RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 TEF4P36008 412 aaKnown RBP9.3□□□□□ -0.92
NME1NME1 TPK1P06244 397 aa9.29□□□□□ -0.92
NME1NME1 GFD2P25370 566 aaKnown RBP9.29□□□□□ -0.92
NME1NME1 CDC5P32562 705 aa9.29□□□□□ -0.92
NME1NME1 MOH1P38191 138 aa9.29□□□□□ -0.92
NME1NME1 ZAP1P47043 880 aa9.29□□□□□ -0.92
NME1NME1 TFC6Q06339 672 aa9.29□□□□□ -0.92
NME1NME1 COX17Q12287 69 aa9.28□□□□□ -0.92
NME1NME1 YER175W-AQ8TGU4 54 aa9.28□□□□□ -0.92
NME1NME1 YPK1P12688 680 aaKnown RBP9.27□□□□□ -0.93
NME1NME1 NUP120P35729 1037 aa9.27□□□□□ -0.93
NME1NME1 RRT6P53117 311 aaPredicted RBP9.27□□□□□ -0.93
NME1NME1 TRM8Q12009 286 aa9.27□□□□□ -0.93
NME1NME1 PNS1Q12412 539 aa9.27□□□□□ -0.93
NME1NME1 CHS3P29465 1165 aa9.26□□□□□ -0.93
NME1NME1 MEP3P53390 489 aa9.26□□□□□ -0.93
NME1NME1 CRT10Q08226 957 aa9.26□□□□□ -0.93
NME1NME1 ZPS1Q12512 249 aa9.26□□□□□ -0.93
NME1NME1 AAC1P04710 309 aa9.25□□□□□ -0.93
NME1NME1 PDE1P22434 369 aa9.25□□□□□ -0.93
NME1NME1 CNS1P33313 385 aa9.25□□□□□ -0.93
NME1NME1 YMC2P38087 329 aa9.25□□□□□ -0.93
NME1NME1 AXL2P38928 823 aa9.25□□□□□ -0.93
NME1NME1 GND2P53319 492 aa9.25□□□□□ -0.93
NME1NME1 WHI2P12611 486 aa9.24□□□□□ -0.93
NME1NME1 GUK1P15454 187 aaKnown RBP9.24□□□□□ -0.93
NME1NME1 MIT1P40002 666 aa9.24□□□□□ -0.93
NME1NME1 YER010CP40011 234 aa9.24□□□□□ -0.93
NME1NME1 MNT3P40549 630 aa9.24□□□□□ -0.93
NME1NME1 TAM41P53230 385 aa9.24□□□□□ -0.93
NME1NME1 SLI1P53304 468 aa9.24□□□□□ -0.93
NME1NME1 COQ6P53318 479 aa9.24□□□□□ -0.93
NME1NME1 GFD1Q04839 188 aaKnown RBP9.24□□□□□ -0.93
NME1NME1 MRH1Q12117 320 aaPredicted RBP9.24□□□□□ -0.93
NME1NME1 YPT10P38146 199 aa9.23□□□□□ -0.93
NME1NME1 PSP1P50896 841 aaKnown RBP9.23□□□□□ -0.93
NME1NME1 MTG1Q03151 367 aaPredicted RBP9.23□□□□□ -0.93
NME1NME1 TMN2Q04562 672 aa9.23□□□□□ -0.93
NME1NME1 VAM6Q07468 1049 aa9.23□□□□□ -0.93
NME1NME1 YBR255C-AQ3E776 120 aa9.23□□□□□ -0.93
NME1NME1 PNO1Q99216 274 aaKnown RBP9.23□□□□□ -0.93
NME1NME1 TPK2P06245 380 aa9.22□□□□□ -0.93
NME1NME1 ARO9P38840 513 aaPredicted RBP9.22□□□□□ -0.93
NME1NME1 PCD1Q12524 340 aa9.22□□□□□ -0.93
NME1NME1 ATP2P00830 511 aaKnown RBP9.21□□□□□ -0.94
NME1NME1 CPA2P03965 1118 aaKnown RBP9.21□□□□□ -0.94
NME1NME1 MTH1P35198 433 aa9.21□□□□□ -0.94
NME1NME1 MAM1P40065 302 aa9.21□□□□□ -0.94
NME1NME1 COG1P53079 417 aa9.21□□□□□ -0.94
NME1NME1 CPR8P53728 308 aa9.21□□□□□ -0.94
NME1NME1 RNR3P21672 869 aaKnown RBP9.2□□□□□ -0.94
NME1NME1 MUP3P38734 546 aa9.2□□□□□ -0.94
NME1NME1 RIC1P40395 1056 aa9.2□□□□□ -0.94
NME1NME1 TMA108P40462 946 aa9.2□□□□□ -0.94
NME1NME1 IST3P40565 148 aaPredicted RBP9.2□□□□□ -0.94
NME1NME1 CBK1P53894 756 aa9.2□□□□□ -0.94
NME1NME1 RVB2Q12464 471 aaKnown RBP9.2□□□□□ -0.94
NME1NME1 YOL087CQ99247 1116 aa9.2□□□□□ -0.94
NME1NME1 URK1P27515 501 aa9.19□□□□□ -0.94
NME1NME1 MTG2P38860 518 aa9.19□□□□□ -0.94
NME1NME1 ERP2P39704 215 aa9.19□□□□□ -0.94
NME1NME1 LAS21P40367 830 aa9.19□□□□□ -0.94
NME1NME1 YIL161WP40449 235 aaKnown RBP9.19□□□□□ -0.94
NME1NME1 CSL4P53859 292 aaPredicted RBP9.19□□□□□ -0.94
NME1NME1 COG4Q06096 861 aa9.19□□□□□ -0.94
NME1NME1 YDR056CQ12025 205 aa9.19□□□□□ -0.94
NME1NME1 TY2A-LR1P0C2J4 438 aa9.18□□□□□ -0.94
NME1NME1 TY2A-FP0CX61 438 aa9.18□□□□□ -0.94
NME1NME1 TY2A-GR2P0CX62 438 aa9.18□□□□□ -0.94
NME1NME1 STE12P13574 688 aa9.18□□□□□ -0.94
NME1NME1 KGD2P19262 463 aaPredicted RBP9.18□□□□□ -0.94
NME1NME1 TY2A-CP25383 438 aa9.18□□□□□ -0.94
NME1NME1 ASN1P49089 572 aaKnown RBP9.18□□□□□ -0.94
NME1NME1 TY2A-DR2Q03483 438 aa9.18□□□□□ -0.94
NME1NME1 MRN1Q08925 612 aaKnown RBP RIP-Chip data9.18□□□□□ -0.94not detected
NME1NME1 TY2A-BQ12260 438 aa9.18□□□□□ -0.94
NME1NME1 TY2A-OR2Q12293 438 aa9.18□□□□□ -0.94
NME1NME1 TY2A-DR1Q12392 438 aa9.18□□□□□ -0.94
NME1NME1 TY2A-OR1Q12439 438 aa9.18□□□□□ -0.94
NME1NME1 TY2A-DR3Q99303 438 aa9.18□□□□□ -0.94
NME1NME1 YLR302CO13544 120 aa9.17□□□□□ -0.94
NME1NME1 SPO16P17122 198 aa9.17□□□□□ -0.94
NME1NME1 MRPL9P31334 269 aa9.17□□□□□ -0.94
NME1NME1 YGL117WP53133 265 aa9.17□□□□□ -0.94
NME1NME1 YNL092WP53934 400 aa9.17□□□□□ -0.94
NME1NME1 RPN12P32496 274 aa9.16□□□□□ -0.94
NME1NME1 SIP1P32578 815 aa9.16□□□□□ -0.94
NME1NME1 ASE1P50275 885 aa9.16□□□□□ -0.94
NME1NME1 VPS73P53142 486 aaKnown RBP9.16□□□□□ -0.94
NME1NME1 UBP16Q02863 499 aa9.16□□□□□ -0.94
NME1NME1 SNO4Q04902 237 aa9.16□□□□□ -0.94
NME1NME1 GTB1Q04924 702 aa9.16□□□□□ -0.94
NME1NME1 HSP33Q08914 237 aaKnown RBP9.16□□□□□ -0.94
NME1NME1 HSP32Q08992 237 aa9.16□□□□□ -0.94
NME1NME1 RRI2Q12348 645 aa9.16□□□□□ -0.94
NME1NME1 CHO2P05374 869 aaKnown RBP9.15□□□□□ -0.94
NME1NME1 AMD2P22580 549 aa9.15□□□□□ -0.94
NME1NME1 CBF2P32504 956 aa9.15□□□□□ -0.94
NME1NME1 COG2P53271 262 aa9.15□□□□□ -0.94
NME1NME1 STP3Q05937 343 aa9.15□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 108.4 ms