RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 MT4P47944 62 aa2.66□□□□□ -1.98
ALMS1-208ENST00000620466 LOC100996750A0A140TA64 210 aa2.65□□□□□ -1.99
ALMS1-208ENST00000620466 FAT4Q6V0I7 4981 aa2.65□□□□□ -1.99
ALMS1-208ENST00000620466 MT1MQ8N339 61 aa2.62□□□□□ -1.99
ALMS1-208ENST00000620466 KRTAP4-3Q9BYR4 195 aa2.62□□□□□ -1.99
ALMS1-208ENST00000620466 RNF213Q63HN8 5207 aa2.61□□□□□ -1.99
ALMS1-208ENST00000620466 KRTAP19-7Q3SYF9 63 aa2.61□□□□□ -1.99
ALMS1-208ENST00000620466 KRTAP19-6Q3LI70 58 aa2.6□□□□□ -1.99
ALMS1-208ENST00000620466 LCE2AQ5TA79 106 aaPredicted RBP2.56□□□□□ -2
ALMS1-208ENST00000620466 KRTAP2-3P0C7H8 128 aa2.56□□□□□ -2
ALMS1-208ENST00000620466 KRTAP2-4Q9BYR9 128 aa2.56□□□□□ -2
ALMS1-208ENST00000620466 KRTAP2-1Q9BYU5 128 aa2.56□□□□□ -2
ALMS1-208ENST00000620466 KRTAP9-2Q9BYQ4 174 aa2.54□□□□□ -2
ALMS1-208ENST00000620466 MUC2Q02817 5179 aa2.53□□□□□ -2
ALMS1-208ENST00000620466 PRM1P04553 51 aa2.53□□□□□ -2
ALMS1-208ENST00000620466 LCE1BQ5T7P3 118 aa2.52□□□□□ -2.01
ALMS1-208ENST00000620466 KRTAP9-6A8MVA2 160 aa2.51□□□□□ -2.01
ALMS1-208ENST00000620466 LCE1DQ5T752 114 aa2.5□□□□□ -2.01
ALMS1-208ENST00000620466 UBR4Q5T4S7 5183 aa2.45□□□□□ -2.02
ALMS1-208ENST00000620466 KRTAP4-9Q9BYQ8 210 aa2.44□□□□□ -2.02
ALMS1-208ENST00000620466 KRTAP9-6A0A140TA67 174 aa2.43□□□□□ -2.02
ALMS1-208ENST00000620466 KRTAP20-1Q3LI63 56 aa2.42□□□□□ -2.02
ALMS1-208ENST00000620466 MT1AP04731 61 aa2.41□□□□□ -2.02
ALMS1-208ENST00000620466 LCE5AQ5TCM9 118 aa2.4□□□□□ -2.03
ALMS1-208ENST00000620466 KRTAP6-1Q3LI64 71 aa2.34□□□□□ -2.03
ALMS1-208ENST00000620466 KRTAP9-7A8MTY7 169 aa2.27□□□□□ -2.05
ALMS1-208ENST00000620466 FSIP2Q5CZC0 6907 aa2.26□□□□□ -2.05
ALMS1-208ENST00000620466 KRTAP9-4Q9BYQ2 154 aa2.26□□□□□ -2.05
ALMS1-208ENST00000620466 KMT2DO14686 5537 aa2.25□□□□□ -2.05
ALMS1-208ENST00000620466 KRTAP6-2Q3LI66 62 aa2.24□□□□□ -2.05
ALMS1-208ENST00000620466 KRTAP6-3Q3LI67 103 aa2.23□□□□□ -2.05
ALMS1-208ENST00000620466 LCE1CQ5T751 118 aa2.23□□□□□ -2.05
ALMS1-208ENST00000620466 LCE1EQ5T753 118 aa2.23□□□□□ -2.05
ALMS1-208ENST00000620466 LCE1FQ5T754 118 aa2.23□□□□□ -2.05
ALMS1-208ENST00000620466 LCE1AQ5T7P2 110 aa2.23□□□□□ -2.05
ALMS1-208ENST00000620466 SYNE2Q8WXH0 6885 aaKnown RBP2.22□□□□□ -2.05
ALMS1-208ENST00000620466 LCE4AQ5TA78 99 aa2.22□□□□□ -2.05
ALMS1-208ENST00000620466 USH2AO75445 5202 aa2.21□□□□□ -2.06
ALMS1-208ENST00000620466 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.17□□□□□ -2.06
ALMS1-208ENST00000620466 KRTAP2-2Q9BYT5 123 aa2.14□□□□□ -2.07
ALMS1-208ENST00000620466 SSPOA2VEC9 5147 aa2.07□□□□□ -2.08
ALMS1-208ENST00000620466 SYNE1Q8NF91 8797 aaKnown RBP2.05□□□□□ -2.08
ALMS1-208ENST00000620466 KRTAP9-9Q9BYP9 154 aa2.02□□□□□ -2.09
ALMS1-208ENST00000620466 KRTAP5-9P26371 169 aa2□□□□□ -2.09
ALMS1-208ENST00000620466 FCGBPQ9Y6R7 5405 aaPredicted RBP1.99□□□□□ -2.09
ALMS1-208ENST00000620466 MACF1Q9UPN3 7388 aaKnown RBP1.98□□□□□ -2.09
ALMS1-208ENST00000620466 OBSCNQ5VST9 7968 aa1.94□□□□□ -2.1
ALMS1-208ENST00000620466 MUC12Q9UKN1 5478 aa1.93□□□□□ -2.1
ALMS1-208ENST00000620466 KRTAP5-5Q701N2 237 aaPredicted RBP1.93□□□□□ -2.1
ALMS1-208ENST00000620466 KRTAP4-6Q9BYQ5 205 aa1.89□□□□□ -2.11
ALMS1-208ENST00000620466 DSTQ03001 7570 aaKnown RBP1.88□□□□□ -2.11
ALMS1-208ENST00000620466 KRTAP4-11Q9BYQ6 195 aa1.87□□□□□ -2.11
ALMS1-208ENST00000620466 KRTAP20-2Q3LI61 65 aa1.84□□□□□ -2.11
ALMS1-208ENST00000620466 NEBP20929 6669 aa1.79□□□□□ -2.12
ALMS1-208ENST00000620466 KRTAP4-4Q9BYR3 166 aa1.75□□□□□ -2.13
ALMS1-208ENST00000620466 KRTAP5-4Q6L8H1 288 aa1.74□□□□□ -2.13
ALMS1-208ENST00000620466 KRTAP4-12Q9BQ66 201 aa1.73□□□□□ -2.13
ALMS1-208ENST00000620466 KRTAP4-2Q9BYR5 136 aa1.73□□□□□ -2.13
ALMS1-208ENST00000620466 MDN1Q9NU22 5596 aa1.69□□□□□ -2.14
ALMS1-208ENST00000620466 MUC5BQ9HC84 5762 aaPredicted RBP1.57□□□□□ -2.16
ALMS1-208ENST00000620466 HMCN1Q96RW7 5635 aa1.52□□□□□ -2.17
ALMS1-208ENST00000620466 MUC19Q7Z5P9 8384 aa1.49□□□□□ -2.17
ALMS1-208ENST00000620466 KRTAP5-2Q701N4 177 aa1.49□□□□□ -2.17
ALMS1-208ENST00000620466 KRTAP5-3Q6L8H2 238 aa1.48□□□□□ -2.17
ALMS1-208ENST00000620466 KRTAP5-10Q6L8G5 202 aa1.47□□□□□ -2.17
ALMS1-208ENST00000620466 GPR98Q8WXG9 6306 aa1.41□□□□□ -2.18
ALMS1-208ENST00000620466 MUC5ACP98088 5654 aa1.39□□□□□ -2.19
ALMS1-208ENST00000620466 KRTAP5-8O75690 187 aa1.34□□□□□ -2.2
ALMS1-208ENST00000620466 PHGR1C9JFL3 82 aa1.33□□□□□ -2.2
ALMS1-208ENST00000620466 KRTAP5-1Q6L8H4 278 aa1.29□□□□□ -2.2
ALMS1-208ENST00000620466 KRTAP21-2Q3LI59 83 aa1.28□□□□□ -2.2
ALMS1-208ENST00000620466 KRTAP5-11Q6L8G4 156 aa1.24□□□□□ -2.21
ALMS1-208ENST00000620466 KRTAP21-1Q3LI58 79 aa1.2□□□□□ -2.22
ALMS1-208ENST00000620466 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.2□□□□□ -2.22
ALMS1-208ENST00000620466 AHNAK2Q8IVF2 5795 aa1.18□□□□□ -2.22
ALMS1-208ENST00000620466 AHNAKQ09666 5890 aaKnown RBP1.1□□□□□ -2.23
ALMS1-208ENST00000620466 KRTAP5-7Q6L8G8 165 aa1.05□□□□□ -2.24
ALMS1-208ENST00000620466 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 9.3 ms