RNA–Protein interactions for RNA: ENST00000544752.6

GPHN-205, Transcript of gephyrin, humanhuman

TSL 2

Gene GPHN, Length 2,514 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-205ENST00000544752 PRDM10Q9NQV6 1147 aa6.91□□□□□ -1.3
GPHN-205ENST00000544752 POLIQ9UNA4 740 aa6.91□□□□□ -1.3
GPHN-205ENST00000544752 PCDHB11Q9Y5F2 797 aa6.91□□□□□ -1.3
GPHN-205ENST00000544752 CCDC88AQ3V6T2 1871 aa6.91□□□□□ -1.3
GPHN-205ENST00000544752 SCN4AP35499 1836 aa6.9□□□□□ -1.3
GPHN-205ENST00000544752 JUNDP17535 347 aa6.9□□□□□ -1.3
GPHN-205ENST00000544752 FSTL1Q12841 308 aa6.9□□□□□ -1.3
GPHN-205ENST00000544752 ARHGAP27Q6ZUM4 889 aa6.9□□□□□ -1.3
GPHN-205ENST00000544752 ZNF34Q8IZ26 560 aa6.9□□□□□ -1.3
GPHN-205ENST00000544752 IER2Q9BTL4 223 aa6.9□□□□□ -1.3
GPHN-205ENST00000544752 PRDM9Q9NQV7 894 aa6.9□□□□□ -1.3
GPHN-205ENST00000544752 EVA1BQ9NVM1 165 aa6.9□□□□□ -1.3
GPHN-205ENST00000544752 STIM2Q9P246 746 aa6.9□□□□□ -1.3
GPHN-205ENST00000544752 TSPYL4Q9UJ04 414 aa6.9□□□□□ -1.3
GPHN-205ENST00000544752 TTF2Q9UNY4 1162 aaKnown RBP6.9□□□□□ -1.3
GPHN-205ENST00000544752 CCNYL3P0C7X3 344 aa6.9□□□□□ -1.31
GPHN-205ENST00000544752 SRGNP10124 158 aa6.9□□□□□ -1.31
GPHN-205ENST00000544752 ETFBP38117 255 aa6.9□□□□□ -1.31
GPHN-205ENST00000544752 CRY2Q49AN0 593 aa6.9□□□□□ -1.31
GPHN-205ENST00000544752 ALG1LQ6GMV1 187 aa6.9□□□□□ -1.31
GPHN-205ENST00000544752 VPS37DQ86XT2 251 aa6.9□□□□□ -1.31
GPHN-205ENST00000544752 CKAP2LQ8IYA6 745 aa6.9□□□□□ -1.31
GPHN-205ENST00000544752 GPRASP2Q96D09 838 aa6.9□□□□□ -1.31
GPHN-205ENST00000544752 SNTG2Q9NY99 539 aa6.9□□□□□ -1.31
GPHN-205ENST00000544752 F6X3S4 739 aa6.89□□□□□ -1.31
GPHN-205ENST00000544752 PSEN2P49810 448 aa6.89□□□□□ -1.31
GPHN-205ENST00000544752 MCCD1P59942 119 aaPredicted RBP6.89□□□□□ -1.31
GPHN-205ENST00000544752 GNAI1P63096 354 aa6.89□□□□□ -1.31
GPHN-205ENST00000544752 PTPN12Q05209 780 aaKnown RBP6.89□□□□□ -1.31
GPHN-205ENST00000544752 TRIM28Q13263 835 aaKnown RBP6.89□□□□□ -1.31
GPHN-205ENST00000544752 LRP10Q7Z4F1 713 aa6.89□□□□□ -1.31
GPHN-205ENST00000544752 PPP1R42Q7Z4L9 355 aa6.89□□□□□ -1.31
GPHN-205ENST00000544752 NBPF5PQ86XG9 351 aaPredicted RBP6.89□□□□□ -1.31
GPHN-205ENST00000544752 RTKN2Q8IZC4 609 aa6.89□□□□□ -1.31
GPHN-205ENST00000544752 THAP11Q96EK4 314 aa6.89□□□□□ -1.31
GPHN-205ENST00000544752 CRAMP1Q96RY5 1269 aa6.89□□□□□ -1.31
GPHN-205ENST00000544752 DDX21Q9NR30 783 aaKnown RBP eCLIP6.89□□□□□ -1.31
GPHN-205ENST00000544752 FANCLQ9NW38 375 aa6.89□□□□□ -1.31
GPHN-205ENST00000544752 PDGFRBP09619 1106 aa6.89□□□□□ -1.31
GPHN-205ENST00000544752 USP4Q13107 963 aa6.89□□□□□ -1.31
GPHN-205ENST00000544752 C7orf43Q8WVR3 580 aa6.89□□□□□ -1.31
GPHN-205ENST00000544752 HYPKQ9NX55 129 aa6.89□□□□□ -1.31
GPHN-205ENST00000544752 SLX4Q8IY92 1834 aa6.89□□□□□ -1.31
GPHN-205ENST00000544752 M0R2N6 131 aa6.88□□□□□ -1.31
GPHN-205ENST00000544752 TOMM70O94826 608 aa6.88□□□□□ -1.31
GPHN-205ENST00000544752 DCTN1Q14203 1278 aa6.88□□□□□ -1.31
GPHN-205ENST00000544752 RASA3Q14644 834 aa6.88□□□□□ -1.31
GPHN-205ENST00000544752 PLEKHG4Q58EX7 1191 aa6.88□□□□□ -1.31
GPHN-205ENST00000544752 ODR4Q5SWX8 454 aa6.88□□□□□ -1.31
GPHN-205ENST00000544752 POTEHQ6S545 545 aa6.88□□□□□ -1.31
