RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 COL1A1P02452 1464 aaPredicted RBP18.7■□□□□ 0.58
SNX6-202ENST00000396526 TXNRD1Q16881 649 aa18.69■□□□□ 0.58
SNX6-202ENST00000396526 DCP1AQ9NPI6 582 aaPredicted RBP18.69■□□□□ 0.58
SNX6-202ENST00000396526 RRAGDQ9NQL2 400 aaPredicted RBP18.69■□□□□ 0.58
SNX6-202ENST00000396526 USP25Q9UHP3 1055 aa18.69■□□□□ 0.58
SNX6-202ENST00000396526 SBK1Q52WX2 424 aa18.69■□□□□ 0.58
SNX6-202ENST00000396526 FTOQ9C0B1 505 aaKnown RBP eCLIP18.69■□□□□ 0.58
SNX6-202ENST00000396526 PCDHA7Q9UN72 937 aa18.69■□□□□ 0.58
SNX6-202ENST00000396526 CRY2Q49AN0 593 aa18.68■□□□□ 0.58
SNX6-202ENST00000396526 TXNRD3Q86VQ6 643 aa18.68■□□□□ 0.58
SNX6-202ENST00000396526 ORC4O43929 436 aa18.68■□□□□ 0.58
SNX6-202ENST00000396526 RBM43Q6ZSC3 357 aaKnown RBP18.68■□□□□ 0.58
SNX6-202ENST00000396526 NLGN1Q8N2Q7 840 aa18.68■□□□□ 0.58
SNX6-202ENST00000396526 CRAMP1Q96RY5 1269 aa18.68■□□□□ 0.58
SNX6-202ENST00000396526 MCM9Q9NXL9 1143 aa18.68■□□□□ 0.58
SNX6-202ENST00000396526 CCDC178Q5BJE1 867 aa18.68■□□□□ 0.58
SNX6-202ENST00000396526 ILDR1Q86SU0 546 aaPredicted RBP18.68■□□□□ 0.58
SNX6-202ENST00000396526 ZNF287Q9HBT7 754 aa18.68■□□□□ 0.58
SNX6-202ENST00000396526 FAM217BQ9NTX9 383 aaPredicted RBP18.68■□□□□ 0.58
SNX6-202ENST00000396526 NID2Q14112 1375 aa18.67■□□□□ 0.58
SNX6-202ENST00000396526 CRACR2BQ8N4Y2 399 aaPredicted RBP18.67■□□□□ 0.58
SNX6-202ENST00000396526 FLAD1Q8NFF5 587 aa18.67■□□□□ 0.58
SNX6-202ENST00000396526 CTCFLQ8NI51 663 aaPredicted RBP18.67■□□□□ 0.58
SNX6-202ENST00000396526 JAG2Q9Y219 1238 aa18.67■□□□□ 0.58
SNX6-202ENST00000396526 TAF1P21675 1872 aa18.67■□□□□ 0.58
SNX6-202ENST00000396526 TAF1LQ8IZX4 1826 aa18.67■□□□□ 0.58
SNX6-202ENST00000396526 ZNF772Q68DY9 489 aaPredicted RBP18.67■□□□□ 0.58
SNX6-202ENST00000396526 CLIC4Q9Y696 253 aa18.67■□□□□ 0.58
SNX6-202ENST00000396526 TSPY2A6NKD2 308 aa18.67■□□□□ 0.58
SNX6-202ENST00000396526 GOLGA6L6A8MZA4 724 aa18.67■□□□□ 0.58
SNX6-202ENST00000396526 ADCY5O95622 1261 aa18.67■□□□□ 0.58
SNX6-202ENST00000396526 FGRP09769 529 aa18.67■□□□□ 0.58
SNX6-202ENST00000396526 PLCG2P16885 1265 aa18.67■□□□□ 0.58
SNX6-202ENST00000396526 CCDC82Q8N4S0 544 aa18.67■□□□□ 0.58
SNX6-202ENST00000396526 TBC1D22AQ8WUA7 517 aa18.67■□□□□ 0.58
SNX6-202ENST00000396526 AIFM3Q96NN9 605 aa18.67■□□□□ 0.58
SNX6-202ENST00000396526 RNF26Q9BY78 433 aaPredicted RBP18.67■□□□□ 0.58
SNX6-202ENST00000396526 C6orf229H3BNL8 230 aa18.66■□□□□ 0.58
SNX6-202ENST00000396526 HOXA10P31260 410 aaPredicted RBP18.66■□□□□ 0.58
SNX6-202ENST00000396526 RBM6P78332 1123 aaKnown RBP18.66■□□□□ 0.58
SNX6-202ENST00000396526 SLC39A14Q15043 492 aa18.66■□□□□ 0.58
SNX6-202ENST00000396526 NKX2-3Q8TAU0 364 aa18.66■□□□□ 0.58
SNX6-202ENST00000396526 GJB4Q9NTQ9 266 aa18.66■□□□□ 0.58
SNX6-202ENST00000396526 GOLGA6L19H0YKK7 550 aa18.66■□□□□ 0.58
SNX6-202ENST00000396526 PRDM1O75626 825 aa18.66■□□□□ 0.58
SNX6-202ENST00000396526 SEC23AQ15436 765 aa18.66■□□□□ 0.58
SNX6-202ENST00000396526 ANO6Q4KMQ2 910 aa18.66■□□□□ 0.58
SNX6-202ENST00000396526 BRMS1Q9HCU9 246 aa18.66■□□□□ 0.58
SNX6-202ENST00000396526 TACC3Q9Y6A5 838 aa18.66■□□□□ 0.58
SNX6-202ENST00000396526 TIAM2Q8IVF5 1701 aa18.66■□□□□ 0.58
