RNA–Protein interactions for RNA: ENSMUST00000022327.12

Ldb3-201, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ldb3, Length 5,119 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-201ENSMUST00000022327 Prpf8Q99PV0 2335 aaKnown RBP9.66□□□□□ -0.86
Ldb3-201ENSMUST00000022327 Gm20708H3BKF4 155 aa9.65□□□□□ -0.86
Ldb3-201ENSMUST00000022327 Gp9O88186 177 aa9.65□□□□□ -0.86
Ldb3-201ENSMUST00000022327 Hist1h4aP62806 103 aaKnown RBP9.65□□□□□ -0.86
Ldb3-201ENSMUST00000022327 Ccl21aP84444 133 aa9.65□□□□□ -0.86
Ldb3-201ENSMUST00000022327 Ccl21bP86792 133 aa9.65□□□□□ -0.86
Ldb3-201ENSMUST00000022327 Ccl21cP86793 133 aa9.65□□□□□ -0.86
Ldb3-201ENSMUST00000022327 Ncor2Q9WU42 2472 aaKnown RBP9.65□□□□□ -0.86
Ldb3-201ENSMUST00000022327 Ca1P13634 261 aa9.65□□□□□ -0.86
Ldb3-201ENSMUST00000022327 Igkv3-9A0A140T8P4 119 aa9.65□□□□□ -0.87
Ldb3-201ENSMUST00000022327 P04944 107 aa9.65□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Xcl1P47993 114 aa9.65□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Pglyrp4Q0VB07 374 aa9.65□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Gm10604Q3V0X7 143 aa9.65□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Cd33Q63994 403 aa9.65□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Dph3Q8K0W9 82 aa9.65□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Rasl10aQ8K5A4 203 aa9.65□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Igkv4-62A0A0G2JDW9 117 aa9.64□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Ccl25O35903 144 aa9.64□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Gm6040Q4QY32 63 aa9.64□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Ccl24Q9JKC0 119 aa9.64□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Ighv1-52A0A0A6YXC3 117 aa9.64□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Samd13D3YUG0 102 aa9.64□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Fam240bJ3QMB3 78 aa9.64□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Cd24P24807 76 aa9.64□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Lage3Q9CR70 148 aa9.64□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Ighv8-8A0A0A6YXQ0 119 aa9.64□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Gm7102J3QQ10 178 aa9.64□□□□□ -0.87
Ldb3-201ENSMUST00000022327 FancmQ8BGE5 2021 aa9.63□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Arhgap21Q6DFV3 1944 aa9.63□□□□□ -0.87
Ldb3-201ENSMUST00000022327 CadB2RQC6 2225 aa9.63□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Trip12G5E870 2025 aaKnown RBP9.63□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Nup210Q9QY81 1886 aaKnown RBP9.63□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Socs3O35718 225 aa9.63□□□□□ -0.87
Ldb3-201ENSMUST00000022327 A530064D06RikQ8BNV8 229 aa9.63□□□□□ -0.87
Ldb3-201ENSMUST00000022327 P01750 117 aa9.63□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Defa28D3Z1V9 94 aa9.63□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Dad1P61804 113 aa9.63□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Defa25Q5G864 92 aa9.63□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Morn5Q9DAI9 170 aa9.63□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Tmem263Q9DAM7 115 aa9.63□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Med12A2AGH6 2190 aa9.63□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Ighv3-1A0A075B5S6 116 aa9.62□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Trbv14A0A140T8L9 115 aa9.62□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Nsun4C4P6S0 806 aaKnown RBP9.62□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Lamtor3O88653 124 aa9.62□□□□□ -0.87
Ldb3-201ENSMUST00000022327 P01794 123 aa9.62□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Lyrm9Q3UN90 78 aa9.62□□□□□ -0.87
Ldb3-201ENSMUST00000022327 BC048502Q80Y74 154 aa9.62□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Gm17324Q8C6J8 137 aa9.62□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Col5a3Q9JLI2 1739 aa9.62□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Igkv3-2A0A075B5P0 119 aa9.62□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Lect2O88803 151 aa9.62□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Defa-rs2P17534 91 aa9.62□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Rp1l1Q8CGM2 1859 aa9.62□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Mrps12O35680 139 aa9.62□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Tm2d1Q99MB3 208 aa9.61□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Mlst8Q9DCJ1 326 aa9.61□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Mpv17l2Q8VIK2 200 aa9.61□□□□□ -0.87
Ldb3-201ENSMUST00000022327 PpbpQ9EQI5 113 aa9.61□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Gm9747Q810H1 104 aa9.61□□□□□ -0.87
Ldb3-201ENSMUST00000022327 9230109A22RikQ8BHE6 111 aa9.61□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Ly6g5bQ8K1T4 194 aa9.61□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Bub3Q9WVA3 326 aa9.61□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Col24a1Q30D77 1733 aa9.61□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Gvin1Q80SU7 2427 aa9.61□□□□□ -0.87
Ldb3-201ENSMUST00000022327 GfyJ3KML8 504 aa9.61□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Vwc2lQ505H4 222 aa9.61□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Ighv6-7A0A0A6YWU3 119 aa9.6□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Gm21994F6T2D2 329 aa9.6□□□□□ -0.87
Ldb3-201ENSMUST00000022327 P01756 117 aa9.6□□□□□ -0.87
Ldb3-201ENSMUST00000022327 P01757 117 aa9.6□□□□□ -0.87
Ldb3-201ENSMUST00000022327 TncQ80YX1 2110 aa9.6□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Mapk1ip1lQ8BH93 242 aa9.6□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Fam241bQ9D882 120 aa9.6□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Igkv4-57-1A0A075B5M4 119 aa9.6□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Gm9513B3GLJ6 99 aa9.59□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Gm15128A2ADW8 449 aa9.59□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Gm15093A2BI72 449 aa9.59□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Luzp4B1AV09 449 aa9.59□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Gm15107B1B0X0 449 aa9.59□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Gm15097E9QA14 449 aa9.59□□□□□ -0.87
Ldb3-201ENSMUST00000022327 P01896 185 aa9.59□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Gm15085Q62012 449 aa9.59□□□□□ -0.87
Ldb3-201ENSMUST00000022327 PtprsB0V2N1 1907 aa9.59□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Gm15127B1AVZ5 449 aa9.59□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Gm15091B1AZM2 449 aa9.59□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Olfr311Q5NC59 308 aa9.59□□□□□ -0.87
Ldb3-201ENSMUST00000022327 NpbQ8K4P1 119 aa9.59□□□□□ -0.87
Ldb3-201ENSMUST00000022327 UrahQ9CRB3 118 aa9.59□□□□□ -0.87
Ldb3-201ENSMUST00000022327 Ighv1-12A0A0A6YXJ9 117 aa9.58□□□□□ -0.88
Ldb3-201ENSMUST00000022327 IgipA0A1B0GR74 53 aa9.58□□□□□ -0.88
Ldb3-201ENSMUST00000022327 9130230L23RikQ8CC80 163 aa9.58□□□□□ -0.88
Ldb3-201ENSMUST00000022327 Ighv1-62-2A0A0A6YXZ4 119 aa9.58□□□□□ -0.88
Ldb3-201ENSMUST00000022327 Obox8V9GWY9 217 aa9.58□□□□□ -0.88
Ldb3-201ENSMUST00000022327 Arfgef3Q3UGY8 2170 aa9.58□□□□□ -0.88
Ldb3-201ENSMUST00000022327 Cox7cP17665 63 aa9.58□□□□□ -0.88
Ldb3-201ENSMUST00000022327 7420426K07RikQ3UX66 186 aa9.58□□□□□ -0.88
Ldb3-201ENSMUST00000022327 Nbl1Q61477 178 aa9.58□□□□□ -0.88
Ldb3-201ENSMUST00000022327 MrapQ9D159 127 aa9.58□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 52.6 ms