RNA–Protein interactions for RNA: ENST00000572221.5

EDC4-204, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 2

Gene EDC4, Length 5,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-204ENST00000572221 LPAP08519 4548 aa6.37□□□□□ -1.39
EDC4-204ENST00000572221 KRTAP9-2Q9BYQ4 174 aa6.36□□□□□ -1.39
EDC4-204ENST00000572221 LCE2AQ5TA79 106 aaPredicted RBP6.28□□□□□ -1.4
EDC4-204ENST00000572221 MT4P47944 62 aa6.24□□□□□ -1.41
EDC4-204ENST00000572221 TNXBP22105 4242 aa6.2□□□□□ -1.42
EDC4-204ENST00000572221 KRTAP19-7Q3SYF9 63 aa6.18□□□□□ -1.42
EDC4-204ENST00000572221 LOC100996750A0A140TA64 210 aa6.18□□□□□ -1.42
EDC4-204ENST00000572221 KRTAP4-3Q9BYR4 195 aa6.15□□□□□ -1.42
EDC4-204ENST00000572221 RNF213Q63HN8 5207 aa6.13□□□□□ -1.43
EDC4-204ENST00000572221 MT1AP04731 61 aa6.12□□□□□ -1.43
EDC4-204ENST00000572221 UBR4Q5T4S7 5183 aa6.1□□□□□ -1.43
EDC4-204ENST00000572221 PRM1P04553 51 aa6.08□□□□□ -1.44
EDC4-204ENST00000572221 FAT4Q6V0I7 4981 aa6.06□□□□□ -1.44
EDC4-204ENST00000572221 KRTAP9-6A0A140TA67 174 aa6.02□□□□□ -1.45
EDC4-204ENST00000572221 LCE1BQ5T7P3 118 aa6.01□□□□□ -1.45
EDC4-204ENST00000572221 LCE1DQ5T752 114 aa6.01□□□□□ -1.45
EDC4-204ENST00000572221 LCE1AQ5T7P2 110 aa5.94□□□□□ -1.46
EDC4-204ENST00000572221 HMCN2Q8NDA2 5059 aa5.92□□□□□ -1.46
EDC4-204ENST00000572221 KRTAP2-3P0C7H8 128 aa5.91□□□□□ -1.46
EDC4-204ENST00000572221 KRTAP2-4Q9BYR9 128 aa5.91□□□□□ -1.46
EDC4-204ENST00000572221 KRTAP2-1Q9BYU5 128 aa5.91□□□□□ -1.46
EDC4-204ENST00000572221 FSIP2Q5CZC0 6907 aa5.87□□□□□ -1.47
EDC4-204ENST00000572221 MUC2Q02817 5179 aa5.8□□□□□ -1.48
EDC4-204ENST00000572221 KRTAP6-3Q3LI67 103 aa5.8□□□□□ -1.48
EDC4-204ENST00000572221 KRTAP20-1Q3LI63 56 aa5.78□□□□□ -1.48
EDC4-204ENST00000572221 KRTAP9-7A8MTY7 169 aa5.72□□□□□ -1.49
EDC4-204ENST00000572221 OBSCNQ5VST9 7968 aa5.71□□□□□ -1.49
EDC4-204ENST00000572221 KRTAP4-9Q9BYQ8 210 aa5.71□□□□□ -1.5
EDC4-204ENST00000572221 LCE5AQ5TCM9 118 aa5.67□□□□□ -1.5
EDC4-204ENST00000572221 KRTAP6-1Q3LI64 71 aa5.61□□□□□ -1.51
EDC4-204ENST00000572221 SYNE2Q8WXH0 6885 aaKnown RBP5.61□□□□□ -1.51
EDC4-204ENST00000572221 LCE4AQ5TA78 99 aa5.61□□□□□ -1.51
EDC4-204ENST00000572221 KRTAP9-4Q9BYQ2 154 aa5.59□□□□□ -1.51
EDC4-204ENST00000572221 KRTAP6-2Q3LI66 62 aa5.56□□□□□ -1.52
EDC4-204ENST00000572221 KRTAP9-6A8MVA2 160 aa5.55□□□□□ -1.52
EDC4-204ENST00000572221 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.53□□□□□ -1.52
EDC4-204ENST00000572221 KRTAP2-2Q9BYT5 123 aa5.48□□□□□ -1.53
EDC4-204ENST00000572221 USH2AO75445 5202 aa5.19□□□□□ -1.58
EDC4-204ENST00000572221 LCE1CQ5T751 118 aa5.1□□□□□ -1.59
EDC4-204ENST00000572221 LCE1EQ5T753 118 aa5.1□□□□□ -1.59
EDC4-204ENST00000572221 LCE1FQ5T754 118 aa5.1□□□□□ -1.59
EDC4-204ENST00000572221 FCGBPQ9Y6R7 5405 aaPredicted RBP5.08□□□□□ -1.6
EDC4-204ENST00000572221 DSTQ03001 7570 aaKnown RBP5□□□□□ -1.61
EDC4-204ENST00000572221 MACF1Q9UPN3 7388 aaKnown RBP4.97□□□□□ -1.61
EDC4-204ENST00000572221 KRTAP5-9P26371 169 aa4.94□□□□□ -1.62
EDC4-204ENST00000572221 KRTAP9-9Q9BYP9 154 aa4.84□□□□□ -1.64
EDC4-204ENST00000572221 NEBP20929 6669 aa4.76□□□□□ -1.65
EDC4-204ENST00000572221 KMT2DO14686 5537 aa4.74□□□□□ -1.65
EDC4-204ENST00000572221 KRTAP20-2Q3LI61 65 aa4.65□□□□□ -1.67
EDC4-204ENST00000572221 SSPOA2VEC9 5147 aa4.64□□□□□ -1.67
EDC4-204ENST00000572221 KRTAP4-6Q9BYQ5 205 aa4.62□□□□□ -1.67
EDC4-204ENST00000572221 MUC19Q7Z5P9 8384 aa4.59□□□□□ -1.67
EDC4-204ENST00000572221 GPR98Q8WXG9 6306 aa4.56□□□□□ -1.68
EDC4-204ENST00000572221 MDN1Q9NU22 5596 aa4.56□□□□□ -1.68
EDC4-204ENST00000572221 KRTAP4-11Q9BYQ6 195 aa4.44□□□□□ -1.7
EDC4-204ENST00000572221 MUC12Q9UKN1 5478 aa4.42□□□□□ -1.7
EDC4-204ENST00000572221 KRTAP5-4Q6L8H1 288 aa4.34□□□□□ -1.71
EDC4-204ENST00000572221 KRTAP5-5Q701N2 237 aaPredicted RBP4.1□□□□□ -1.75
EDC4-204ENST00000572221 KRTAP4-4Q9BYR3 166 aa4.09□□□□□ -1.75
EDC4-204ENST00000572221 KRTAP4-12Q9BQ66 201 aa4.07□□□□□ -1.76
EDC4-204ENST00000572221 KRTAP4-2Q9BYR5 136 aa4.07□□□□□ -1.76
EDC4-204ENST00000572221 KRTAP5-3Q6L8H2 238 aa3.81□□□□□ -1.8
EDC4-204ENST00000572221 MUC5ACP98088 5654 aa3.77□□□□□ -1.81
EDC4-204ENST00000572221 AHNAK2Q8IVF2 5795 aa3.69□□□□□ -1.82
EDC4-204ENST00000572221 HMCN1Q96RW7 5635 aa3.65□□□□□ -1.82
EDC4-204ENST00000572221 KRTAP5-8O75690 187 aa3.43□□□□□ -1.86
EDC4-204ENST00000572221 KRTAP5-2Q701N4 177 aa3.39□□□□□ -1.87
EDC4-204ENST00000572221 KRTAP5-10Q6L8G5 202 aa3.36□□□□□ -1.87
EDC4-204ENST00000572221 MUC5BQ9HC84 5762 aaPredicted RBP3.15□□□□□ -1.91
EDC4-204ENST00000572221 KRTAP5-11Q6L8G4 156 aa3.12□□□□□ -1.91
EDC4-204ENST00000572221 PHGR1C9JFL3 82 aa3.09□□□□□ -1.91
EDC4-204ENST00000572221 AHNAKQ09666 5890 aaKnown RBP3.04□□□□□ -1.92
EDC4-204ENST00000572221 KRTAP5-1Q6L8H4 278 aa2.96□□□□□ -1.94
EDC4-204ENST00000572221 KRTAP21-2Q3LI59 83 aa2.86□□□□□ -1.95
EDC4-204ENST00000572221 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.75□□□□□ -1.97
EDC4-204ENST00000572221 KRTAP21-1Q3LI58 79 aa2.58□□□□□ -2
EDC4-204ENST00000572221 KRTAP5-7Q6L8G8 165 aa2.45□□□□□ -2.02
EDC4-204ENST00000572221 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 13.5 ms