RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Fbxl15Q91W61 300 aa10.23□□□□□ -0.77
Rnf4-204ENSMUST00000182047 MtorQ9JLN9 2549 aa10.23□□□□□ -0.77
Rnf4-204ENSMUST00000182047 Trav21-dv12A0A075B6C4 109 aa10.23□□□□□ -0.77
Rnf4-204ENSMUST00000182047 Gm9242J3QNY1 357 aa10.23□□□□□ -0.77
Rnf4-204ENSMUST00000182047 Gata3P23772 443 aa10.23□□□□□ -0.77
Rnf4-204ENSMUST00000182047 Ripply2Q2WG76 128 aa10.23□□□□□ -0.77
Rnf4-204ENSMUST00000182047 Trav2Q5R1I9 109 aa10.23□□□□□ -0.77
Rnf4-204ENSMUST00000182047 Slc16a4Q8R0M8 500 aa10.23□□□□□ -0.77
Rnf4-204ENSMUST00000182047 Dusp14Q9JLY7 198 aa10.23□□□□□ -0.77
Rnf4-204ENSMUST00000182047 Tenm3Q9WTS6 2715 aa10.23□□□□□ -0.77
Rnf4-204ENSMUST00000182047 Cited2O35740 269 aa10.23□□□□□ -0.77
Rnf4-204ENSMUST00000182047 C2cd3Q52KB6 2323 aa10.23□□□□□ -0.77
Rnf4-204ENSMUST00000182047 Sec11aQ9R0P6 179 aa10.23□□□□□ -0.77
Rnf4-204ENSMUST00000182047 Arl3Q9WUL7 182 aa10.23□□□□□ -0.77
Rnf4-204ENSMUST00000182047 Znf239P24399 201 aa10.22□□□□□ -0.77
Rnf4-204ENSMUST00000182047 Gm12888Q3UW77 119 aa10.22□□□□□ -0.77
Rnf4-204ENSMUST00000182047 Gm9961Q8BNV2 113 aa10.22□□□□□ -0.77
Rnf4-204ENSMUST00000182047 Erg28Q9ERY9 140 aa10.22□□□□□ -0.77
Rnf4-204ENSMUST00000182047 Gm29289A0A087WPY7 166 aa10.22□□□□□ -0.77
Rnf4-204ENSMUST00000182047 Gm4064A0A087WR82 380 aa10.22□□□□□ -0.77
Rnf4-204ENSMUST00000182047 Gm10352B2RWR6 380 aa10.22□□□□□ -0.77
Rnf4-204ENSMUST00000182047 Gm21693J3QK27 380 aa10.22□□□□□ -0.77
Rnf4-204ENSMUST00000182047 Rbmy1a1O35698 380 aa10.22□□□□□ -0.77
Rnf4-204ENSMUST00000182047 Stxbp6Q8R3T5 210 aa10.22□□□□□ -0.77
Rnf4-204ENSMUST00000182047 Spcs1Q9D958 161 aa10.22□□□□□ -0.77
Rnf4-204ENSMUST00000182047 P01794 123 aa10.21□□□□□ -0.77
Rnf4-204ENSMUST00000182047 Rpl24Q8BP67 157 aaKnown RBP10.21□□□□□ -0.77
Rnf4-204ENSMUST00000182047 Cnn3Q9DAW9 330 aaKnown RBP10.21□□□□□ -0.77
Rnf4-204ENSMUST00000182047 Ighv1-22A0A075B5U7 117 aa10.21□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Socs3O35718 225 aa10.21□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Gm10226O88253 85 aa10.21□□□□□ -0.78
Rnf4-204ENSMUST00000182047 P01756 117 aa10.21□□□□□ -0.78
Rnf4-204ENSMUST00000182047 P01757 117 aa10.21□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Smim15Q3UTD9 74 aa10.21□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Map1lc3aQ91VR7 121 aa10.21□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Ube2tQ9CQ37 204 aa10.21□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Hspb8Q9JK92 196 aa10.21□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Igkv4-59A0A0B4J1I8 117 aa10.2□□□□□ -0.78
Rnf4-204ENSMUST00000182047 MsmbO08540 113 aa10.2□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Pde6hP61249 83 aa10.2□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Spock3Q8BKV0 436 aa10.2□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Ufc1Q9CR09 167 aa10.2□□□□□ -0.78
Rnf4-204ENSMUST00000182047 8030423J24RikQ9CX45 142 aa10.2□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Rif1Q6PR54 2419 aaKnown RBP10.2□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Tmem136Q3TYE7 245 aa10.2□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Vsig8Q6P3A4 417 aa10.2□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Gpx1P11352 201 aa10.2□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Gm5089A1L3C8 106 aa10.19□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Tcte2E9PY37 120 aa10.19□□□□□ -0.78
Rnf4-204ENSMUST00000182047 TcraP01849 138 aa10.19□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Htr1dQ61224 374 aa10.19□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Rnf185Q91YT2 192 aa10.19□□□□□ -0.78
Rnf4-204ENSMUST00000182047 CtrlQ9ER05 264 aa10.19□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Igkv4-81A0A0G2JEY5 119 aa10.19□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Olfr322Q5NCC8 327 aa10.19□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Olfr317Q5NCD6 327 aa10.19□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Chd6A3KFM7 2711 aa10.19□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Ccdc71lE9Q4T4 218 aa10.18□□□□□ -0.78
Rnf4-204ENSMUST00000182047 SbpP15501 199 aa10.18□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Gm5150Q1AN92 299 aa10.18□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Khdc1aQ3UWR2 166 aa10.18□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Usp9yF8VPU6 2556 aa10.18□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Ighv2-6A0A075B6A7 116 aa10.18□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Itgb1bp1O35671 200 aa10.18□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Gp9O88186 177 aa10.18□□□□□ -0.78
Rnf4-204ENSMUST00000182047 H2-DMb1P35737 261 aa10.18□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Usmg5Q78IK2 58 aa10.18□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Gm10118Q8C8J5 116 aa10.18□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Olfr498Q8VEW2 330 aa10.18□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Shisa9Q9CZN4 424 aa10.18□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Epg5Q80TA9 2572 aa10.17□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Trav14-2A0A075B694 121 aa10.17□□□□□ -0.78
Rnf4-204ENSMUST00000182047 MycbQ6P8Z1 170 aa10.17□□□□□ -0.78
Rnf4-204ENSMUST00000182047 A130051J06RikQ8CAU1 227 aa10.17□□□□□ -0.78
Rnf4-204ENSMUST00000182047 A730046J19RikA0A1B0GSN8 89 aa10.17□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Khdc1cQ4KL78 166 aa10.17□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Olfr553Q7TRS6 326 aa10.17□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Il22ra1Q80XZ4 581 aa10.17□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Myo18bE9PV66 2605 aa10.17□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Gm33815A0A087WNV3 176 aa10.17□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Gm29644A0A087WPG2 191 aa10.17□□□□□ -0.78
Rnf4-204ENSMUST00000182047 H2al2bA9Z055 111 aa10.17□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Tdgf1P51865 171 aa10.17□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Spink10Q8CAC8 162 aa10.17□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Ndufc2Q9CQ54 120 aa10.16□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Tmem89Q9DA04 169 aa10.16□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Trav16d-dv11A0A075B617 117 aa10.16□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Vsig4F6TUL9 280 aa10.16□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Fgf6P21658 208 aa10.16□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Odf3l1Q810P2 275 aa10.16□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Lypd1Q8BLC3 141 aa10.16□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Gtf2h5Q8K2X8 71 aa10.16□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Fmc1Q9CR13 113 aa10.16□□□□□ -0.78
Rnf4-204ENSMUST00000182047 SNORCQ9CXL7 121 aa10.16□□□□□ -0.78
Rnf4-204ENSMUST00000182047 P01727 129 aa10.15□□□□□ -0.78
Rnf4-204ENSMUST00000182047 P01801 115 aa10.15□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Cfc1P97766 202 aa10.15□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Try10Q792Z1 246 aaKnown RBP10.15□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Gng4P50153 75 aa10.15□□□□□ -0.78
Rnf4-204ENSMUST00000182047 Gm5941Q497P9 117 aa10.15□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 55.3 ms