RNA–Protein interactions for RNA: ENST00000544752.6

GPHN-205, Transcript of gephyrin, humanhuman

TSL 2

Gene GPHN, Length 2,514 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-205ENST00000544752 CHIC1Q5VXU3 224 aa14.68□□□□□ -0.06
GPHN-205ENST00000544752 AEBP2Q6ZN18 517 aaPredicted RBP14.29□□□□□ -0.12
GPHN-205ENST00000544752 PHF23Q9BUL5 403 aaPredicted RBP13.2□□□□□ -0.3
GPHN-205ENST00000544752 NISCHQ9Y2I1 1504 aa13.18□□□□□ -0.3
GPHN-205ENST00000544752 EHMT2Q96KQ7 1210 aa12.49□□□□□ -0.41
GPHN-205ENST00000544752 PLPPR3Q6T4P5 718 aa12.29□□□□□ -0.44
GPHN-205ENST00000544752 KCNA4P22459 653 aa12.04□□□□□ -0.48
GPHN-205ENST00000544752 CCDC180Q9P1Z9 1646 aa11.92□□□□□ -0.5
GPHN-205ENST00000544752 SLC24A1O60721 1099 aa11.91□□□□□ -0.5
GPHN-205ENST00000544752 CSRNP3Q8WYN3 585 aa11.83□□□□□ -0.52
GPHN-205ENST00000544752 ADRA2BP18089 450 aa11.79□□□□□ -0.52
GPHN-205ENST00000544752 SENP3Q9H4L4 574 aaPredicted RBP11.67□□□□□ -0.54
GPHN-205ENST00000544752 SLC4A1APQ9BWU0 796 aaKnown RBP11.49□□□□□ -0.57
GPHN-205ENST00000544752 RTN4Q9NQC3 1192 aaKnown RBP11.49□□□□□ -0.57
GPHN-205ENST00000544752 ABCC9O60706 1549 aa11.48□□□□□ -0.57
GPHN-205ENST00000544752 PPP6R1Q9UPN7 881 aa11.39□□□□□ -0.59
GPHN-205ENST00000544752 RB1CC1Q8TDY2 1594 aa11.2□□□□□ -0.62
GPHN-205ENST00000544752 NACADO15069 1562 aa11.2□□□□□ -0.62
GPHN-205ENST00000544752 AMER1Q5JTC6 1135 aaPredicted RBP11.2□□□□□ -0.62
GPHN-205ENST00000544752 MYO15BQ96JP2 1530 aa11.19□□□□□ -0.62
GPHN-205ENST00000544752 ZBTB22O15209 634 aa11.18□□□□□ -0.62
GPHN-205ENST00000544752 DCAF1Q9Y4B6 1507 aa11.06□□□□□ -0.64
GPHN-205ENST00000544752 PPP4R3CPQ6ZMV5 832 aa11.03□□□□□ -0.64
GPHN-205ENST00000544752 ZCCHC6Q5VYS8 1495 aaKnown RBP10.96□□□□□ -0.65
GPHN-205ENST00000544752 NPM3O75607 178 aaKnown RBP10.94□□□□□ -0.66
GPHN-205ENST00000544752 FOXD1Q16676 465 aa10.92□□□□□ -0.66
GPHN-205ENST00000544752 SHROOM4Q9ULL8 1493 aa10.91□□□□□ -0.66
GPHN-205ENST00000544752 UNC13AQ9UPW8 1703 aa10.9□□□□□ -0.66
GPHN-205ENST00000544752 NCBP3Q53F19 620 aaKnown RBP10.83□□□□□ -0.68
GPHN-205ENST00000544752 BICRAQ9NZM4 1560 aa10.8□□□□□ -0.68
GPHN-205ENST00000544752 DCAF8L2P0C7V8 631 aa10.76□□□□□ -0.69
GPHN-205ENST00000544752 PRKCSHP14314 528 aaPredicted RBP10.62□□□□□ -0.71
GPHN-205ENST00000544752 PABPN1Q86U42 306 aaKnown RBP eCLIP10.62□□□□□ -0.71
GPHN-205ENST00000544752 SCRIBQ14160 1630 aa10.62□□□□□ -0.71
GPHN-205ENST00000544752 FOXD4L1Q9NU39 408 aa10.61□□□□□ -0.71
GPHN-205ENST00000544752 DNAJC5BQ9UF47 199 aa10.59□□□□□ -0.71
GPHN-205ENST00000544752 FKBP8Q14318 412 aa10.59□□□□□ -0.71
GPHN-205ENST00000544752 EIF4G1Q04637 1599 aaKnown RBP10.52□□□□□ -0.73
GPHN-205ENST00000544752 PIAS4Q8N2W9 510 aaPredicted RBP10.49□□□□□ -0.73
GPHN-205ENST00000544752 CC2D2AQ9P2K1 1620 aa10.49□□□□□ -0.73
GPHN-205ENST00000544752 CECR2Q9BXF3 1484 aa10.41□□□□□ -0.74
GPHN-205ENST00000544752 CNKSR2Q8WXI2 1034 aa10.41□□□□□ -0.74
GPHN-205ENST00000544752 PLCB2Q00722 1185 aa10.39□□□□□ -0.75
GPHN-205ENST00000544752 DNAJC5Q9H3Z4 198 aa10.35□□□□□ -0.75
GPHN-205ENST00000544752 TAOK2Q9UL54 1235 aa10.34□□□□□ -0.75
GPHN-205ENST00000544752 NCAPD3P42695 1498 aa10.29□□□□□ -0.76
GPHN-205ENST00000544752 SMARCA2P51531 1590 aa10.27□□□□□ -0.76
GPHN-205ENST00000544752 HAP1P54257 671 aaPredicted RBP10.26□□□□□ -0.77
GPHN-205ENST00000544752 BCANQ96GW7 911 aa10.26□□□□□ -0.77
GPHN-205ENST00000544752 PEG3Q9GZU2 1588 aa10.26□□□□□ -0.77
GPHN-205ENST00000544752 HMGXB3Q12766 1538 aa10.26□□□□□ -0.77
GPHN-205ENST00000544752 SMARCA4P51532 1647 aa10.26□□□□□ -0.77
GPHN-205ENST00000544752 BAZ1AQ9NRL2 1556 aaPredicted RBP10.26□□□□□ -0.77
GPHN-205ENST00000544752 ATAD2BQ9ULI0 1458 aa10.21□□□□□ -0.78
GPHN-205ENST00000544752 TPRNQ4KMQ1 711 aa10.2□□□□□ -0.78
GPHN-205ENST00000544752 SLC4A2P04920 1241 aa10.14□□□□□ -0.79
GPHN-205ENST00000544752 TIMELESSQ9UNS1 1208 aa10.13□□□□□ -0.79
GPHN-205ENST00000544752 BAZ1BQ9UIG0 1483 aaKnown RBP10.1□□□□□ -0.79
GPHN-205ENST00000544752 MAPK8IP2Q13387 824 aaPredicted RBP10.09□□□□□ -0.79
GPHN-205ENST00000544752 DAXXQ9UER7 740 aaPredicted RBP10.08□□□□□ -0.8
GPHN-205ENST00000544752 MROH2BQ7Z745 1585 aa10.07□□□□□ -0.8
GPHN-205ENST00000544752 CUX2O14529 1486 aa10.07□□□□□ -0.8
GPHN-205ENST00000544752 LAMC3Q9Y6N6 1575 aa10.06□□□□□ -0.8
GPHN-205ENST00000544752 SCAF1Q9H7N4 1312 aaKnown RBP10.06□□□□□ -0.8
GPHN-205ENST00000544752 KDM2AQ9Y2K7 1162 aa10.02□□□□□ -0.81
GPHN-205ENST00000544752 TULP1O00294 542 aaPredicted RBP10.01□□□□□ -0.81
GPHN-205ENST00000544752 ATXN8OSP0DMR3 200 aa10.01□□□□□ -0.81
GPHN-205ENST00000544752 VSIG10Q8N0Z9 540 aa9.99□□□□□ -0.81
GPHN-205ENST00000544752 FBLN2P98095 1184 aa9.98□□□□□ -0.81
GPHN-205ENST00000544752 RNF216Q9NWF9 866 aaPredicted RBP9.97□□□□□ -0.81
GPHN-205ENST00000544752 ERCC6Q03468 1493 aa9.96□□□□□ -0.81
GPHN-205ENST00000544752 PDS5BQ9NTI5 1447 aa9.95□□□□□ -0.82
GPHN-205ENST00000544752 WIZO95785 1651 aa9.95□□□□□ -0.82
GPHN-205ENST00000544752 TOP2AP11388 1531 aaKnown RBP9.94□□□□□ -0.82
GPHN-205ENST00000544752 RSF1Q96T23 1441 aaPredicted RBP9.93□□□□□ -0.82
GPHN-205ENST00000544752 MYCNP04198 464 aaPredicted RBP9.93□□□□□ -0.82
GPHN-205ENST00000544752 CADPSQ9ULU8 1353 aa9.92□□□□□ -0.82
GPHN-205ENST00000544752 THOC2Q8NI27 1593 aaKnown RBP9.92□□□□□ -0.82
GPHN-205ENST00000544752 PRDM2Q13029 1718 aa9.89□□□□□ -0.83
GPHN-205ENST00000544752 NESP48681 1621 aa9.89□□□□□ -0.83
GPHN-205ENST00000544752 ATF5Q9Y2D1 282 aaPredicted RBP9.89□□□□□ -0.83
GPHN-205ENST00000544752 KIF21AQ7Z4S6 1674 aa9.88□□□□□ -0.83
GPHN-205ENST00000544752 CFTRP13569 1480 aa9.86□□□□□ -0.83
GPHN-205ENST00000544752 ARXQ96QS3 562 aa9.86□□□□□ -0.83
GPHN-205ENST00000544752 WDR62O43379 1518 aa9.85□□□□□ -0.83
GPHN-205ENST00000544752 MRC2Q9UBG0 1479 aa9.84□□□□□ -0.83
GPHN-205ENST00000544752 PKD2Q13563 968 aa9.81□□□□□ -0.84
GPHN-205ENST00000544752 CEP164Q9UPV0 1460 aa9.8□□□□□ -0.84
GPHN-205ENST00000544752 GTF3C3Q9Y5Q9 886 aa9.79□□□□□ -0.84
GPHN-205ENST00000544752 FANCD2Q9BXW9 1451 aa9.78□□□□□ -0.84
GPHN-205ENST00000544752 IFNLR1Q8IU57 520 aaPredicted RBP9.77□□□□□ -0.85
GPHN-205ENST00000544752 ABCC8Q09428 1581 aa9.76□□□□□ -0.85
GPHN-205ENST00000544752 CCDC88BA6NC98 1476 aa9.75□□□□□ -0.85
GPHN-205ENST00000544752 PAXIP1Q6ZW49 1069 aaPredicted RBP9.73□□□□□ -0.85
GPHN-205ENST00000544752 NPM1P06748 294 aaKnown RBP eCLIP9.73□□□□□ -0.85
GPHN-205ENST00000544752 VASPP50552 380 aaPredicted RBP9.72□□□□□ -0.85
GPHN-205ENST00000544752 CFAP44Q96MT7 982 aa9.72□□□□□ -0.85
GPHN-205ENST00000544752 HOXD11P31277 338 aaPredicted RBP9.7□□□□□ -0.86
GPHN-205ENST00000544752 FBXO3Q9UK99 471 aa9.7□□□□□ -0.86
GPHN-205ENST00000544752 URB2Q14146 1524 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms