RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Zfp213E9QAW0 468 aa11.55□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 PpardP35396 440 aa11.55□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Gimap7Q8R379 293 aa11.55□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Tulp1Q9Z273 543 aa11.55□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Als2cr12Q8BVM7 383 aa11.54□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Kiaa1024Q8K3V7 917 aa11.54□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 NapaQ9DB05 295 aa11.54□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Prex1Q69ZK0 1650 aa11.54□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Ano9P86044 747 aa11.54□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Ripor2Q80U16 1078 aa11.54□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Sdad1Q80UZ2 687 aaKnown RBP11.54□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Tfcp2Q9ERA0 502 aa11.54□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Plekhg2Q6KAU7 1340 aa11.54□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Ifit1Q64282 463 aa11.54□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 NelfbQ8C4Y3 580 aa11.54□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Bst2Q8R2Q8 172 aa11.54□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Dph6Q9CQ28 267 aa11.54□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Hsf2bpQ9D4G2 338 aa11.54□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Cdc42bpbQ7TT50 1713 aa11.54□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Pcdhb9E9Q5G2 828 aa11.54□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Eef2kO08796 724 aa11.54□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 DesP31001 469 aaKnown RBP11.54□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Adam1aQ60813 791 aa11.54□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Ctnna2Q61301 953 aa11.54□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Haus6Q6NV99 933 aaKnown RBP11.54□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Snd1Q78PY7 910 aaKnown RBP11.54□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Olfr118Q7TRJ6 321 aa11.54□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Eid1Q9DCR4 169 aa11.54□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Elf2Q9JHC9 593 aa11.54□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Iqsec2Q5DU25 1478 aa11.54□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Rreb1Q3UH06 1700 aaKnown RBP11.53□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Gpr182P43142 395 aa11.53□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Rexo1Q7TT28 1213 aa11.53□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Arfgap2Q99K28 520 aa11.53□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Pdcd6ipQ9WU78 869 aaKnown RBP11.53□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Dip2aQ8BWT5 1523 aa11.53□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Gm43638A0A0J9YU36 694 aa11.53□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Trappc10Q3TLI0 1259 aa11.53□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Sdccag8Q80UF4 717 aa11.53□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 GlmnQ8BZM1 596 aa11.53□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Cabp7Q91ZM8 215 aa11.53□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Dmrtc1Q9D9R7 182 aa11.53□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Zkscan5Q9Z1D8 819 aa11.53□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Elmsan1E9Q2I4 1089 aaKnown RBP11.53□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Cetn3O35648 167 aa11.53□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Gjc1P28229 396 aa11.53□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Fermt1P59113 677 aa11.53□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Ccdc114Q3UX62 658 aa11.53□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Fam228bQ497Q6 232 aa11.53□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Ankrd23Q812A3 306 aa11.53□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Riox2Q8CD15 465 aa11.53□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Cxcl11Q9JHH5 100 aa11.53□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Znf394Q9Z1D9 521 aa11.53□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 AglF8VPN4 1532 aa11.53□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 EmbP21995 330 aa11.53□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Lrrc8aQ80WG5 810 aa11.53□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Ppp1r37Q8BKR5 712 aa11.53□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 EngaseQ8BX80 734 aa11.53□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Naa30Q8CES0 364 aa11.53□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Ccdc170D3YXL0 722 aa11.52□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Zscan18E9PUD6 809 aa11.52□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Cd3dP04235 173 aa11.52□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Stxbp3Q60770 592 aa11.52□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Tas2r124Q7M718 309 aa11.52□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Depdc1bQ8BH88 529 aa11.52□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Rassf2Q8BMS9 326 aa11.52□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Klhl20Q8VCK5 604 aa11.52□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Cep19Q9CQA8 163 aa11.52□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Six6os1Q9CTN5 574 aa11.52□□□□□ -0.56
Ccdc40-201ENSMUST00000035935 Arhgef28P97433 1693 aa11.52□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Adcy9P51830 1353 aa11.52□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Atp2b1G5E829 1220 aa11.52□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Ctnna3Q65CL1 895 aa11.52□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Slc17a8Q8BFU8 601 aa11.52□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Pnpla2Q8BJ56 486 aa11.52□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Shtn1Q8K2Q9 631 aa11.52□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Nod2Q8K3Z0 1020 aa11.52□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Kcnk13Q8R1P5 405 aa11.52□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Klhl40Q9D783 621 aa11.52□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Azi2Q9QYP6 405 aa11.52□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Cdhr2E9Q7P9 1308 aa11.52□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Klhl34A2AI76 644 aa11.52□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Stat5bP42232 786 aa11.52□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Slc27a1Q60714 646 aa11.52□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Exoc3Q6KAR6 755 aa11.52□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Lin9Q8C735 542 aa11.52□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Pold4Q9CWP8 107 aa11.52□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Fndc1E9Q043 1732 aa11.52□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 PtprmP28828 1452 aa11.52□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Mcm5P49718 733 aa11.51□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Mdh1bQ5F204 500 aa11.51□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Tbc1d31Q6NXY1 996 aa11.51□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Stoml1Q8CI66 399 aa11.51□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Gtpbp4Q99ME9 634 aaKnown RBP11.51□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 2310002L09RikQ9D7L5 217 aa11.51□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Aox2Q5SGK3 1345 aa11.51□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Ankrd35E9Q9D8 996 aa11.51□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Vmn2r68L7N2B3 851 aa11.51□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Ms4a2P20490 235 aa11.51□□□□□ -0.57
Ccdc40-201ENSMUST00000035935 Mtss1lQ6P9S0 715 aa11.51□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 73.7 ms