RNA–Protein interactions for RNA: ENST00000479155.1

LLGL1-202, Transcript of LLGL1, scribble cell polarity complex component, humanhuman

TSL 1 (best)

Gene LLGL1, Length 6,004 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LLGL1-202ENST00000479155 DCAF8L2P0C7V8 631 aa25.06■■□□□ 1.6
LLGL1-202ENST00000479155 SUPT5HO00267 1087 aaKnown RBP23.69■■□□□ 1.38
LLGL1-202ENST00000479155 NISCHQ9Y2I1 1504 aa23.35■■□□□ 1.33
LLGL1-202ENST00000479155 SHROOM4Q9ULL8 1493 aa23.24■■□□□ 1.31
LLGL1-202ENST00000479155 EHMT2Q96KQ7 1210 aa23.14■■□□□ 1.29
LLGL1-202ENST00000479155 PELP1Q8IZL8 1130 aaKnown RBP22.84■■□□□ 1.25
LLGL1-202ENST00000479155 APLP2Q06481 763 aa22.76■■□□□ 1.23
LLGL1-202ENST00000479155 FAM9AQ8IZU1 332 aaPredicted RBP22.46■■□□□ 1.19
LLGL1-202ENST00000479155 TTBK1Q5TCY1 1321 aaPredicted RBP22.37■■□□□ 1.17
LLGL1-202ENST00000479155 RANGAP1P46060 587 aaPredicted RBP22.14■■□□□ 1.14
LLGL1-202ENST00000479155 PCGF6Q9BYE7 350 aa22.12■■□□□ 1.13
LLGL1-202ENST00000479155 ATP1B4Q9UN42 357 aaPredicted RBP22■■□□□ 1.11
LLGL1-202ENST00000479155 TRIM41Q8WV44 630 aa21.95■■□□□ 1.1
LLGL1-202ENST00000479155 ERICH6Q7L0X2 663 aa21.93■■□□□ 1.1
LLGL1-202ENST00000479155 CENPBP07199 599 aaPredicted RBP21.9■■□□□ 1.1
LLGL1-202ENST00000479155 CCER1Q8TC90 406 aaPredicted RBP21.89■■□□□ 1.09
LLGL1-202ENST00000479155 ZEB1P37275 1124 aaPredicted RBP21.87■■□□□ 1.09
LLGL1-202ENST00000479155 UBTFP17480 764 aaKnown RBP21.78■■□□□ 1.08
LLGL1-202ENST00000479155 NEFLP07196 543 aa21.55■■□□□ 1.04
LLGL1-202ENST00000479155 YTHDC1Q96MU7 727 aaKnown RBP21.48■■□□□ 1.03
LLGL1-202ENST00000479155 PPARGC1BQ86YN6 1023 aaKnown RBP21.36■■□□□ 1.01
LLGL1-202ENST00000479155 MYT1LQ9UL68 1186 aa21.26■□□□□ 0.99
LLGL1-202ENST00000479155 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.2■□□□□ 0.98
LLGL1-202ENST00000479155 HNRNPUL2Q1KMD3 747 aaKnown RBP21.2■□□□□ 0.98
LLGL1-202ENST00000479155 TRIM26Q12899 539 aaPredicted RBP21.16■□□□□ 0.98
LLGL1-202ENST00000479155 ITGAEP38570 1179 aa21.16■□□□□ 0.98
LLGL1-202ENST00000479155 POLR3GLQ9BT43 218 aa21.14■□□□□ 0.97
LLGL1-202ENST00000479155 DAXXQ9UER7 740 aaPredicted RBP21.02■□□□□ 0.96
LLGL1-202ENST00000479155 MYT1Q01538 1121 aa20.97■□□□□ 0.95
LLGL1-202ENST00000479155 CHIC1Q5VXU3 224 aa20.97■□□□□ 0.95
LLGL1-202ENST00000479155 CNGB1Q14028 1251 aaPredicted RBP20.9■□□□□ 0.94
LLGL1-202ENST00000479155 HRCP23327 699 aa20.88■□□□□ 0.93
LLGL1-202ENST00000479155 LOC105371045A0A1W2PR82 267 aa20.84■□□□□ 0.93
LLGL1-202ENST00000479155 SLC4A1APQ9BWU0 796 aaKnown RBP20.81■□□□□ 0.92
LLGL1-202ENST00000479155 FAM50AQ14320 339 aaKnown RBP20.61■□□□□ 0.89
LLGL1-202ENST00000479155 CLSPNQ9HAW4 1339 aa20.55■□□□□ 0.88
LLGL1-202ENST00000479155 TRIM52Q96A61 297 aa20.54■□□□□ 0.88
LLGL1-202ENST00000479155 ZNF316A6NFI3 1004 aaPredicted RBP20.53■□□□□ 0.88
LLGL1-202ENST00000479155 DIEXFQ68CQ4 756 aaKnown RBP20.48■□□□□ 0.87
LLGL1-202ENST00000479155 RTL5Q5HYW3 569 aaPredicted RBP20.44■□□□□ 0.86
LLGL1-202ENST00000479155 PABPN1Q86U42 306 aaKnown RBP eCLIP20.42■□□□□ 0.86
LLGL1-202ENST00000479155 NEUROD1Q13562 356 aa20.42■□□□□ 0.86
LLGL1-202ENST00000479155 ABCC9O60706 1549 aa20.36■□□□□ 0.85
LLGL1-202ENST00000479155 ZNF326Q5BKZ1 582 aaKnown RBP20.32■□□□□ 0.84
LLGL1-202ENST00000479155 FBLN2P98095 1184 aa20.27■□□□□ 0.83
LLGL1-202ENST00000479155 ANP32CO43423 234 aa20.24■□□□□ 0.83
LLGL1-202ENST00000479155 ZBTB47Q9UFB7 747 aaPredicted RBP20.21■□□□□ 0.83
LLGL1-202ENST00000479155 BCANQ96GW7 911 aa20.19■□□□□ 0.82
LLGL1-202ENST00000479155 BCL11AQ9H165 835 aa20.14■□□□□ 0.81
LLGL1-202ENST00000479155 SLC24A1O60721 1099 aa20.14■□□□□ 0.81
LLGL1-202ENST00000479155 CANXP27824 592 aaKnown RBP20.1■□□□□ 0.81
LLGL1-202ENST00000479155 CDK11AQ9UQ88 783 aaPredicted RBP20.08■□□□□ 0.81
LLGL1-202ENST00000479155 ARID3CA6NKF2 412 aa20.05■□□□□ 0.8
LLGL1-202ENST00000479155 NEFMP07197 916 aa20.03■□□□□ 0.8
LLGL1-202ENST00000479155 P3H3Q8IVL6 736 aa20.03■□□□□ 0.8
LLGL1-202ENST00000479155 GTF3C3Q9Y5Q9 886 aa20.01■□□□□ 0.79
LLGL1-202ENST00000479155 ZNF777Q9ULD5 760 aaPredicted RBP19.95■□□□□ 0.78
LLGL1-202ENST00000479155 CSRNP3Q8WYN3 585 aa19.87■□□□□ 0.77
LLGL1-202ENST00000479155 ESF1Q9H501 851 aaKnown RBP19.81■□□□□ 0.76
LLGL1-202ENST00000479155 ANP32AP39687 249 aaKnown RBP19.77■□□□□ 0.76
LLGL1-202ENST00000479155 PLPPR3Q6T4P5 718 aa19.77■□□□□ 0.76
LLGL1-202ENST00000479155 CHGAP10645 457 aaKnown RBP19.73■□□□□ 0.75
LLGL1-202ENST00000479155 STAG3Q9UJ98 1225 aa19.73■□□□□ 0.75
LLGL1-202ENST00000479155 NPM2Q86SE8 214 aaKnown RBP19.7■□□□□ 0.74
LLGL1-202ENST00000479155 TONSLQ96HA7 1378 aa19.7■□□□□ 0.74
LLGL1-202ENST00000479155 ACIN1Q9UKV3 1341 aaKnown RBP19.66■□□□□ 0.74
LLGL1-202ENST00000479155 SCRIBQ14160 1630 aa19.6■□□□□ 0.73
LLGL1-202ENST00000479155 NPM1P06748 294 aaKnown RBP eCLIP19.6■□□□□ 0.73
LLGL1-202ENST00000479155 HSP90AA1P07900 732 aaKnown RBP19.57■□□□□ 0.72
LLGL1-202ENST00000479155 FKBP8Q14318 412 aa19.56■□□□□ 0.72
LLGL1-202ENST00000479155 HNRNPUQ00839 825 aaKnown RBP eCLIP19.54■□□□□ 0.72
LLGL1-202ENST00000479155 FAM9BQ8IZU0 186 aa19.54■□□□□ 0.72
LLGL1-202ENST00000479155 ANP32BQ92688 251 aaKnown RBP19.53■□□□□ 0.72
LLGL1-202ENST00000479155 UPF2Q9HAU5 1272 aaKnown RBP19.53■□□□□ 0.72
LLGL1-202ENST00000479155 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.52■□□□□ 0.71
LLGL1-202ENST00000479155 CHIC2Q9UKJ5 165 aa19.5■□□□□ 0.71
LLGL1-202ENST00000479155 DDX10Q13206 875 aaKnown RBP19.49■□□□□ 0.71
LLGL1-202ENST00000479155 SALL2Q9Y467 1007 aaPredicted RBP19.48■□□□□ 0.71
LLGL1-202ENST00000479155 TMC1Q8TDI8 760 aa19.43■□□□□ 0.7
LLGL1-202ENST00000479155 WDR43Q15061 677 aaKnown RBP eCLIP19.42■□□□□ 0.7
LLGL1-202ENST00000479155 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.41■□□□□ 0.7
LLGL1-202ENST00000479155 TSPY4P0CV99 314 aa19.38■□□□□ 0.69
LLGL1-202ENST00000479155 TSPY10P0CW01 314 aa19.38■□□□□ 0.69
LLGL1-202ENST00000479155 KDM2AQ9Y2K7 1162 aa19.38■□□□□ 0.69
LLGL1-202ENST00000479155 SCAF1Q9H7N4 1312 aaKnown RBP19.36■□□□□ 0.69
LLGL1-202ENST00000479155 CCDC136Q96JN2 1154 aa19.35■□□□□ 0.69
LLGL1-202ENST00000479155 DCAF1Q9Y4B6 1507 aa19.35■□□□□ 0.69
LLGL1-202ENST00000479155 MTUS2Q5JR59 1369 aa19.34■□□□□ 0.69
LLGL1-202ENST00000479155 A0A0G2JS52 829 aa19.34■□□□□ 0.69
LLGL1-202ENST00000479155 MRS2Q9HD23 443 aa19.31■□□□□ 0.68
LLGL1-202ENST00000479155 CHMP7Q8WUX9 453 aaPredicted RBP19.3■□□□□ 0.68
LLGL1-202ENST00000479155 ZCCHC6Q5VYS8 1495 aaKnown RBP19.27■□□□□ 0.68
LLGL1-202ENST00000479155 PLEKHG5O94827 1062 aa19.27■□□□□ 0.68
LLGL1-202ENST00000479155 EIF5BO60841 1220 aaKnown RBP19.27■□□□□ 0.67
LLGL1-202ENST00000479155 MYH16Q9H6N6 1097 aa19.24■□□□□ 0.67
LLGL1-202ENST00000479155 ZBTB7CA1YPR0 619 aa19.24■□□□□ 0.67
LLGL1-202ENST00000479155 SENP3Q9H4L4 574 aaPredicted RBP19.21■□□□□ 0.67
LLGL1-202ENST00000479155 CLIP1P30622 1438 aa19.19■□□□□ 0.66
LLGL1-202ENST00000479155 NBR1Q14596 966 aa19.19■□□□□ 0.66
LLGL1-202ENST00000479155 PPP1R15AO75807 674 aaPredicted RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 184.8 ms