RNA–Protein interactions for RNA: ENST00000441123.1

BRPF3-203, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 1 (best)

Gene BRPF3, Length 5,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-203ENST00000441123 KRTAP19-7Q3SYF9 63 aa3.98□□□□□ -1.77
BRPF3-203ENST00000441123 EPPK1P58107 5090 aaKnown RBP3.98□□□□□ -1.77
BRPF3-203ENST00000441123 KRTAP2-3P0C7H8 128 aa3.94□□□□□ -1.78
BRPF3-203ENST00000441123 KRTAP2-4Q9BYR9 128 aa3.94□□□□□ -1.78
BRPF3-203ENST00000441123 KRTAP2-1Q9BYU5 128 aa3.94□□□□□ -1.78
BRPF3-203ENST00000441123 MT4P47944 62 aa3.92□□□□□ -1.78
BRPF3-203ENST00000441123 KRTAP9-2Q9BYQ4 174 aa3.91□□□□□ -1.78
BRPF3-203ENST00000441123 MT3P25713 68 aa3.9□□□□□ -1.78
BRPF3-203ENST00000441123 FAT4Q6V0I7 4981 aa3.89□□□□□ -1.79
BRPF3-203ENST00000441123 RNF213Q63HN8 5207 aa3.88□□□□□ -1.79
BRPF3-203ENST00000441123 HMCN2Q8NDA2 5059 aa3.88□□□□□ -1.79
BRPF3-203ENST00000441123 LOC100996750A0A140TA64 210 aa3.87□□□□□ -1.79
BRPF3-203ENST00000441123 KRTAP9-6A0A140TA67 174 aa3.85□□□□□ -1.79
BRPF3-203ENST00000441123 MT1AP04731 61 aa3.83□□□□□ -1.8
BRPF3-203ENST00000441123 KRTAP4-3Q9BYR4 195 aa3.82□□□□□ -1.8
BRPF3-203ENST00000441123 SYNE1Q8NF91 8797 aaKnown RBP3.79□□□□□ -1.8
BRPF3-203ENST00000441123 PRM1P04553 51 aa3.76□□□□□ -1.81
BRPF3-203ENST00000441123 LCE1BQ5T7P3 118 aa3.76□□□□□ -1.81
BRPF3-203ENST00000441123 LCE1DQ5T752 114 aa3.73□□□□□ -1.81
BRPF3-203ENST00000441123 KRTAP9-6A8MVA2 160 aa3.66□□□□□ -1.82
BRPF3-203ENST00000441123 LCE1AQ5T7P2 110 aa3.66□□□□□ -1.82
BRPF3-203ENST00000441123 FSIP2Q5CZC0 6907 aa3.64□□□□□ -1.83
BRPF3-203ENST00000441123 LCE5AQ5TCM9 118 aa3.62□□□□□ -1.83
BRPF3-203ENST00000441123 UBR4Q5T4S7 5183 aa3.62□□□□□ -1.83
BRPF3-203ENST00000441123 KRTAP20-1Q3LI63 56 aa3.59□□□□□ -1.83
BRPF3-203ENST00000441123 KRTAP6-1Q3LI64 71 aa3.54□□□□□ -1.84
BRPF3-203ENST00000441123 KRTAP9-4Q9BYQ2 154 aa3.54□□□□□ -1.84
BRPF3-203ENST00000441123 KRTAP9-7A8MTY7 169 aa3.53□□□□□ -1.84
BRPF3-203ENST00000441123 KRTAP4-9Q9BYQ8 210 aa3.53□□□□□ -1.84
BRPF3-203ENST00000441123 KRTAP6-3Q3LI67 103 aa3.52□□□□□ -1.85
BRPF3-203ENST00000441123 SYNE2Q8WXH0 6885 aaKnown RBP3.52□□□□□ -1.85
BRPF3-203ENST00000441123 MUC2Q02817 5179 aa3.51□□□□□ -1.85
BRPF3-203ENST00000441123 LCE4AQ5TA78 99 aa3.42□□□□□ -1.86
BRPF3-203ENST00000441123 KRTAP6-2Q3LI66 62 aa3.41□□□□□ -1.86
BRPF3-203ENST00000441123 OBSCNQ5VST9 7968 aa3.4□□□□□ -1.86
BRPF3-203ENST00000441123 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.37□□□□□ -1.87
BRPF3-203ENST00000441123 KRTAP2-2Q9BYT5 123 aa3.32□□□□□ -1.88
BRPF3-203ENST00000441123 GPR98Q8WXG9 6306 aa3.28□□□□□ -1.88
BRPF3-203ENST00000441123 USH2AO75445 5202 aa3.26□□□□□ -1.89
BRPF3-203ENST00000441123 LCE1CQ5T751 118 aa3.24□□□□□ -1.89
BRPF3-203ENST00000441123 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
BRPF3-203ENST00000441123 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
BRPF3-203ENST00000441123 KRTAP5-9P26371 169 aa3.19□□□□□ -1.9
BRPF3-203ENST00000441123 DSTQ03001 7570 aaKnown RBP3.04□□□□□ -1.92
BRPF3-203ENST00000441123 FCGBPQ9Y6R7 5405 aaPredicted RBP3.03□□□□□ -1.93
BRPF3-203ENST00000441123 MACF1Q9UPN3 7388 aaKnown RBP3.01□□□□□ -1.93
BRPF3-203ENST00000441123 SSPOA2VEC9 5147 aa3□□□□□ -1.93
BRPF3-203ENST00000441123 KRTAP9-9Q9BYP9 154 aa2.99□□□□□ -1.93
BRPF3-203ENST00000441123 KMT2DO14686 5537 aa2.98□□□□□ -1.93
BRPF3-203ENST00000441123 NEBP20929 6669 aa2.93□□□□□ -1.94
BRPF3-203ENST00000441123 KRTAP20-2Q3LI61 65 aa2.89□□□□□ -1.95
BRPF3-203ENST00000441123 KRTAP5-5Q701N2 237 aaPredicted RBP2.83□□□□□ -1.96
BRPF3-203ENST00000441123 KRTAP4-6Q9BYQ5 205 aa2.82□□□□□ -1.96
BRPF3-203ENST00000441123 KRTAP5-4Q6L8H1 288 aa2.78□□□□□ -1.96
BRPF3-203ENST00000441123 MUC19Q7Z5P9 8384 aa2.75□□□□□ -1.97
BRPF3-203ENST00000441123 MDN1Q9NU22 5596 aa2.73□□□□□ -1.97
BRPF3-203ENST00000441123 KRTAP4-11Q9BYQ6 195 aa2.72□□□□□ -1.97
BRPF3-203ENST00000441123 MUC12Q9UKN1 5478 aa2.71□□□□□ -1.98
BRPF3-203ENST00000441123 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -2
BRPF3-203ENST00000441123 KRTAP4-12Q9BQ66 201 aa2.58□□□□□ -2
BRPF3-203ENST00000441123 KRTAP4-2Q9BYR5 136 aa2.58□□□□□ -2
BRPF3-203ENST00000441123 KRTAP5-3Q6L8H2 238 aa2.4□□□□□ -2.03
BRPF3-203ENST00000441123 KRTAP5-2Q701N4 177 aa2.33□□□□□ -2.04
BRPF3-203ENST00000441123 AHNAK2Q8IVF2 5795 aa2.32□□□□□ -2.04
BRPF3-203ENST00000441123 MUC5ACP98088 5654 aa2.25□□□□□ -2.05
BRPF3-203ENST00000441123 KRTAP5-10Q6L8G5 202 aa2.24□□□□□ -2.05
BRPF3-203ENST00000441123 HMCN1Q96RW7 5635 aa2.2□□□□□ -2.06
BRPF3-203ENST00000441123 KRTAP5-8O75690 187 aa2.08□□□□□ -2.08
BRPF3-203ENST00000441123 AHNAKQ09666 5890 aaKnown RBP2.02□□□□□ -2.09
BRPF3-203ENST00000441123 KRTAP5-11Q6L8G4 156 aa2.02□□□□□ -2.09
BRPF3-203ENST00000441123 PHGR1C9JFL3 82 aa1.97□□□□□ -2.09
BRPF3-203ENST00000441123 KRTAP5-1Q6L8H4 278 aa1.96□□□□□ -2.1
BRPF3-203ENST00000441123 MUC5BQ9HC84 5762 aaPredicted RBP1.95□□□□□ -2.1
BRPF3-203ENST00000441123 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.93□□□□□ -2.1
BRPF3-203ENST00000441123 KRTAP21-2Q3LI59 83 aa1.93□□□□□ -2.1
BRPF3-203ENST00000441123 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
BRPF3-203ENST00000441123 KRTAP5-7Q6L8G8 165 aa1.72□□□□□ -2.13
BRPF3-203ENST00000441123 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 11.5 ms