RNA–Protein interactions for RNA: ENST00000479446.5

ABCA2-217, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 6,295 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-217ENST00000479446 TNXBP22105 4242 aa6.01□□□□□ -1.45
ABCA2-217ENST00000479446 MT3P25713 68 aa6.01□□□□□ -1.45
ABCA2-217ENST00000479446 MT4P47944 62 aa6.01□□□□□ -1.45
ABCA2-217ENST00000479446 LOC100996750A0A140TA64 210 aa5.97□□□□□ -1.45
ABCA2-217ENST00000479446 KRTAP4-3Q9BYR4 195 aa5.91□□□□□ -1.46
ABCA2-217ENST00000479446 PRM1P04553 51 aa5.91□□□□□ -1.46
ABCA2-217ENST00000479446 KRTAP19-7Q3SYF9 63 aa5.88□□□□□ -1.47
ABCA2-217ENST00000479446 UBR4Q5T4S7 5183 aa5.82□□□□□ -1.48
ABCA2-217ENST00000479446 RNF213Q63HN8 5207 aa5.81□□□□□ -1.48
ABCA2-217ENST00000479446 FAT4Q6V0I7 4981 aa5.77□□□□□ -1.49
ABCA2-217ENST00000479446 LCE1BQ5T7P3 118 aa5.77□□□□□ -1.49
ABCA2-217ENST00000479446 MT1AP04731 61 aa5.73□□□□□ -1.49
ABCA2-217ENST00000479446 KRTAP2-3P0C7H8 128 aa5.73□□□□□ -1.49
ABCA2-217ENST00000479446 KRTAP2-4Q9BYR9 128 aa5.73□□□□□ -1.49
ABCA2-217ENST00000479446 KRTAP2-1Q9BYU5 128 aa5.73□□□□□ -1.49
ABCA2-217ENST00000479446 LCE2AQ5TA79 106 aaPredicted RBP5.72□□□□□ -1.49
ABCA2-217ENST00000479446 HMCN2Q8NDA2 5059 aa5.71□□□□□ -1.49
ABCA2-217ENST00000479446 LCE1DQ5T752 114 aa5.68□□□□□ -1.5
ABCA2-217ENST00000479446 KRTAP9-2Q9BYQ4 174 aa5.66□□□□□ -1.5
ABCA2-217ENST00000479446 FSIP2Q5CZC0 6907 aa5.62□□□□□ -1.51
ABCA2-217ENST00000479446 KRTAP4-9Q9BYQ8 210 aa5.57□□□□□ -1.52
ABCA2-217ENST00000479446 MUC2Q02817 5179 aa5.53□□□□□ -1.52
ABCA2-217ENST00000479446 LCE5AQ5TCM9 118 aa5.45□□□□□ -1.54
ABCA2-217ENST00000479446 KRTAP9-6A8MVA2 160 aa5.45□□□□□ -1.54
ABCA2-217ENST00000479446 OBSCNQ5VST9 7968 aa5.45□□□□□ -1.54
ABCA2-217ENST00000479446 KRTAP9-6A0A140TA67 174 aa5.44□□□□□ -1.54
ABCA2-217ENST00000479446 KRTAP20-1Q3LI63 56 aa5.38□□□□□ -1.55
ABCA2-217ENST00000479446 LCE1AQ5T7P2 110 aa5.36□□□□□ -1.55
ABCA2-217ENST00000479446 KRTAP6-1Q3LI64 71 aa5.35□□□□□ -1.55
ABCA2-217ENST00000479446 SYNE2Q8WXH0 6885 aaKnown RBP5.27□□□□□ -1.57
ABCA2-217ENST00000479446 KRTAP6-2Q3LI66 62 aa5.25□□□□□ -1.57
ABCA2-217ENST00000479446 KRTAP9-4Q9BYQ2 154 aa5.24□□□□□ -1.57
ABCA2-217ENST00000479446 KRTAP6-3Q3LI67 103 aa5.17□□□□□ -1.58
ABCA2-217ENST00000479446 KRTAP9-7A8MTY7 169 aa5.16□□□□□ -1.58
ABCA2-217ENST00000479446 LCE1CQ5T751 118 aa5.14□□□□□ -1.59
ABCA2-217ENST00000479446 LCE1EQ5T753 118 aa5.14□□□□□ -1.59
ABCA2-217ENST00000479446 LCE1FQ5T754 118 aa5.14□□□□□ -1.59
ABCA2-217ENST00000479446 LCE4AQ5TA78 99 aa5.05□□□□□ -1.6
ABCA2-217ENST00000479446 USH2AO75445 5202 aa5.03□□□□□ -1.6
ABCA2-217ENST00000479446 FCGBPQ9Y6R7 5405 aaPredicted RBP5.01□□□□□ -1.61
ABCA2-217ENST00000479446 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.92□□□□□ -1.62
ABCA2-217ENST00000479446 KRTAP2-2Q9BYT5 123 aa4.87□□□□□ -1.63
ABCA2-217ENST00000479446 DSTQ03001 7570 aaKnown RBP4.79□□□□□ -1.64
ABCA2-217ENST00000479446 KMT2DO14686 5537 aa4.61□□□□□ -1.67
ABCA2-217ENST00000479446 MACF1Q9UPN3 7388 aaKnown RBP4.58□□□□□ -1.68
ABCA2-217ENST00000479446 KRTAP9-9Q9BYP9 154 aa4.52□□□□□ -1.69
ABCA2-217ENST00000479446 KRTAP5-9P26371 169 aa4.48□□□□□ -1.69
ABCA2-217ENST00000479446 SSPOA2VEC9 5147 aa4.46□□□□□ -1.7
ABCA2-217ENST00000479446 MUC19Q7Z5P9 8384 aa4.4□□□□□ -1.7
ABCA2-217ENST00000479446 MUC12Q9UKN1 5478 aa4.36□□□□□ -1.71
ABCA2-217ENST00000479446 NEBP20929 6669 aa4.35□□□□□ -1.71
ABCA2-217ENST00000479446 KRTAP4-11Q9BYQ6 195 aa4.34□□□□□ -1.71
ABCA2-217ENST00000479446 KRTAP4-6Q9BYQ5 205 aa4.31□□□□□ -1.72
ABCA2-217ENST00000479446 MDN1Q9NU22 5596 aa4.29□□□□□ -1.72
ABCA2-217ENST00000479446 KRTAP20-2Q3LI61 65 aa4.28□□□□□ -1.72
ABCA2-217ENST00000479446 KRTAP4-4Q9BYR3 166 aa4.07□□□□□ -1.76
ABCA2-217ENST00000479446 KRTAP5-5Q701N2 237 aaPredicted RBP4.06□□□□□ -1.76
ABCA2-217ENST00000479446 KRTAP4-12Q9BQ66 201 aa4.01□□□□□ -1.77
ABCA2-217ENST00000479446 KRTAP4-2Q9BYR5 136 aa4.01□□□□□ -1.77
ABCA2-217ENST00000479446 KRTAP5-4Q6L8H1 288 aa3.93□□□□□ -1.78
ABCA2-217ENST00000479446 GPR98Q8WXG9 6306 aa3.93□□□□□ -1.78
ABCA2-217ENST00000479446 MUC5ACP98088 5654 aa3.63□□□□□ -1.83
ABCA2-217ENST00000479446 HMCN1Q96RW7 5635 aa3.5□□□□□ -1.85
ABCA2-217ENST00000479446 KRTAP5-3Q6L8H2 238 aa3.44□□□□□ -1.86
ABCA2-217ENST00000479446 AHNAK2Q8IVF2 5795 aa3.35□□□□□ -1.87
ABCA2-217ENST00000479446 KRTAP5-10Q6L8G5 202 aa3.25□□□□□ -1.89
ABCA2-217ENST00000479446 KRTAP5-2Q701N4 177 aa3.14□□□□□ -1.91
ABCA2-217ENST00000479446 KRTAP5-8O75690 187 aa3.12□□□□□ -1.91
ABCA2-217ENST00000479446 PHGR1C9JFL3 82 aa3.08□□□□□ -1.92
ABCA2-217ENST00000479446 MUC5BQ9HC84 5762 aaPredicted RBP2.96□□□□□ -1.94
ABCA2-217ENST00000479446 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
ABCA2-217ENST00000479446 KRTAP5-1Q6L8H4 278 aa2.83□□□□□ -1.96
ABCA2-217ENST00000479446 AHNAKQ09666 5890 aaKnown RBP2.82□□□□□ -1.96
ABCA2-217ENST00000479446 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
ABCA2-217ENST00000479446 KRTAP21-1Q3LI58 79 aa2.57□□□□□ -2
ABCA2-217ENST00000479446 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.54□□□□□ -2
ABCA2-217ENST00000479446 KRTAP5-7Q6L8G8 165 aa2.17□□□□□ -2.06
ABCA2-217ENST00000479446 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 10.5 ms