RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Nfe2l3Q9WTM4 660 aa9.64□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Gja10Q9WUS4 505 aa9.64□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Ddx60E9PZQ1 1711 aa9.64□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Ccng2O08918 344 aa9.64□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Npy5rO70342 466 aa9.64□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Ift74Q8BKE9 600 aa9.64□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Larp6Q8BN59 492 aa9.64□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Prpf3Q922U1 683 aaKnown RBP9.64□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Syce1Q9D495 329 aa9.64□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Xpo4Q9ESJ0 1151 aa9.64□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Aox4Q3TYQ9 1336 aa9.64□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Gm5592Q3V0A6 857 aa9.63□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Pex1Q5BL07 1284 aa9.63□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Kiaa0319lQ8K135 1048 aa9.63□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Krt79Q8VED5 531 aa9.63□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Stk39Q9Z1W9 556 aa9.63□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Frmd7A2AD83 703 aa9.63□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Cyp2d10P24456 504 aa9.63□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Sun3Q5SS91 320 aa9.63□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Fbxo2Q80UW2 297 aa9.63□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Sugp2Q8CH09 1067 aa9.63□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 DpydQ8CHR6 1025 aa9.63□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Wnk3Q80XP9 1757 aa9.63□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Gm5624F6ZZG8 207 aa9.63□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Zbtb7aO88939 569 aaKnown RBP9.63□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Myl3P09542 204 aa9.63□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Rtkn2Q14B46 604 aa9.63□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 ZyxQ62523 564 aa9.63□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Terb1Q8C0V1 768 aa9.63□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Kcnn1Q9EQR3 537 aa9.63□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Cnpy2Q9QXT0 182 aa9.63□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Rbm15bQ6PHZ5 887 aaKnown RBP9.63□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Tas2r124Q7M718 309 aa9.63□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Polr2dQ9D7M8 142 aaKnown RBP9.63□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Suclg2Q9Z2I8 433 aa9.63□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Ptgs1P22437 602 aa9.63□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 LarsQ8BMJ2 1178 aa9.63□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Fermt2Q8CIB5 680 aa9.63□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Trmt44Q9D2Q2 713 aa9.63□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Tfcp2Q9ERA0 502 aa9.63□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Rbm12b2Q66JV4 834 aaKnown RBP9.62□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 ParnQ8VDG3 624 aa9.62□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Nap1l4Q78ZA7 375 aaKnown RBP9.62□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Afg3l2Q8JZQ2 802 aaKnown RBP9.62□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Ano3A2AHL1 981 aa9.62□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Brpf3B2KF05 1204 aaKnown RBP9.62□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Luc7lQ9CYI4 371 aaKnown RBP9.62□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Tmem109Q3UBX0 243 aa9.62□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Tsg101Q61187 391 aa9.62□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Ttll4Q80UG8 1193 aa9.62□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Lrrc8aQ80WG5 810 aa9.62□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Pcdhb5Q91XZ5 792 aa9.62□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Tspyl4Q8VD63 406 aa9.62□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Efhd1Q9D4J1 240 aa9.62□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 MicalclQ9D5U9 680 aa9.62□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 LrmpQ60664 539 aa9.61□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Edrf1Q6GQV7 1239 aa9.61□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Fam13bQ8K2H3 851 aa9.61□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Arhgef6Q8K4I3 771 aa9.61□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 BcorQ8CGN4 1759 aa9.61□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 A0A0U1RNP2 1173 aa9.61□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Arid3aQ62431 601 aa9.61□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Ppm1eQ80TL0 749 aa9.61□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Amigo3Q8C2S7 508 aa9.61□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Amhr2Q8K592 568 aa9.61□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Eif4enif1Q9EST3 983 aaKnown RBP9.61□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Cyp3a25O09158 503 aa9.61□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Terf1P70371 421 aa9.61□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Ces1dQ8VCT4 565 aa9.61□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Pcdhb15Q91Y04 786 aa9.61□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Arid4aF8VPQ2 1261 aaKnown RBP9.61□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Anp32eP97822 260 aaKnown RBP9.61□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Kiaa1524Q8BWY9 907 aa9.61□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Pus7lQ8CE46 702 aa9.61□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Uso1Q9Z1Z0 959 aaKnown RBP9.61□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Dync1i1O88485 628 aa9.61□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Bach1P97302 739 aa9.61□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Kiaa1468Q148V7 1216 aa9.61□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 TrhQ62361 256 aa9.61□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Zrsr2Q62377 462 aaKnown RBP9.61□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 4931408C20RikE9PWP9 1381 aa9.6□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Fam186bD3Z420 943 aa9.6□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 U2af2P26369 475 aaKnown RBP9.6□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Jdp2P97875 163 aa9.6□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Znf568E9PYI1 671 aa9.6□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Snai1Q02085 264 aa9.6□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 AsnsQ61024 561 aa9.6□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Tmem179Q8BHH9 233 aa9.6□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Maats1Q8BRC6 783 aa9.6□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Serpina10Q8R121 448 aa9.6□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Rbm19Q8R3C6 952 aaKnown RBP9.6□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Dusp10Q9ESS0 483 aa9.6□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Plekhf1Q3TB82 279 aa9.6□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Frmd3Q8BHD4 595 aa9.6□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Stn1Q8K2X3 378 aa9.6□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Fam84aQ9D650 292 aa9.6□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 CpdO89001 1377 aa9.6□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Zscan18E9PUD6 809 aa9.6□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Rhpn1Q61085 643 aa9.6□□□□□ -0.87
Sf3b1-201ENSMUST00000027127 Krt18P05784 423 aa9.6□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 24.5 ms