RNA–Protein interactions for RNA: ENST00000544752.6

GPHN-205, Transcript of gephyrin, humanhuman

TSL 2

Gene GPHN, Length 2,514 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-205ENST00000544752 CHIC1Q5VXU3 224 aa14.68□□□□□ -0.06
GPHN-205ENST00000544752 AEBP2Q6ZN18 517 aaPredicted RBP14.29□□□□□ -0.12
GPHN-205ENST00000544752 PHF23Q9BUL5 403 aaPredicted RBP13.2□□□□□ -0.3
GPHN-205ENST00000544752 NISCHQ9Y2I1 1504 aa13.18□□□□□ -0.3
GPHN-205ENST00000544752 EHMT2Q96KQ7 1210 aa12.49□□□□□ -0.41
GPHN-205ENST00000544752 PLPPR3Q6T4P5 718 aa12.29□□□□□ -0.44
GPHN-205ENST00000544752 KCNA4P22459 653 aa12.04□□□□□ -0.48
GPHN-205ENST00000544752 CCDC180Q9P1Z9 1646 aa11.92□□□□□ -0.5
GPHN-205ENST00000544752 SLC24A1O60721 1099 aa11.91□□□□□ -0.5
GPHN-205ENST00000544752 CSRNP3Q8WYN3 585 aa11.83□□□□□ -0.52
GPHN-205ENST00000544752 ADRA2BP18089 450 aa11.79□□□□□ -0.52
GPHN-205ENST00000544752 SENP3Q9H4L4 574 aaPredicted RBP11.67□□□□□ -0.54
GPHN-205ENST00000544752 SLC4A1APQ9BWU0 796 aaKnown RBP11.49□□□□□ -0.57
GPHN-205ENST00000544752 RTN4Q9NQC3 1192 aaKnown RBP11.49□□□□□ -0.57
GPHN-205ENST00000544752 ABCC9O60706 1549 aa11.48□□□□□ -0.57
GPHN-205ENST00000544752 PPP6R1Q9UPN7 881 aa11.39□□□□□ -0.59
GPHN-205ENST00000544752 RB1CC1Q8TDY2 1594 aa11.2□□□□□ -0.62
GPHN-205ENST00000544752 NACADO15069 1562 aa11.2□□□□□ -0.62
GPHN-205ENST00000544752 AMER1Q5JTC6 1135 aaPredicted RBP11.2□□□□□ -0.62
GPHN-205ENST00000544752 MYO15BQ96JP2 1530 aa11.19□□□□□ -0.62
GPHN-205ENST00000544752 ZBTB22O15209 634 aa11.18□□□□□ -0.62
GPHN-205ENST00000544752 DCAF1Q9Y4B6 1507 aa11.06□□□□□ -0.64
GPHN-205ENST00000544752 PPP4R3CPQ6ZMV5 832 aa11.03□□□□□ -0.64
GPHN-205ENST00000544752 ZCCHC6Q5VYS8 1495 aaKnown RBP10.96□□□□□ -0.65
GPHN-205ENST00000544752 NPM3O75607 178 aaKnown RBP10.94□□□□□ -0.66
GPHN-205ENST00000544752 FOXD1Q16676 465 aa10.92□□□□□ -0.66
GPHN-205ENST00000544752 SHROOM4Q9ULL8 1493 aa10.91□□□□□ -0.66
GPHN-205ENST00000544752 UNC13AQ9UPW8 1703 aa10.9□□□□□ -0.66
GPHN-205ENST00000544752 NCBP3Q53F19 620 aaKnown RBP10.83□□□□□ -0.68
GPHN-205ENST00000544752 BICRAQ9NZM4 1560 aa10.8□□□□□ -0.68
GPHN-205ENST00000544752 DCAF8L2P0C7V8 631 aa10.76□□□□□ -0.69
GPHN-205ENST00000544752 PRKCSHP14314 528 aaPredicted RBP10.62□□□□□ -0.71
GPHN-205ENST00000544752 PABPN1Q86U42 306 aaKnown RBP eCLIP10.62□□□□□ -0.71
GPHN-205ENST00000544752 SCRIBQ14160 1630 aa10.62□□□□□ -0.71
GPHN-205ENST00000544752 FOXD4L1Q9NU39 408 aa10.61□□□□□ -0.71
GPHN-205ENST00000544752 DNAJC5BQ9UF47 199 aa10.59□□□□□ -0.71
GPHN-205ENST00000544752 FKBP8Q14318 412 aa10.59□□□□□ -0.71
GPHN-205ENST00000544752 EIF4G1Q04637 1599 aaKnown RBP10.52□□□□□ -0.73
GPHN-205ENST00000544752 PIAS4Q8N2W9 510 aaPredicted RBP10.49□□□□□ -0.73
GPHN-205ENST00000544752 CC2D2AQ9P2K1 1620 aa10.49□□□□□ -0.73
GPHN-205ENST00000544752 CECR2Q9BXF3 1484 aa10.41□□□□□ -0.74
GPHN-205ENST00000544752 CNKSR2Q8WXI2 1034 aa10.41□□□□□ -0.74
GPHN-205ENST00000544752 PLCB2Q00722 1185 aa10.39□□□□□ -0.75
GPHN-205ENST00000544752 DNAJC5Q9H3Z4 198 aa10.35□□□□□ -0.75
GPHN-205ENST00000544752 TAOK2Q9UL54 1235 aa10.34□□□□□ -0.75
GPHN-205ENST00000544752 NCAPD3P42695 1498 aa10.29□□□□□ -0.76
GPHN-205ENST00000544752 SMARCA2P51531 1590 aa10.27□□□□□ -0.76
GPHN-205ENST00000544752 HAP1P54257 671 aaPredicted RBP10.26□□□□□ -0.77
GPHN-205ENST00000544752 BCANQ96GW7 911 aa10.26□□□□□ -0.77
GPHN-205ENST00000544752 PEG3Q9GZU2 1588 aa10.26□□□□□ -0.77
GPHN-205ENST00000544752 HMGXB3Q12766 1538 aa10.26□□□□□ -0.77
GPHN-205ENST00000544752 SMARCA4P51532 1647 aa10.26□□□□□ -0.77
GPHN-205ENST00000544752 BAZ1AQ9NRL2 1556 aaPredicted RBP10.26□□□□□ -0.77
GPHN-205ENST00000544752 ATAD2BQ9ULI0 1458 aa10.21□□□□□ -0.78
GPHN-205ENST00000544752 TPRNQ4KMQ1 711 aa10.2□□□□□ -0.78
GPHN-205ENST00000544752 SLC4A2P04920 1241 aa10.14□□□□□ -0.79
GPHN-205ENST00000544752 TIMELESSQ9UNS1 1208 aa10.13□□□□□ -0.79
GPHN-205ENST00000544752 BAZ1BQ9UIG0 1483 aaKnown RBP10.1□□□□□ -0.79
GPHN-205ENST00000544752 MAPK8IP2Q13387 824 aaPredicted RBP10.09□□□□□ -0.79
GPHN-205ENST00000544752 DAXXQ9UER7 740 aaPredicted RBP10.08□□□□□ -0.8
GPHN-205ENST00000544752 MROH2BQ7Z745 1585 aa10.07□□□□□ -0.8
GPHN-205ENST00000544752 CUX2O14529 1486 aa10.07□□□□□ -0.8
GPHN-205ENST00000544752 LAMC3Q9Y6N6 1575 aa10.06□□□□□ -0.8
GPHN-205ENST00000544752 SCAF1Q9H7N4 1312 aaKnown RBP10.06□□□□□ -0.8
GPHN-205ENST00000544752 KDM2AQ9Y2K7 1162 aa10.02□□□□□ -0.81
GPHN-205ENST00000544752 TULP1O00294 542 aaPredicted RBP10.01□□□□□ -0.81
GPHN-205ENST00000544752 ATXN8OSP0DMR3 200 aa10.01□□□□□ -0.81
GPHN-205ENST00000544752 VSIG10Q8N0Z9 540 aa9.99□□□□□ -0.81
GPHN-205ENST00000544752 FBLN2P98095 1184 aa9.98□□□□□ -0.81
GPHN-205ENST00000544752 RNF216Q9NWF9 866 aaPredicted RBP9.97□□□□□ -0.81
GPHN-205ENST00000544752 ERCC6Q03468 1493 aa9.96□□□□□ -0.81
GPHN-205ENST00000544752 PDS5BQ9NTI5 1447 aa9.95□□□□□ -0.82
GPHN-205ENST00000544752 WIZO95785 1651 aa9.95□□□□□ -0.82
GPHN-205ENST00000544752 TOP2AP11388 1531 aaKnown RBP9.94□□□□□ -0.82
GPHN-205ENST00000544752 RSF1Q96T23 1441 aaPredicted RBP9.93□□□□□ -0.82
GPHN-205ENST00000544752 MYCNP04198 464 aaPredicted RBP9.93□□□□□ -0.82
GPHN-205ENST00000544752 CADPSQ9ULU8 1353 aa9.92□□□□□ -0.82
GPHN-205ENST00000544752 THOC2Q8NI27 1593 aaKnown RBP9.92□□□□□ -0.82
GPHN-205ENST00000544752 PRDM2Q13029 1718 aa9.89□□□□□ -0.83
GPHN-205ENST00000544752 NESP48681 1621 aa9.89□□□□□ -0.83
GPHN-205ENST00000544752 ATF5Q9Y2D1 282 aaPredicted RBP9.89□□□□□ -0.83
GPHN-205ENST00000544752 KIF21AQ7Z4S6 1674 aa9.88□□□□□ -0.83
GPHN-205ENST00000544752 CFTRP13569 1480 aa9.86□□□□□ -0.83
GPHN-205ENST00000544752 ARXQ96QS3 562 aa9.86□□□□□ -0.83
GPHN-205ENST00000544752 WDR62O43379 1518 aa9.85□□□□□ -0.83
GPHN-205ENST00000544752 MRC2Q9UBG0 1479 aa9.84□□□□□ -0.83
GPHN-205ENST00000544752 PKD2Q13563 968 aa9.81□□□□□ -0.84
GPHN-205ENST00000544752 CEP164Q9UPV0 1460 aa9.8□□□□□ -0.84
GPHN-205ENST00000544752 GTF3C3Q9Y5Q9 886 aa9.79□□□□□ -0.84
GPHN-205ENST00000544752 FANCD2Q9BXW9 1451 aa9.78□□□□□ -0.84
GPHN-205ENST00000544752 IFNLR1Q8IU57 520 aaPredicted RBP9.77□□□□□ -0.85
GPHN-205ENST00000544752 ABCC8Q09428 1581 aa9.76□□□□□ -0.85
GPHN-205ENST00000544752 CCDC88BA6NC98 1476 aa9.75□□□□□ -0.85
GPHN-205ENST00000544752 PAXIP1Q6ZW49 1069 aaPredicted RBP9.73□□□□□ -0.85
GPHN-205ENST00000544752 NPM1P06748 294 aaKnown RBP eCLIP9.73□□□□□ -0.85
GPHN-205ENST00000544752 VASPP50552 380 aaPredicted RBP9.72□□□□□ -0.85
GPHN-205ENST00000544752 CFAP44Q96MT7 982 aa9.72□□□□□ -0.85
GPHN-205ENST00000544752 HOXD11P31277 338 aaPredicted RBP9.7□□□□□ -0.86
GPHN-205ENST00000544752 FBXO3Q9UK99 471 aa9.7□□□□□ -0.86
GPHN-205ENST00000544752 URB2Q14146 1524 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms