RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Dazap2Q9DCP9 168 aa8.65□□□□□ -1.02
Ciita-201ENSMUST00000023147 Ighv5-9-1A0A0A6YVS4 126 aa8.65□□□□□ -1.02
Ciita-201ENSMUST00000023147 Tnfrsf13bQ9ET35 249 aa8.65□□□□□ -1.02
Ciita-201ENSMUST00000023147 P01658 132 aa8.65□□□□□ -1.03
Ciita-201ENSMUST00000023147 Ndufa4Q62425 82 aaKnown RBP8.65□□□□□ -1.03
Ciita-201ENSMUST00000023147 Gm5105Q8C6Y9 112 aa8.65□□□□□ -1.03
Ciita-201ENSMUST00000023147 Rasl10aQ8K5A4 203 aa8.65□□□□□ -1.03
Ciita-201ENSMUST00000023147 Igkv6-13A0A0G2JGY3 119 aa8.64□□□□□ -1.03
Ciita-201ENSMUST00000023147 Wt1P22561 449 aa8.64□□□□□ -1.03
Ciita-201ENSMUST00000023147 Trav14-3A0A075B607 120 aa8.64□□□□□ -1.03
Ciita-201ENSMUST00000023147 Smim10l1A0A087WNQ7 89 aa8.64□□□□□ -1.03
Ciita-201ENSMUST00000023147 Gm33815A0A087WNV3 176 aa8.64□□□□□ -1.03
Ciita-201ENSMUST00000023147 PemtQ61907 199 aa8.64□□□□□ -1.03
Ciita-201ENSMUST00000023147 Pygo2Q80V76 405 aa8.64□□□□□ -1.03
Ciita-201ENSMUST00000023147 Fam24aQ8CF27 98 aa8.64□□□□□ -1.03
Ciita-201ENSMUST00000023147 SelenokQ9JLJ1 94 aa8.64□□□□□ -1.03
Ciita-201ENSMUST00000023147 Med13lQ6JPI3 2207 aa8.64□□□□□ -1.03
Ciita-201ENSMUST00000023147 Gata1P17679 413 aa8.63□□□□□ -1.03
Ciita-201ENSMUST00000023147 Gata3P23772 443 aa8.63□□□□□ -1.03
Ciita-201ENSMUST00000023147 OtosQ8R448 89 aa8.63□□□□□ -1.03
Ciita-201ENSMUST00000023147 Mrpl32Q9DCI9 187 aaKnown RBP8.63□□□□□ -1.03
Ciita-201ENSMUST00000023147 9130213A22RikQ3V3T2 120 aa8.63□□□□□ -1.03
Ciita-201ENSMUST00000023147 Mapk1ip1lQ8BH93 242 aa8.63□□□□□ -1.03
Ciita-201ENSMUST00000023147 Iglv1A0A075B663 117 aa8.63□□□□□ -1.03
Ciita-201ENSMUST00000023147 Ighv1-69A0A0G2JFS5 117 aa8.63□□□□□ -1.03
Ciita-201ENSMUST00000023147 Gm20517G3UVU6 152 aa8.63□□□□□ -1.03
Ciita-201ENSMUST00000023147 GfyJ3KML8 504 aa8.63□□□□□ -1.03
Ciita-201ENSMUST00000023147 P01788 123 aa8.63□□□□□ -1.03
Ciita-201ENSMUST00000023147 Mrpl52Q9D0Y8 121 aa8.63□□□□□ -1.03
Ciita-201ENSMUST00000023147 GlrxQ9QUH0 107 aa8.62□□□□□ -1.03
Ciita-201ENSMUST00000023147 Brd3osA0A1B0GRB6 84 aa8.62□□□□□ -1.03
Ciita-201ENSMUST00000023147 B1ARW8 110 aa8.62□□□□□ -1.03
Ciita-201ENSMUST00000023147 Ndufa12Q7TMF3 145 aaKnown RBP8.62□□□□□ -1.03
Ciita-201ENSMUST00000023147 Fam110aQ8R184 296 aa8.62□□□□□ -1.03
Ciita-201ENSMUST00000023147 Trav14-2A0A075B694 121 aa8.62□□□□□ -1.03
Ciita-201ENSMUST00000023147 P0C1Z5 52 aa8.62□□□□□ -1.03
Ciita-201ENSMUST00000023147 Ppp1r32Q148A4 427 aa8.62□□□□□ -1.03
Ciita-201ENSMUST00000023147 Tal2Q62282 108 aa8.62□□□□□ -1.03
Ciita-201ENSMUST00000023147 Gm12830F6XVH0 157 aa8.62□□□□□ -1.03
Ciita-201ENSMUST00000023147 Gm5294J3QP53 216 aa8.62□□□□□ -1.03
Ciita-201ENSMUST00000023147 Spink12Q9D256 87 aa8.62□□□□□ -1.03
Ciita-201ENSMUST00000023147 Frem1Q684R7 2191 aa8.62□□□□□ -1.03
Ciita-201ENSMUST00000023147 Trav9-1A0A075B601 112 aa8.61□□□□□ -1.03
Ciita-201ENSMUST00000023147 Trav4n-4A0A075B615 110 aa8.61□□□□□ -1.03
Ciita-201ENSMUST00000023147 Igkv8-18A0A0B4J1J3 123 aa8.61□□□□□ -1.03
Ciita-201ENSMUST00000023147 Trav7-1A0A0G2JEV5 112 aa8.61□□□□□ -1.03
Ciita-201ENSMUST00000023147 BB014433Q8C5R5 389 aa8.61□□□□□ -1.03
Ciita-201ENSMUST00000023147 SptssbQ925E8 76 aa8.61□□□□□ -1.03
Ciita-201ENSMUST00000023147 Notch2O35516 2470 aa8.61□□□□□ -1.03
Ciita-201ENSMUST00000023147 Igkv3-10A0A0G2JGN0 119 aa8.61□□□□□ -1.03
Ciita-201ENSMUST00000023147 Synj2bpQ9D6K5 145 aa8.61□□□□□ -1.03
Ciita-201ENSMUST00000023147 Gm4861Q8C5A4 106 aa8.61□□□□□ -1.03
Ciita-201ENSMUST00000023147 Prop1P97458 223 aa8.61□□□□□ -1.03
Ciita-201ENSMUST00000023147 Cd33Q63994 403 aa8.61□□□□□ -1.03
Ciita-201ENSMUST00000023147 P01630 113 aa8.6□□□□□ -1.03
Ciita-201ENSMUST00000023147 Lyrm9Q3UN90 78 aa8.6□□□□□ -1.03
Ciita-201ENSMUST00000023147 P03980 138 aa8.6□□□□□ -1.03
Ciita-201ENSMUST00000023147 Ighv8-4A0A0A6YW26 117 aa8.6□□□□□ -1.03
Ciita-201ENSMUST00000023147 Ighv13-2A0A0A6YWN3 119 aa8.6□□□□□ -1.03
Ciita-201ENSMUST00000023147 Wfdc9Q3UW41 83 aa8.6□□□□□ -1.03
Ciita-201ENSMUST00000023147 Ang2Q64438 145 aa8.6□□□□□ -1.03
Ciita-201ENSMUST00000023147 Brwd1Q921C3 2304 aa8.6□□□□□ -1.03
Ciita-201ENSMUST00000023147 Trav6-6A0A075B603 114 aa8.6□□□□□ -1.03
Ciita-201ENSMUST00000023147 Trav6n-6A0A075B6B2 114 aa8.6□□□□□ -1.03
Ciita-201ENSMUST00000023147 Ifitm1Q9D103 106 aa8.59□□□□□ -1.03
Ciita-201ENSMUST00000023147 Zfp951A0A087WRH0 451 aa8.59□□□□□ -1.03
Ciita-201ENSMUST00000023147 Them7Q9DCP4 223 aa8.59□□□□□ -1.03
Ciita-201ENSMUST00000023147 Ramp1Q9WTJ5 148 aa8.59□□□□□ -1.03
Ciita-201ENSMUST00000023147 Trav9d-4A0A0G2JG37 103 aa8.59□□□□□ -1.03
Ciita-201ENSMUST00000023147 P01674 108 aa8.59□□□□□ -1.03
Ciita-201ENSMUST00000023147 P01789 122 aa8.59□□□□□ -1.03
Ciita-201ENSMUST00000023147 PpbpQ9EQI5 113 aa8.59□□□□□ -1.03
Ciita-201ENSMUST00000023147 P01787 123 aa8.59□□□□□ -1.04
Ciita-201ENSMUST00000023147 Igll1P20764 209 aa8.59□□□□□ -1.04
Ciita-201ENSMUST00000023147 Il22ra2Q80XF5 230 aa8.59□□□□□ -1.04
Ciita-201ENSMUST00000023147 Prok2Q9QXU7 128 aa8.59□□□□□ -1.04
Ciita-201ENSMUST00000023147 Trav9d-1A0A075B699 112 aa8.58□□□□□ -1.04
Ciita-201ENSMUST00000023147 Reg3gO09049 174 aa8.58□□□□□ -1.04
Ciita-201ENSMUST00000023147 Egr2P08152 470 aa8.58□□□□□ -1.04
Ciita-201ENSMUST00000023147 Sec61gP60060 68 aa8.58□□□□□ -1.04
Ciita-201ENSMUST00000023147 Foxc1Q61572 553 aa8.58□□□□□ -1.04
Ciita-201ENSMUST00000023147 Card19Q9D1I2 183 aa8.58□□□□□ -1.04
Ciita-201ENSMUST00000023147 Spg11Q3UHA3 2430 aa8.58□□□□□ -1.04
Ciita-201ENSMUST00000023147 1700084M14RikB1AT01 78 aa8.58□□□□□ -1.04
Ciita-201ENSMUST00000023147 P01649 108 aa8.58□□□□□ -1.04
Ciita-201ENSMUST00000023147 CrygbP04344 175 aa8.58□□□□□ -1.04
Ciita-201ENSMUST00000023147 Gm5468Q8C3D3 155 aa8.58□□□□□ -1.04
Ciita-201ENSMUST00000023147 Tmem243B2RVB9 118 aa8.58□□□□□ -1.04
Ciita-201ENSMUST00000023147 Gm20499D3Z4G5 72 aa8.58□□□□□ -1.04
Ciita-201ENSMUST00000023147 Lect2O88803 151 aa8.58□□□□□ -1.04
Ciita-201ENSMUST00000023147 Sdhaf1Q3U276 118 aa8.58□□□□□ -1.04
Ciita-201ENSMUST00000023147 Gm12253Q5NC48 229 aa8.58□□□□□ -1.04
Ciita-201ENSMUST00000023147 A530064D06RikQ8BNV8 229 aa8.58□□□□□ -1.04
Ciita-201ENSMUST00000023147 Ucn2Q99ML8 113 aa8.58□□□□□ -1.04
Ciita-201ENSMUST00000023147 Tmem263Q9DAM7 115 aa8.58□□□□□ -1.04
Ciita-201ENSMUST00000023147 Bub3Q9WVA3 326 aa8.58□□□□□ -1.04
Ciita-201ENSMUST00000023147 IappP12968 93 aa8.58□□□□□ -1.04
Ciita-201ENSMUST00000023147 Gm10384Q3UQ87 92 aa8.58□□□□□ -1.04
Ciita-201ENSMUST00000023147 Fhl3Q9R059 289 aa8.58□□□□□ -1.04
Ciita-201ENSMUST00000023147 P01728 117 aa8.57□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 42.7 ms