RNA–Protein interactions for RNA: ENST00000612199.4

SRGAP2B-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRGAP2B, Length 7,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-204ENST00000612199 KRTAP19-2Q3LHN2 52 aa3.26□□□□□ -1.89
SRGAP2B-204ENST00000612199 MUC17Q685J3 4493 aa3.24□□□□□ -1.89
SRGAP2B-204ENST00000612199 FLGP20930 4061 aaPredicted RBP3.23□□□□□ -1.89
SRGAP2B-204ENST00000612199 UBR4Q5T4S7 5183 aa3.23□□□□□ -1.89
SRGAP2B-204ENST00000612199 SYNE1Q8NF91 8797 aaKnown RBP3.2□□□□□ -1.9
SRGAP2B-204ENST00000612199 KRTAP4-7Q9BYR0 210 aa3.18□□□□□ -1.9
SRGAP2B-204ENST00000612199 KRTAP20-1Q3LI63 56 aa3.17□□□□□ -1.9
SRGAP2B-204ENST00000612199 FAT4Q6V0I7 4981 aa3.15□□□□□ -1.9
SRGAP2B-204ENST00000612199 MUC2Q02817 5179 aa3.14□□□□□ -1.91
SRGAP2B-204ENST00000612199 RNF213Q63HN8 5207 aa3.14□□□□□ -1.91
SRGAP2B-204ENST00000612199 LCE2AQ5TA79 106 aaPredicted RBP3.11□□□□□ -1.91
SRGAP2B-204ENST00000612199 PRM1P04553 51 aa3.09□□□□□ -1.91
SRGAP2B-204ENST00000612199 HMCN2Q8NDA2 5059 aa3.07□□□□□ -1.92
SRGAP2B-204ENST00000612199 KRTAP19-3Q7Z4W3 81 aa3.07□□□□□ -1.92
SRGAP2B-204ENST00000612199 MT1LQ93083 61 aa3.06□□□□□ -1.92
SRGAP2B-204ENST00000612199 KRTAP9-2Q9BYQ4 174 aa3.06□□□□□ -1.92
SRGAP2B-204ENST00000612199 MT1EP04732 61 aa3.05□□□□□ -1.92
SRGAP2B-204ENST00000612199 KRTAP9-6A0A140TA67 174 aa3.02□□□□□ -1.93
SRGAP2B-204ENST00000612199 KRTAP4-3Q9BYR4 195 aa2.99□□□□□ -1.93
SRGAP2B-204ENST00000612199 MT3P25713 68 aa2.98□□□□□ -1.93
SRGAP2B-204ENST00000612199 KRTAP19-6Q3LI70 58 aa2.98□□□□□ -1.93
SRGAP2B-204ENST00000612199 LOC100996750A0A140TA64 210 aa2.98□□□□□ -1.93
SRGAP2B-204ENST00000612199 KRTAP4-9Q9BYQ8 210 aa2.98□□□□□ -1.93
SRGAP2B-204ENST00000612199 MT1MQ8N339 61 aa2.95□□□□□ -1.94
SRGAP2B-204ENST00000612199 OBSCNQ5VST9 7968 aa2.94□□□□□ -1.94
SRGAP2B-204ENST00000612199 SYNE2Q8WXH0 6885 aaKnown RBP2.94□□□□□ -1.94
SRGAP2B-204ENST00000612199 KRTAP19-7Q3SYF9 63 aa2.88□□□□□ -1.95
SRGAP2B-204ENST00000612199 KRTAP9-7A8MTY7 169 aa2.88□□□□□ -1.95
SRGAP2B-204ENST00000612199 KMT2DO14686 5537 aa2.83□□□□□ -1.96
SRGAP2B-204ENST00000612199 FCGBPQ9Y6R7 5405 aaPredicted RBP2.82□□□□□ -1.96
SRGAP2B-204ENST00000612199 DSTQ03001 7570 aaKnown RBP2.82□□□□□ -1.96
SRGAP2B-204ENST00000612199 KRTAP9-9Q9BYP9 154 aa2.77□□□□□ -1.97
SRGAP2B-204ENST00000612199 USH2AO75445 5202 aa2.76□□□□□ -1.97
SRGAP2B-204ENST00000612199 MT1AP04731 61 aa2.76□□□□□ -1.97
SRGAP2B-204ENST00000612199 KRTAP2-3P0C7H8 128 aa2.74□□□□□ -1.97
SRGAP2B-204ENST00000612199 KRTAP2-4Q9BYR9 128 aa2.74□□□□□ -1.97
SRGAP2B-204ENST00000612199 KRTAP2-1Q9BYU5 128 aa2.74□□□□□ -1.97
SRGAP2B-204ENST00000612199 KRTAP20-2Q3LI61 65 aa2.72□□□□□ -1.97
SRGAP2B-204ENST00000612199 KRTAP9-6A8MVA2 160 aa2.69□□□□□ -1.98
SRGAP2B-204ENST00000612199 MACF1Q9UPN3 7388 aaKnown RBP2.62□□□□□ -1.99
SRGAP2B-204ENST00000612199 KRTAP6-1Q3LI64 71 aa2.61□□□□□ -1.99
SRGAP2B-204ENST00000612199 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.57□□□□□ -2
SRGAP2B-204ENST00000612199 KRTAP6-2Q3LI66 62 aa2.56□□□□□ -2
SRGAP2B-204ENST00000612199 MUC12Q9UKN1 5478 aa2.55□□□□□ -2
SRGAP2B-204ENST00000612199 KRTAP6-3Q3LI67 103 aa2.55□□□□□ -2
SRGAP2B-204ENST00000612199 KRTAP2-2Q9BYT5 123 aa2.55□□□□□ -2
SRGAP2B-204ENST00000612199 KRTAP9-4Q9BYQ2 154 aa2.5□□□□□ -2.01
SRGAP2B-204ENST00000612199 KRTAP4-6Q9BYQ5 205 aa2.47□□□□□ -2.01
SRGAP2B-204ENST00000612199 SSPOA2VEC9 5147 aa2.44□□□□□ -2.02
SRGAP2B-204ENST00000612199 KRTAP4-12Q9BQ66 201 aa2.42□□□□□ -2.02
SRGAP2B-204ENST00000612199 KRTAP4-2Q9BYR5 136 aa2.42□□□□□ -2.02
SRGAP2B-204ENST00000612199 KRTAP4-4Q9BYR3 166 aa2.4□□□□□ -2.03
SRGAP2B-204ENST00000612199 MDN1Q9NU22 5596 aa2.39□□□□□ -2.03
SRGAP2B-204ENST00000612199 KRTAP4-11Q9BYQ6 195 aa2.35□□□□□ -2.03
SRGAP2B-204ENST00000612199 MUC19Q7Z5P9 8384 aa2.34□□□□□ -2.03
SRGAP2B-204ENST00000612199 NEBP20929 6669 aa2.33□□□□□ -2.04
SRGAP2B-204ENST00000612199 KRTAP5-9P26371 169 aa2.25□□□□□ -2.05
SRGAP2B-204ENST00000612199 GPR98Q8WXG9 6306 aa2.22□□□□□ -2.05
SRGAP2B-204ENST00000612199 MUC5ACP98088 5654 aa1.99□□□□□ -2.09
SRGAP2B-204ENST00000612199 PHGR1C9JFL3 82 aa1.98□□□□□ -2.09
SRGAP2B-204ENST00000612199 KRTAP5-4Q6L8H1 288 aa1.96□□□□□ -2.1
SRGAP2B-204ENST00000612199 KRTAP5-5Q701N2 237 aaPredicted RBP1.94□□□□□ -2.1
SRGAP2B-204ENST00000612199 HMCN1Q96RW7 5635 aa1.92□□□□□ -2.1
SRGAP2B-204ENST00000612199 AHNAK2Q8IVF2 5795 aa1.91□□□□□ -2.1
SRGAP2B-204ENST00000612199 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.74□□□□□ -2.13
SRGAP2B-204ENST00000612199 KRTAP5-3Q6L8H2 238 aa1.74□□□□□ -2.13
SRGAP2B-204ENST00000612199 KRTAP5-2Q701N4 177 aa1.73□□□□□ -2.13
SRGAP2B-204ENST00000612199 MUC5BQ9HC84 5762 aaPredicted RBP1.64□□□□□ -2.15
SRGAP2B-204ENST00000612199 KRTAP5-8O75690 187 aa1.63□□□□□ -2.15
SRGAP2B-204ENST00000612199 KRTAP5-10Q6L8G5 202 aa1.57□□□□□ -2.16
SRGAP2B-204ENST00000612199 AHNAKQ09666 5890 aaKnown RBP1.52□□□□□ -2.17
SRGAP2B-204ENST00000612199 KRTAP5-11Q6L8G4 156 aa1.42□□□□□ -2.18
SRGAP2B-204ENST00000612199 KRTAP5-1Q6L8H4 278 aa1.42□□□□□ -2.18
SRGAP2B-204ENST00000612199 KRTAP21-2Q3LI59 83 aa1.36□□□□□ -2.19
SRGAP2B-204ENST00000612199 KRTAP21-1Q3LI58 79 aa1.22□□□□□ -2.21
SRGAP2B-204ENST00000612199 KRTAP5-7Q6L8G8 165 aa1.19□□□□□ -2.22
SRGAP2B-204ENST00000612199 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 26.2 ms