RNA–Protein interactions for RNA: YAL002W

VPS8, Transcript of Membrane-binding component of the CORVET complex, yeastyeast

Gene VPS8, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS8YAL002W YIL166CP40445 542 aa2.22□□□□□ -2.05
VPS8YAL002W TAH11P47112 604 aa2.22□□□□□ -2.05
VPS8YAL002W PUS4P48567 403 aaKnown RBP2.22□□□□□ -2.05
VPS8YAL002W MAK10Q02197 733 aa2.22□□□□□ -2.05
VPS8YAL002W MFM1Q02783 413 aa2.22□□□□□ -2.05
VPS8YAL002W YPL108WQ02872 168 aaPredicted RBP2.22□□□□□ -2.05
VPS8YAL002W YAP6Q03935 383 aa2.22□□□□□ -2.05
VPS8YAL002W YKU80Q04437 629 aa2.22□□□□□ -2.05
VPS8YAL002W TDA9Q04545 1251 aa2.22□□□□□ -2.05
VPS8YAL002W RPP2AP05319 106 aaKnown RBP2.21□□□□□ -2.06
VPS8YAL002W SNF1P06782 633 aaKnown RBP2.21□□□□□ -2.06
VPS8YAL002W SEC53P07283 254 aaKnown RBP2.21□□□□□ -2.06
VPS8YAL002W ARG1P22768 420 aa2.21□□□□□ -2.06
VPS8YAL002W PRP22P24384 1145 aaKnown RBP2.21□□□□□ -2.06
VPS8YAL002W REG2P38232 338 aa2.21□□□□□ -2.06
VPS8YAL002W COS111P38308 924 aa2.21□□□□□ -2.06
VPS8YAL002W RPP1P38786 293 aa2.21□□□□□ -2.06
VPS8YAL002W PRM2P40534 656 aa2.21□□□□□ -2.06
VPS8YAL002W AXL1P40851 1208 aa2.21□□□□□ -2.06
VPS8YAL002W SPO1P53541 631 aa2.21□□□□□ -2.06
VPS8YAL002W ARC35P53731 342 aaKnown RBP2.21□□□□□ -2.06
VPS8YAL002W BSC5P53755 489 aa2.21□□□□□ -2.06
VPS8YAL002W REC102Q02721 264 aa2.21□□□□□ -2.06
VPS8YAL002W RCR2Q03446 210 aaKnown RBP2.21□□□□□ -2.06
VPS8YAL002W YDR341CQ05506 607 aaKnown RBP2.21□□□□□ -2.06
VPS8YAL002W YDR286CQ05530 114 aa2.21□□□□□ -2.06
VPS8YAL002W ICL2Q12031 575 aa2.21□□□□□ -2.06
VPS8YAL002W SMC6Q12749 1114 aa2.21□□□□□ -2.06
VPS8YAL002W YBR126W-AQ8TGU7 68 aa2.21□□□□□ -2.06
VPS8YAL002W YSP2Q06681 1438 aa2.21□□□□□ -2.06
VPS8YAL002W NAT1P12945 854 aaKnown RBP2.21□□□□□ -2.06
VPS8YAL002W VMA2P16140 517 aaKnown RBP2.21□□□□□ -2.06
VPS8YAL002W RPC53P25441 422 aa2.21□□□□□ -2.06
VPS8YAL002W PFK26P40433 827 aaKnown RBP2.21□□□□□ -2.06
VPS8YAL002W MSC2Q03455 724 aa2.21□□□□□ -2.06
VPS8YAL002W TGL5Q12043 749 aa2.21□□□□□ -2.06
VPS8YAL002W YLR122CQ12312 125 aa2.21□□□□□ -2.06
VPS8YAL002W SFI1Q12369 946 aa2.21□□□□□ -2.06
VPS8YAL002W NPC2Q12408 173 aa2.21□□□□□ -2.06
VPS8YAL002W CEX1Q12453 761 aa2.21□□□□□ -2.06
VPS8YAL002W PNO1Q99216 274 aaKnown RBP2.21□□□□□ -2.06
VPS8YAL002W ATP2P00830 511 aaKnown RBP2.21□□□□□ -2.06
VPS8YAL002W SES1P07284 462 aaKnown RBP2.21□□□□□ -2.06
VPS8YAL002W MTF2P10849 440 aa2.21□□□□□ -2.06
VPS8YAL002W CDC26P14724 124 aa2.21□□□□□ -2.06
VPS8YAL002W MET8P15807 274 aa2.21□□□□□ -2.06
VPS8YAL002W RNR1P21524 888 aaKnown RBP2.21□□□□□ -2.06
VPS8YAL002W PET127P32606 800 aa2.21□□□□□ -2.06
VPS8YAL002W RMA1P36001 430 aaKnown RBP2.21□□□□□ -2.06
VPS8YAL002W BYE1P36106 594 aa2.21□□□□□ -2.06
VPS8YAL002W BEM4P39011 633 aa2.21□□□□□ -2.06
VPS8YAL002W ARF3P40994 183 aaRIP-Chip data2.21□□□□□ -2.06not detected
VPS8YAL002W CIR1P42940 261 aa2.21□□□□□ -2.06
VPS8YAL002W YLH47Q06493 454 aa2.21□□□□□ -2.06
VPS8YAL002W RXT3Q07458 294 aa2.21□□□□□ -2.06
VPS8YAL002W YDR215CQ12240 137 aa2.21□□□□□ -2.06
VPS8YAL002W ZRT2Q12436 422 aa2.21□□□□□ -2.06
VPS8YAL002W ERG27Q12452 347 aaKnown RBP2.21□□□□□ -2.06
VPS8YAL002W YLR415CO13578 112 aa2.2□□□□□ -2.06
VPS8YAL002W CDC16P09798 840 aa2.2□□□□□ -2.06
VPS8YAL002W PDX1P16451 410 aa2.2□□□□□ -2.06
VPS8YAL002W ERG6P25087 383 aaKnown RBP2.2□□□□□ -2.06
VPS8YAL002W YCL049CP25577 312 aa2.2□□□□□ -2.06
VPS8YAL002W POL4P25615 582 aa2.2□□□□□ -2.06
VPS8YAL002W SIP1P32578 815 aa2.2□□□□□ -2.06
VPS8YAL002W YBR138CP38277 524 aa2.2□□□□□ -2.06
VPS8YAL002W CBR1P38626 284 aaKnown RBP2.2□□□□□ -2.06
VPS8YAL002W CCT3P39077 534 aaKnown RBP2.2□□□□□ -2.06
VPS8YAL002W YJR061WP40355 935 aa2.2□□□□□ -2.06
VPS8YAL002W DJP1P40564 432 aa2.2□□□□□ -2.06
VPS8YAL002W NNF2P53253 936 aa2.2□□□□□ -2.06
VPS8YAL002W TIM11P81449 96 aaPredicted RBP2.2□□□□□ -2.06
VPS8YAL002W IWR1Q07532 353 aaPredicted RBP2.2□□□□□ -2.06
VPS8YAL002W ENT4Q07872 247 aa2.2□□□□□ -2.06
VPS8YAL002W PGA3Q12746 312 aaKnown RBP2.2□□□□□ -2.06
VPS8YAL002W USO1P25386 1790 aa2.2□□□□□ -2.06
VPS8YAL002W MET17P06106 444 aa2.2□□□□□ -2.06
VPS8YAL002W MET3P08536 511 aa2.2□□□□□ -2.06
VPS8YAL002W ILS1P09436 1072 aaKnown RBP2.2□□□□□ -2.06
VPS8YAL002W SRV2P17555 526 aaKnown RBP2.2□□□□□ -2.06
VPS8YAL002W SEC21P32074 935 aaKnown RBP2.2□□□□□ -2.06
VPS8YAL002W MAL33P38157 468 aa2.2□□□□□ -2.06
VPS8YAL002W YHR112CP38716 378 aa2.2□□□□□ -2.06
VPS8YAL002W UTP9P38882 575 aaKnown RBP2.2□□□□□ -2.06
VPS8YAL002W TPA1P40032 644 aaKnown RBP2.2□□□□□ -2.06
VPS8YAL002W PRP43P53131 767 aaKnown RBP2.2□□□□□ -2.06
VPS8YAL002W YPL034WQ03083 165 aa2.2□□□□□ -2.06
VPS8YAL002W CRF1Q04930 467 aa2.2□□□□□ -2.06
VPS8YAL002W TFC6Q06339 672 aa2.2□□□□□ -2.06
VPS8YAL002W NBP2Q12163 236 aa2.2□□□□□ -2.06
VPS8YAL002W RIB2Q12362 591 aaKnown RBP2.2□□□□□ -2.06
VPS8YAL002W RVB2Q12464 471 aaKnown RBP2.2□□□□□ -2.06
VPS8YAL002W APE3P37302 537 aaKnown RBP2.2□□□□□ -2.06
VPS8YAL002W YBR259WP38338 688 aa2.2□□□□□ -2.06
VPS8YAL002W LSM5P40089 93 aaKnown RBP2.2□□□□□ -2.06
VPS8YAL002W YIL161WP40449 235 aaKnown RBP2.2□□□□□ -2.06
VPS8YAL002W MTL1P53214 551 aa2.2□□□□□ -2.06
VPS8YAL002W ART5P53244 586 aaKnown RBP2.2□□□□□ -2.06
VPS8YAL002W YNR071CP53757 342 aa2.2□□□□□ -2.06
VPS8YAL002W ASI2P53895 289 aa2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms