RNA–Protein interactions for RNA: ENSMUST00000136980.7

Prpf40b-208, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40b, Length 3,047 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-208ENSMUST00000136980 Ncoa4Q5U4H9 625 aa13.01□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Cfap100Q80VN0 613 aa13.01□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Wdr60Q8C761 999 aa13.01□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Bola3Q8CEI1 110 aa13.01□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Sox30Q8CGW4 782 aa13.01□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Stard3nlQ9DCI3 235 aa13.01□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Zc3h4Q6ZPZ3 1304 aaKnown RBP13.01□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Scn4aQ9ER60 1841 aa13□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Ddx60E9PZQ1 1711 aa13□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Ccdc191J3QQ27 883 aa13□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Nek1P51954 1203 aa13□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Vsnl1P62761 191 aa13□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Jakmip3Q5DTN8 844 aa13□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Uap1Q91YN5 522 aa13□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Smc1bQ920F6 1248 aa13□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Ehd4Q9EQP2 541 aa13□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Klhl33G3UW92 533 aa13□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Scp2P32020 547 aaKnown RBP13□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Myo1bP46735 1107 aa13□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Ankle2Q6P1H6 964 aa13□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Fam102bQ8BQS4 339 aa13□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 9230110C19RikQ8CC70 267 aa13□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Ccdc83Q9D4V3 305 aa13□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Sik3Q6P4S6 1311 aa12.99□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Nap1l2P51860 460 aa12.99□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Lrrc1Q80VQ1 524 aa12.99□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Zbtb43Q9DAI4 467 aa12.99□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Cwc25Q9DBF7 416 aa12.99□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Nid2O88322 1403 aa12.99□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Npc1l1Q6T3U4 1333 aa12.99□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Mcm5P49718 733 aa12.99□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Cfap69Q8BH53 942 aa12.99□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Tcp11l1Q8BTG3 509 aa12.99□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Tubb4aQ9D6F9 444 aa12.99□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Suclg2Q9Z2I8 433 aa12.99□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Thsd7aQ69ZU6 1645 aa12.99□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Gm21663A0A0G2JE01 267 aa12.99□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Cyp3a57D3YYZ0 503 aa12.99□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Gm7361D3Z6R1 267 aa12.99□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Rsph10bE9PYQ0 876 aa12.99□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 5031410I06RikE9Q4E0 267 aa12.99□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Gm1979E9QAN3 267 aa12.99□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Gm42641I6L9G2 585 aa12.99□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Gm5862K7N5V5 267 aa12.99□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Gm10220K7N660 267 aa12.99□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Pde6aP27664 859 aa12.99□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Klra3Q64329 266 aa12.99□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Fhod1Q6P9Q4 1197 aa12.99□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 AtripQ8BMG1 785 aa12.99□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Ttc12Q8BW49 704 aa12.99□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Usp27Q8CEG8 438 aa12.99□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Nat10Q8K224 1024 aaKnown RBP12.99□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Sugt1Q9CX34 336 aa12.99□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Pik3ap1Q9EQ32 811 aa12.99□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Tfcp2Q9ERA0 502 aa12.99□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 D430041D05RikF6ZGR6 1678 aa12.98□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Rad23aP54726 363 aa12.98□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Lig3P97386 1015 aa12.98□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Tmem266Q8BZB3 538 aa12.98□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 ImmtQ8CAQ8 757 aaKnown RBP12.98□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 NenfQ9CQ45 171 aa12.98□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Mageb16Q9CWV4 363 aa12.98□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Mon2Q80TL7 1715 aa12.98□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Gm21698A0A087WQP8 267 aa12.98□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Gm21671G3UY31 267 aa12.98□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Pth1rP41593 591 aa12.98□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Krt86P97861 486 aa12.98□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Exoc8Q6PGF7 716 aa12.98□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Ccdc150Q8CDI7 1110 aa12.98□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 GptQ8QZR5 496 aa12.98□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Ipo7Q9EPL8 1038 aaKnown RBP12.98□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Col4a1P02463 1669 aa12.97□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 GclcP97494 637 aa12.97□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Nab2Q61127 525 aa12.97□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Nek5Q7TSC3 627 aa12.97□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Def6Q8C2K1 630 aa12.97□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Ppfibp1Q8C8U0 969 aaKnown RBP12.97□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 TkfcQ8VC30 578 aa12.97□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Eaf2Q91ZD6 262 aa12.97□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Mis18aQ9CZJ6 204 aa12.97□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Thap2Q9D305 217 aa12.97□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Appbp2Q9DAX9 585 aa12.97□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Hip1rQ9JKY5 1068 aa12.97□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Dpf1Q9QX66 387 aa12.97□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 CpdO89001 1377 aa12.97□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Sox5P35710 763 aa12.97□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 LtbrP50284 415 aa12.97□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Klra9Q2TJJ8 266 aa12.97□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Csrnp2Q8BGQ2 534 aa12.97□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Zkscan8Q8BSL0 588 aa12.97□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Hic2Q9JLZ6 619 aaKnown RBP12.97□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Klra10Q9R1G6 266 aa12.97□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Als2Q920R0 1651 aa12.97□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Nfat5Q9WV30 1534 aa12.97□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Myo3bQ1EG27 1305 aa12.97□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Ces1hD3Z298 562 aa12.97□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Ugt1a8D3Z748 530 aa12.97□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Ugt1a10E9PXN7 530 aa12.97□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 Adssl1P28650 457 aa12.97□□□□□ -0.33
Prpf40b-208ENSMUST00000136980 CrklP47941 303 aa12.97□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 14 ms