SNX6-202ENST00000396526 DDAH1O94760 285 aa18.65■□□□□ 0.58
SNX6-202ENST00000396526 GPSM2P81274 684 aa18.65■□□□□ 0.58
SNX6-202ENST00000396526 ENAHQ8N8S7 591 aaPredicted RBP18.65■□□□□ 0.58
SNX6-202ENST00000396526 ZNF384Q8TF68 577 aa18.65■□□□□ 0.58
SNX6-202ENST00000396526 NAT10Q9H0A0 1025 aaKnown RBP18.65■□□□□ 0.58
SNX6-202ENST00000396526 CD209Q9NNX6 404 aa18.65■□□□□ 0.58
SNX6-202ENST00000396526 ANO10Q9NW15 660 aa18.65■□□□□ 0.58
SNX6-202ENST00000396526 SBF2Q86WG5 1849 aa18.65■□□□□ 0.58
SNX6-202ENST00000396526 COL4A1P02462 1669 aa18.65■□□□□ 0.58
SNX6-202ENST00000396526 CYP2D7A0A087X1C5 515 aa18.65■□□□□ 0.58
SNX6-202ENST00000396526 U2AF2P26368 475 aaKnown RBP eCLIP18.65■□□□□ 0.581e-8■■□□□ 13.1
SNX6-202ENST00000396526 ZNF165P49910 485 aa18.65■□□□□ 0.58
SNX6-202ENST00000396526 NOL7Q9UMY1 257 aaKnown RBP18.65■□□□□ 0.58
SNX6-202ENST00000396526 MRVI1Q9Y6F6 885 aa18.65■□□□□ 0.58
SNX6-202ENST00000396526 STX1AQ16623 288 aa18.65■□□□□ 0.58
SNX6-202ENST00000396526 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.65■□□□□ 0.58
SNX6-202ENST00000396526 MKNK2Q9HBH9 465 aa18.65■□□□□ 0.58
SNX6-202ENST00000396526 PPP6R2O75170 966 aa18.64■□□□□ 0.58
SNX6-202ENST00000396526 TPM3P06753 285 aa18.64■□□□□ 0.58
SNX6-202ENST00000396526 FOXP1Q9H334 677 aaPredicted RBP18.64■□□□□ 0.58
SNX6-202ENST00000396526 KIF28PB7ZC32 967 aa18.64■□□□□ 0.57
SNX6-202ENST00000396526 CMA1P23946 247 aa18.64■□□□□ 0.57
SNX6-202ENST00000396526 KIF5BP33176 963 aa18.64■□□□□ 0.57
SNX6-202ENST00000396526 PPP4CP60510 307 aa18.64■□□□□ 0.57
SNX6-202ENST00000396526 RILPL1Q5EBL4 403 aa18.64■□□□□ 0.57
SNX6-202ENST00000396526 NOSTRINQ8IVI9 506 aa18.64■□□□□ 0.57
SNX6-202ENST00000396526 CEP131Q9UPN4 1083 aa18.64■□□□□ 0.57
SNX6-202ENST00000396526 MMP1P03956 469 aa18.64■□□□□ 0.57
SNX6-202ENST00000396526 KIAA2012Q0VF49 1180 aa18.64■□□□□ 0.57
SNX6-202ENST00000396526 DIS3L2Q8IYB7 885 aaKnown RBP18.64■□□□□ 0.57
SNX6-202ENST00000396526 BECN2A8MW95 431 aa18.63■□□□□ 0.57
SNX6-202ENST00000396526 ZNF444Q8N0Y2 327 aaPredicted RBP18.63■□□□□ 0.57
SNX6-202ENST00000396526 PODXL2Q9NZ53 605 aa18.63■□□□□ 0.57
SNX6-202ENST00000396526 A0A1B0GVL5 298 aa18.62■□□□□ 0.57
SNX6-202ENST00000396526 POLRMTO00411 1230 aaKnown RBP18.62■□□□□ 0.57
SNX6-202ENST00000396526 ENGASEQ8NFI3 743 aa18.62■□□□□ 0.57
SNX6-202ENST00000396526 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.62■□□□□ 0.57
SNX6-202ENST00000396526 ZKSCAN5Q9Y2L8 839 aa18.62■□□□□ 0.57
SNX6-202ENST00000396526 IRS2Q9Y4H2 1338 aa18.62■□□□□ 0.57
SNX6-202ENST00000396526 CACNA1SQ13698 1873 aa18.62■□□□□ 0.57
SNX6-202ENST00000396526 G3V3G9 751 aa18.62■□□□□ 0.57
SNX6-202ENST00000396526 PLSCR1O15162 318 aa18.62■□□□□ 0.57
SNX6-202ENST00000396526 APBA3O96018 575 aa18.62■□□□□ 0.57
SNX6-202ENST00000396526 DCAF8Q5TAQ9 597 aa18.62■□□□□ 0.57
SNX6-202ENST00000396526 SP8Q8IXZ3 490 aa18.62■□□□□ 0.57
SNX6-202ENST00000396526 CHD4Q14839 1912 aa18.61■□□□□ 0.57
SNX6-202ENST00000396526 ALDH1B1P30837 517 aa18.61■□□□□ 0.57
SNX6-202ENST00000396526 SNW1Q13573 536 aaKnown RBP18.61■□□□□ 0.57
SNX6-202ENST00000396526 CEP57L1Q8IYX8 460 aa18.61■□□□□ 0.57
SNX6-202ENST00000396526 FMR1NBQ8N0W7 255 aaPredicted RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms