RNA–Protein interactions for RNA: ENSMUST00000092971.12

Chd3-201, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Chd3, Length 6,066 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-201ENSMUST00000092971 EpopQ7TNS8 369 aa11.99□□□□□ -0.49
Chd3-201ENSMUST00000092971 Igkv1-88A0A140T8N1 120 aa11.98□□□□□ -0.49
Chd3-201ENSMUST00000092971 Ociad2Q9D8W7 154 aa11.98□□□□□ -0.49
Chd3-201ENSMUST00000092971 Trav14-3A0A075B607 120 aa11.98□□□□□ -0.49
Chd3-201ENSMUST00000092971 Gm17472A0A075B683 117 aa11.98□□□□□ -0.49
Chd3-201ENSMUST00000092971 Tcl1b2P56841 117 aa11.98□□□□□ -0.49
Chd3-201ENSMUST00000092971 Ypel3P61237 119 aa11.98□□□□□ -0.49
Chd3-201ENSMUST00000092971 Igkv6-15A0A140T8M5 115 aa11.98□□□□□ -0.49
Chd3-201ENSMUST00000092971 Gm10553J3QPF1 123 aa11.98□□□□□ -0.49
Chd3-201ENSMUST00000092971 P01660 111 aa11.98□□□□□ -0.49
Chd3-201ENSMUST00000092971 Ttc6G3UYY4 1857 aa11.98□□□□□ -0.49
Chd3-201ENSMUST00000092971 A930003A15RikQ3U552 87 aa11.97□□□□□ -0.49
Chd3-201ENSMUST00000092971 Fxyd1Q9Z239 92 aa11.97□□□□□ -0.49
Chd3-201ENSMUST00000092971 Trav9n-2A0A0G2JDP3 113 aa11.97□□□□□ -0.49
Chd3-201ENSMUST00000092971 AmelxP63277 210 aa11.97□□□□□ -0.49
Chd3-201ENSMUST00000092971 P01725 110 aa11.97□□□□□ -0.49
Chd3-201ENSMUST00000092971 Cfap126Q6P8X9 189 aa11.97□□□□□ -0.49
Chd3-201ENSMUST00000092971 Dennd4aE9Q8V6 1869 aa11.97□□□□□ -0.49
Chd3-201ENSMUST00000092971 Cnot1Q6ZQ08 2375 aaKnown RBP11.97□□□□□ -0.49
Chd3-201ENSMUST00000092971 Tomm6Q9CQN3 74 aa11.97□□□□□ -0.49
Chd3-201ENSMUST00000092971 Erdr1J3QMM0 206 aa11.96□□□□□ -0.49
Chd3-201ENSMUST00000092971 Slc25a48Q8BW66 306 aa11.96□□□□□ -0.49
Chd3-201ENSMUST00000092971 Gbf1Q6DFZ1 1861 aa11.96□□□□□ -0.49
Chd3-201ENSMUST00000092971 Cysrt1Q9D1E4 142 aa11.96□□□□□ -0.49
Chd3-201ENSMUST00000092971 Zc2hc1bQ9D534 172 aa11.96□□□□□ -0.49
Chd3-201ENSMUST00000092971 Igkv3-10A0A0G2JGN0 119 aa11.96□□□□□ -0.5
Chd3-201ENSMUST00000092971 CrygdP04342 174 aa11.96□□□□□ -0.5
Chd3-201ENSMUST00000092971 Nrxn2E9Q7X7 1710 aa11.96□□□□□ -0.5
Chd3-201ENSMUST00000092971 Dock3Q8CIQ7 2027 aa11.96□□□□□ -0.5
Chd3-201ENSMUST00000092971 9530003J23RikQ8BM26 151 aa11.96□□□□□ -0.5
Chd3-201ENSMUST00000092971 Foxs1Q61574 329 aa11.95□□□□□ -0.5
Chd3-201ENSMUST00000092971 Trav13-2A0A075B649 110 aa11.95□□□□□ -0.5
Chd3-201ENSMUST00000092971 Ang4Q3TMQ6 144 aa11.95□□□□□ -0.5
Chd3-201ENSMUST00000092971 Rspo3Q2TJ95 277 aa11.94□□□□□ -0.5
Chd3-201ENSMUST00000092971 FancmQ8BGE5 2021 aa11.94□□□□□ -0.5
Chd3-201ENSMUST00000092971 Myo7bQ99MZ6 2113 aa11.94□□□□□ -0.5
Chd3-201ENSMUST00000092971 9930022D16RikQ8BG27 128 aa11.94□□□□□ -0.5
Chd3-201ENSMUST00000092971 Heatr5aQ5PRF0 2038 aa11.94□□□□□ -0.5
Chd3-201ENSMUST00000092971 Trav9-2A0A075B647 113 aa11.94□□□□□ -0.5
Chd3-201ENSMUST00000092971 Trav9-4A0A0B4J1K2 113 aa11.94□□□□□ -0.5
Chd3-201ENSMUST00000092971 Tal2Q62282 108 aa11.94□□□□□ -0.5
Chd3-201ENSMUST00000092971 Gm20379A0A087WR34 119 aa11.94□□□□□ -0.5
Chd3-201ENSMUST00000092971 Ighv5-9-1A0A0A6YVS4 126 aa11.94□□□□□ -0.5
Chd3-201ENSMUST00000092971 Gm11733Q8BQP1 125 aa11.94□□□□□ -0.5
Chd3-201ENSMUST00000092971 Tmem210Q9D2F0 147 aa11.94□□□□□ -0.5
Chd3-201ENSMUST00000092971 Trav13n-1A0A0G2JEU8 110 aa11.93□□□□□ -0.5
Chd3-201ENSMUST00000092971 Ccl25O35903 144 aa11.93□□□□□ -0.5
Chd3-201ENSMUST00000092971 Igkv2-109A0A075B5K6 120 aa11.93□□□□□ -0.5
Chd3-201ENSMUST00000092971 Ndufa1O35683 70 aa11.93□□□□□ -0.5
Chd3-201ENSMUST00000092971 PtprdQ64487 1912 aa11.93□□□□□ -0.5
Chd3-201ENSMUST00000092971 Ighv8-2A0A0A6YW58 119 aa11.93□□□□□ -0.5
Chd3-201ENSMUST00000092971 Zfp646Q6NV66 1788 aa11.92□□□□□ -0.5
Chd3-201ENSMUST00000092971 Igkv8-18A0A0B4J1J3 123 aa11.92□□□□□ -0.5
Chd3-201ENSMUST00000092971 TncQ80YX1 2110 aa11.92□□□□□ -0.5
Chd3-201ENSMUST00000092971 Mbd6Q3TY92 1003 aa11.92□□□□□ -0.5
Chd3-201ENSMUST00000092971 Gm5941Q497P9 117 aa11.92□□□□□ -0.5
Chd3-201ENSMUST00000092971 Pom121l2Q5SW25 972 aa11.92□□□□□ -0.5
Chd3-201ENSMUST00000092971 Wnk1P83741 2377 aa11.92□□□□□ -0.5
Chd3-201ENSMUST00000092971 Ighv3-1A0A075B5S6 116 aa11.92□□□□□ -0.5
Chd3-201ENSMUST00000092971 Trav13d-4A0A0G2JFX3 110 aa11.92□□□□□ -0.5
Chd3-201ENSMUST00000092971 Trbv14A0A140T8L9 115 aa11.92□□□□□ -0.5
Chd3-201ENSMUST00000092971 Slc25a29Q8BL03 306 aa11.92□□□□□ -0.5
Chd3-201ENSMUST00000092971 Dock4P59764 1978 aa11.92□□□□□ -0.5
Chd3-201ENSMUST00000092971 Ighv1-64A0A075B5X3 117 aa11.92□□□□□ -0.5
Chd3-201ENSMUST00000092971 Trav13n-2A0A0G2JF93 110 aa11.92□□□□□ -0.5
Chd3-201ENSMUST00000092971 Klk12B2RVZ0 247 aa11.92□□□□□ -0.5
Chd3-201ENSMUST00000092971 BikO70337 150 aa11.92□□□□□ -0.5
Chd3-201ENSMUST00000092971 Tnfrsf26P83626 204 aa11.92□□□□□ -0.5
Chd3-201ENSMUST00000092971 Trav13d-1A0A075B606 110 aa11.91□□□□□ -0.5
Chd3-201ENSMUST00000092971 Gm21994F6T2D2 329 aa11.91□□□□□ -0.5
Chd3-201ENSMUST00000092971 Prop1P97458 223 aa11.91□□□□□ -0.5
Chd3-201ENSMUST00000092971 Dand5Q76LW6 185 aa11.91□□□□□ -0.5
Chd3-201ENSMUST00000092971 Arid1bE9Q4N7 2244 aa11.91□□□□□ -0.5
Chd3-201ENSMUST00000092971 Iglv1A0A075B663 117 aa11.91□□□□□ -0.5
Chd3-201ENSMUST00000092971 Igkv3-5A0A140T8M6 119 aa11.91□□□□□ -0.5
Chd3-201ENSMUST00000092971 Gm10518F6UQQ9 182 aa11.91□□□□□ -0.5
Chd3-201ENSMUST00000092971 Lst1O08843 95 aa11.91□□□□□ -0.5
Chd3-201ENSMUST00000092971 SptssbQ925E8 76 aa11.91□□□□□ -0.5
Chd3-201ENSMUST00000092971 Gtsf1Q9DAN6 167 aa11.91□□□□□ -0.5
Chd3-201ENSMUST00000092971 Ighv1-74A0A0G2JGK2 117 aa11.91□□□□□ -0.5
Chd3-201ENSMUST00000092971 Nxph4G3X9N5 304 aa11.91□□□□□ -0.5
Chd3-201ENSMUST00000092971 Tmem30bQ8BHG3 353 aa11.91□□□□□ -0.5
Chd3-201ENSMUST00000092971 Trav13-1A0A075B644 110 aa11.9□□□□□ -0.5
Chd3-201ENSMUST00000092971 Ang3P97802 145 aa11.9□□□□□ -0.5
Chd3-201ENSMUST00000092971 LenepQ9WVB6 61 aa11.9□□□□□ -0.5
Chd3-201ENSMUST00000092971 Brca1P48754 1812 aa11.9□□□□□ -0.5
Chd3-201ENSMUST00000092971 CenpeQ6RT24 2474 aaKnown RBP11.9□□□□□ -0.5
Chd3-201ENSMUST00000092971 C920008G01RikA0A0B4J1N1 112 aa11.9□□□□□ -0.5
Chd3-201ENSMUST00000092971 4930442H23RikQ9D5G7 103 aa11.9□□□□□ -0.5
Chd3-201ENSMUST00000092971 PkdrejQ9Z0T6 2126 aa11.9□□□□□ -0.5
Chd3-201ENSMUST00000092971 Egr2P08152 470 aa11.9□□□□□ -0.51
Chd3-201ENSMUST00000092971 C730034F03RikQ8BGL5 111 aa11.9□□□□□ -0.51
Chd3-201ENSMUST00000092971 Tmem14cQ9CQN6 114 aa11.9□□□□□ -0.51
Chd3-201ENSMUST00000092971 1700074P13RikQ9D9G7 251 aa11.9□□□□□ -0.51
Chd3-201ENSMUST00000092971 B230359F08RikA0A0B4J1K3 109 aa11.89□□□□□ -0.51
Chd3-201ENSMUST00000092971 3110082J24RikF6Z6Z2 108 aa11.89□□□□□ -0.51
Chd3-201ENSMUST00000092971 4933414I15RikQ9D4D5 133 aa11.89□□□□□ -0.51
Chd3-201ENSMUST00000092971 Trav7-6A0A075B640 112 aa11.89□□□□□ -0.51
Chd3-201ENSMUST00000092971 Frem1Q684R7 2191 aa11.89□□□□□ -0.51
Chd3-201ENSMUST00000092971 Igkv1-35A0A0G2JDE5 120 aa11.89□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 139.8 ms