GPHN-205ENST00000544752 SMC5Q8IY18 1101 aa6.88□□□□□ -1.31
GPHN-205ENST00000544752 GJD3Q8N144 294 aa6.88□□□□□ -1.31
GPHN-205ENST00000544752 TSR2Q969E8 191 aaKnown RBP6.88□□□□□ -1.31
GPHN-205ENST00000544752 NUDT12Q9BQG2 462 aa6.88□□□□□ -1.31
GPHN-205ENST00000544752 OSBPL7Q9BZF2 842 aa6.88□□□□□ -1.31
GPHN-205ENST00000544752 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.88□□□□□ -1.31
GPHN-205ENST00000544752 ADAMTS8Q9UP79 889 aa6.88□□□□□ -1.31
GPHN-205ENST00000544752 A6NHS1 94 aa6.88□□□□□ -1.31
GPHN-205ENST00000544752 EPHA4P54764 986 aa6.88□□□□□ -1.31
GPHN-205ENST00000544752 RAB15P59190 212 aa6.88□□□□□ -1.31
GPHN-205ENST00000544752 SH3RF1Q7Z6J0 888 aa6.88□□□□□ -1.31
GPHN-205ENST00000544752 SCUBE3Q8IX30 993 aa6.88□□□□□ -1.31
GPHN-205ENST00000544752 SH3TC2Q8TF17 1288 aa6.88□□□□□ -1.31
GPHN-205ENST00000544752 SGSM3Q96HU1 749 aa6.88□□□□□ -1.31
GPHN-205ENST00000544752 MAGEC2Q9UBF1 373 aaPredicted RBP6.88□□□□□ -1.31
GPHN-205ENST00000544752 DBF4Q9UBU7 674 aaPredicted RBP6.88□□□□□ -1.31
GPHN-205ENST00000544752 NIP7Q9Y221 180 aaKnown RBP eCLIP6.88□□□□□ -1.31
GPHN-205ENST00000544752 CREB3O43889 395 aa6.87□□□□□ -1.31
GPHN-205ENST00000544752 CHRNA5P30532 468 aa6.87□□□□□ -1.31
GPHN-205ENST00000544752 DNM1Q05193 864 aaKnown RBP6.87□□□□□ -1.31
GPHN-205ENST00000544752 ERFEQ4G0M1 354 aa6.87□□□□□ -1.31
GPHN-205ENST00000544752 CCDC93Q567U6 631 aa6.87□□□□□ -1.31
GPHN-205ENST00000544752 C4orf48Q5BLP8 95 aa6.87□□□□□ -1.31
GPHN-205ENST00000544752 FAM126AQ9BYI3 521 aaPredicted RBP6.87□□□□□ -1.31
GPHN-205ENST00000544752 LRRC37AA6NMS7 1700 aa6.87□□□□□ -1.31
GPHN-205ENST00000544752 CACNA1SQ13698 1873 aa6.87□□□□□ -1.31
GPHN-205ENST00000544752 GLTPD2A6NH11 291 aa6.87□□□□□ -1.31
GPHN-205ENST00000544752 ACTN4O43707 911 aaKnown RBP6.87□□□□□ -1.31
GPHN-205ENST00000544752 PAX3P23760 479 aa6.87□□□□□ -1.31
GPHN-205ENST00000544752 IRS1P35568 1242 aa6.87□□□□□ -1.31
GPHN-205ENST00000544752 RGS3P49796 1198 aa6.87□□□□□ -1.31
GPHN-205ENST00000544752 SCNN1DP51172 638 aa6.87□□□□□ -1.31
GPHN-205ENST00000544752 RNF20Q5VTR2 975 aa6.87□□□□□ -1.31
GPHN-205ENST00000544752 PLBD2Q8NHP8 589 aa6.87□□□□□ -1.31
GPHN-205ENST00000544752 SNED1Q8TER0 1413 aa6.87□□□□□ -1.31
GPHN-205ENST00000544752 GPKOWQ92917 476 aaPredicted RBP eCLIP6.87□□□□□ -1.31
GPHN-205ENST00000544752 RBM17Q96I25 401 aaKnown RBP6.87□□□□□ -1.31
GPHN-205ENST00000544752 DDX60Q8IY21 1712 aaKnown RBP6.86□□□□□ -1.31
GPHN-205ENST00000544752 PPFIA4O75335 1185 aa6.86□□□□□ -1.31
GPHN-205ENST00000544752 APLP1P51693 650 aa6.86□□□□□ -1.31
GPHN-205ENST00000544752 FOXD4L6Q3SYB3 417 aaPredicted RBP6.86□□□□□ -1.31
GPHN-205ENST00000544752 PTCRAQ6ISU1 281 aaPredicted RBP6.86□□□□□ -1.31
GPHN-205ENST00000544752 FOXD4L3Q6VB84 417 aaPredicted RBP6.86□□□□□ -1.31
GPHN-205ENST00000544752 ANKS3Q6ZW76 656 aa6.86□□□□□ -1.31
GPHN-205ENST00000544752 WDR63Q8IWG1 891 aa6.86□□□□□ -1.31
GPHN-205ENST00000544752 HNRNPLLQ8WVV9 542 aaKnown RBP6.86□□□□□ -1.31
GPHN-205ENST00000544752 C12orf49Q9H741 205 aa6.86□□□□□ -1.31
GPHN-205ENST00000544752 RABGEF1Q9UJ41 708 aa6.86□□□□□ -1.31
GPHN-205ENST00000544752 EIF1AYO14602 144 aaKnown RBP6.86□□□□□ -1.31
GPHN-205ENST00000544752 BBOX1O75936 387 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms