RNA–Protein interactions for RNA: ENST00000479155.1

LLGL1-202, Transcript of LLGL1, scribble cell polarity complex component, humanhuman

TSL 1 (best)

Gene LLGL1, Length 6,004 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LLGL1-202ENST00000479155 FLGP20930 4061 aaPredicted RBP4.48□□□□□ -1.69
LLGL1-202ENST00000479155 LCE1DQ5T752 114 aa4.45□□□□□ -1.7
LLGL1-202ENST00000479155 KRTAP19-6Q3LI70 58 aa4.45□□□□□ -1.7
LLGL1-202ENST00000479155 LOC100996750A0A140TA64 210 aa4.43□□□□□ -1.7
LLGL1-202ENST00000479155 KRTAP9-2Q9BYQ4 174 aa4.4□□□□□ -1.7
LLGL1-202ENST00000479155 ABCA13Q86UQ4 5058 aa4.4□□□□□ -1.7
LLGL1-202ENST00000479155 PRM1P04553 51 aa4.39□□□□□ -1.71
LLGL1-202ENST00000479155 KRTAP4-3Q9BYR4 195 aa4.37□□□□□ -1.71
LLGL1-202ENST00000479155 LCE5AQ5TCM9 118 aa4.24□□□□□ -1.73
LLGL1-202ENST00000479155 MT1AP04731 61 aa4.2□□□□□ -1.74
LLGL1-202ENST00000479155 KRTAP19-7Q3SYF9 63 aa4.18□□□□□ -1.74
LLGL1-202ENST00000479155 KRTAP9-6A0A140TA67 174 aa4.18□□□□□ -1.74
LLGL1-202ENST00000479155 LCE2AQ5TA79 106 aaPredicted RBP4.14□□□□□ -1.75
LLGL1-202ENST00000479155 KRTAP4-9Q9BYQ8 210 aa4.14□□□□□ -1.75
LLGL1-202ENST00000479155 KRTAP20-1Q3LI63 56 aa4.12□□□□□ -1.75
LLGL1-202ENST00000479155 KRTAP2-3P0C7H8 128 aa4.11□□□□□ -1.75
LLGL1-202ENST00000479155 KRTAP2-4Q9BYR9 128 aa4.11□□□□□ -1.75
LLGL1-202ENST00000479155 KRTAP2-1Q9BYU5 128 aa4.11□□□□□ -1.75
LLGL1-202ENST00000479155 FSIP2Q5CZC0 6907 aa4.1□□□□□ -1.75
LLGL1-202ENST00000479155 FAT4Q6V0I7 4981 aa4.1□□□□□ -1.75
LLGL1-202ENST00000479155 RNF213Q63HN8 5207 aa4.08□□□□□ -1.76
LLGL1-202ENST00000479155 HMCN2Q8NDA2 5059 aa4.08□□□□□ -1.76
LLGL1-202ENST00000479155 UBR4Q5T4S7 5183 aa4.06□□□□□ -1.76
LLGL1-202ENST00000479155 SYNE2Q8WXH0 6885 aaKnown RBP4.03□□□□□ -1.77
LLGL1-202ENST00000479155 SYNE1Q8NF91 8797 aaKnown RBP3.98□□□□□ -1.77
LLGL1-202ENST00000479155 LCE1CQ5T751 118 aa3.97□□□□□ -1.77
LLGL1-202ENST00000479155 LCE1EQ5T753 118 aa3.97□□□□□ -1.77
LLGL1-202ENST00000479155 LCE1FQ5T754 118 aa3.97□□□□□ -1.77
LLGL1-202ENST00000479155 LCE1AQ5T7P2 110 aa3.97□□□□□ -1.77
LLGL1-202ENST00000479155 KRTAP9-7A8MTY7 169 aa3.96□□□□□ -1.77
LLGL1-202ENST00000479155 KRTAP6-1Q3LI64 71 aa3.93□□□□□ -1.78
LLGL1-202ENST00000479155 KRTAP6-3Q3LI67 103 aa3.93□□□□□ -1.78
LLGL1-202ENST00000479155 KRTAP6-2Q3LI66 62 aa3.92□□□□□ -1.78
LLGL1-202ENST00000479155 KRTAP9-4Q9BYQ2 154 aa3.9□□□□□ -1.79
LLGL1-202ENST00000479155 MUC2Q02817 5179 aa3.86□□□□□ -1.79
LLGL1-202ENST00000479155 LCE4AQ5TA78 99 aa3.85□□□□□ -1.79
LLGL1-202ENST00000479155 KRTAP9-6A8MVA2 160 aa3.8□□□□□ -1.8
LLGL1-202ENST00000479155 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.79□□□□□ -1.8
LLGL1-202ENST00000479155 KRTAP2-2Q9BYT5 123 aa3.74□□□□□ -1.81
LLGL1-202ENST00000479155 OBSCNQ5VST9 7968 aa3.63□□□□□ -1.83
LLGL1-202ENST00000479155 FCGBPQ9Y6R7 5405 aaPredicted RBP3.5□□□□□ -1.85
LLGL1-202ENST00000479155 KRTAP9-9Q9BYP9 154 aa3.48□□□□□ -1.85
LLGL1-202ENST00000479155 USH2AO75445 5202 aa3.47□□□□□ -1.85
LLGL1-202ENST00000479155 KMT2DO14686 5537 aa3.45□□□□□ -1.86
LLGL1-202ENST00000479155 DSTQ03001 7570 aaKnown RBP3.35□□□□□ -1.87
LLGL1-202ENST00000479155 KRTAP4-11Q9BYQ6 195 aa3.26□□□□□ -1.89
LLGL1-202ENST00000479155 KRTAP5-9P26371 169 aa3.24□□□□□ -1.89
LLGL1-202ENST00000479155 KRTAP20-2Q3LI61 65 aa3.22□□□□□ -1.89
LLGL1-202ENST00000479155 KRTAP4-6Q9BYQ5 205 aa3.22□□□□□ -1.89
LLGL1-202ENST00000479155 MACF1Q9UPN3 7388 aaKnown RBP3.21□□□□□ -1.9
LLGL1-202ENST00000479155 NEBP20929 6669 aa3.2□□□□□ -1.9
LLGL1-202ENST00000479155 SSPOA2VEC9 5147 aa3.2□□□□□ -1.9
LLGL1-202ENST00000479155 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
LLGL1-202ENST00000479155 MUC12Q9UKN1 5478 aa3.14□□□□□ -1.91
LLGL1-202ENST00000479155 KRTAP4-12Q9BQ66 201 aa3.13□□□□□ -1.91
LLGL1-202ENST00000479155 KRTAP4-2Q9BYR5 136 aa3.13□□□□□ -1.91
LLGL1-202ENST00000479155 KRTAP5-4Q6L8H1 288 aa2.96□□□□□ -1.94
LLGL1-202ENST00000479155 MDN1Q9NU22 5596 aa2.92□□□□□ -1.94
LLGL1-202ENST00000479155 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.94
LLGL1-202ENST00000479155 KRTAP5-5Q701N2 237 aaPredicted RBP2.85□□□□□ -1.95
LLGL1-202ENST00000479155 GPR98Q8WXG9 6306 aa2.75□□□□□ -1.97
LLGL1-202ENST00000479155 KRTAP5-3Q6L8H2 238 aa2.56□□□□□ -2
LLGL1-202ENST00000479155 MUC5ACP98088 5654 aa2.49□□□□□ -2.01
LLGL1-202ENST00000479155 KRTAP5-2Q701N4 177 aa2.35□□□□□ -2.03
LLGL1-202ENST00000479155 PHGR1C9JFL3 82 aa2.35□□□□□ -2.03
LLGL1-202ENST00000479155 KRTAP5-8O75690 187 aa2.34□□□□□ -2.03
LLGL1-202ENST00000479155 HMCN1Q96RW7 5635 aa2.31□□□□□ -2.04
LLGL1-202ENST00000479155 KRTAP5-10Q6L8G5 202 aa2.27□□□□□ -2.05
LLGL1-202ENST00000479155 AHNAK2Q8IVF2 5795 aa2.23□□□□□ -2.05
LLGL1-202ENST00000479155 MUC5BQ9HC84 5762 aaPredicted RBP2.1□□□□□ -2.07
LLGL1-202ENST00000479155 KRTAP5-1Q6L8H4 278 aa2.04□□□□□ -2.08
LLGL1-202ENST00000479155 KRTAP5-11Q6L8G4 156 aa2.04□□□□□ -2.08
LLGL1-202ENST00000479155 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
LLGL1-202ENST00000479155 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.1
LLGL1-202ENST00000479155 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.89□□□□□ -2.11
LLGL1-202ENST00000479155 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
LLGL1-202ENST00000479155 KRTAP5-7Q6L8G8 165 aa1.76□□□□□ -2.13
LLGL1-202ENST00000479155 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 112.3 ms