aa7.27□□□□□ -1.25
TOD6YBL054W YER152CP10356 443 aa7.27□□□□□ -1.25
TOD6YBL054W RAD18P10862 487 aa7.27□□□□□ -1.25
TOD6YBL054W FBA1P14540 359 aaKnown RBP7.27□□□□□ -1.25
TOD6YBL054W PMA2P19657 947 aa7.27□□□□□ -1.25
TOD6YBL054W VPS3P23643 1011 aa7.27□□□□□ -1.25
TOD6YBL054W VMA6P32366 345 aaKnown RBP7.27□□□□□ -1.25
TOD6YBL054W PHA2P32452 334 aa7.27□□□□□ -1.25
TOD6YBL054W NGG1P32494 702 aa7.27□□□□□ -1.25
TOD6YBL054W ATG19P35193 415 aa7.27□□□□□ -1.25
TOD6YBL054W DMA1P38823 416 aa7.27□□□□□ -1.25
TOD6YBL054W FCY21P40039 528 aa7.27□□□□□ -1.25
TOD6YBL054W VHR1P40522 640 aa7.27□□□□□ -1.25
TOD6YBL054W RPN11P43588 306 aaKnown RBP7.27□□□□□ -1.25
TOD6YBL054W IRC6P43615 237 aa7.27□□□□□ -1.25
TOD6YBL054W GPI1P53306 609 aa7.27□□□□□ -1.25
TOD6YBL054W SLU7Q02775 382 aaKnown RBP7.27□□□□□ -1.25
TOD6YBL054W TAF11Q04226 346 aa7.27□□□□□ -1.25
TOD6YBL054W ENT4Q07872 247 aa7.27□□□□□ -1.25
TOD6YBL054W RSB1Q08417 382 aa7.27□□□□□ -1.25
TOD6YBL054W MNL2Q12205 849 aa7.27□□□□□ -1.25
TOD6YBL054W PHR1P05066 565 aaKnown RBP RIP-Chip data7.26□□□□□ -1.25not detected
TOD6YBL054W RHO2P06781 192 aa7.26□□□□□ -1.25
TOD6YBL054W MSS18P08593 268 aa7.26□□□□□ -1.25
TOD6YBL054W RAP1P11938 827 aa7.26□□□□□ -1.25
TOD6YBL054W MRP13P12686 339 aa7.26□□□□□ -1.25
TOD6YBL054W AMS1P22855 1083 aa7.26□□□□□ -1.25
TOD6YBL054W CTR86P25355 563 aa7.26□□□□□ -1.25
TOD6YBL054W ATP7P30902 174 aa7.26□□□□□ -1.25
TOD6YBL054W AEP1P32493 518 aa7.26□□□□□ -1.25
TOD6YBL054W PEX6P33760 1030 aa7.26□□□□□ -1.25
TOD6YBL054W MUM2P38236 366 aa7.26□□□□□ -1.25
TOD6YBL054W TDP1P38319 544 aa7.26□□□□□ -1.25
TOD6YBL054W MGS1P40151 587 aa7.26□□□□□ -1.25
TOD6YBL054W YRB2P40517 327 aa7.26□□□□□ -1.25
TOD6YBL054W SNZ3P43545 298 aa7.26□□□□□ -1.25
TOD6YBL054W YFL040WP43562 540 aa7.26□□□□□ -1.25
TOD6YBL054W PEX8P53248 589 aa7.26□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms