RNA–Protein interactions for RNA: ENST00000439673.6

TSC2-207, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TSC2, Length 5,287 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-207ENST00000439673 KRTAP19-6Q3LI70 58 aa4.96□□□□□ -1.62
TSC2-207ENST00000439673 PRM1P04553 51 aa4.94□□□□□ -1.62
TSC2-207ENST00000439673 LOC100996750A0A140TA64 210 aa4.88□□□□□ -1.63
TSC2-207ENST00000439673 KRTAP9-2Q9BYQ4 174 aa4.86□□□□□ -1.63
TSC2-207ENST00000439673 KRTAP19-7Q3SYF9 63 aa4.84□□□□□ -1.64
TSC2-207ENST00000439673 KRTAP4-3Q9BYR4 195 aa4.83□□□□□ -1.64
TSC2-207ENST00000439673 HMCN2Q8NDA2 5059 aa4.82□□□□□ -1.64
TSC2-207ENST00000439673 MT4P47944 62 aa4.81□□□□□ -1.64
TSC2-207ENST00000439673 KRTAP2-3P0C7H8 128 aa4.78□□□□□ -1.64
TSC2-207ENST00000439673 KRTAP2-4Q9BYR9 128 aa4.78□□□□□ -1.64
TSC2-207ENST00000439673 KRTAP2-1Q9BYU5 128 aa4.78□□□□□ -1.64
TSC2-207ENST00000439673 MT1AP04731 61 aa4.77□□□□□ -1.65
TSC2-207ENST00000439673 LCE2AQ5TA79 106 aaPredicted RBP4.76□□□□□ -1.65
TSC2-207ENST00000439673 KRTAP9-6A0A140TA67 174 aa4.74□□□□□ -1.65
TSC2-207ENST00000439673 RNF213Q63HN8 5207 aa4.73□□□□□ -1.65
TSC2-207ENST00000439673 FAT4Q6V0I7 4981 aa4.7□□□□□ -1.66
TSC2-207ENST00000439673 UBR4Q5T4S7 5183 aa4.67□□□□□ -1.66
TSC2-207ENST00000439673 LCE1BQ5T7P3 118 aa4.67□□□□□ -1.66
TSC2-207ENST00000439673 LCE1DQ5T752 114 aa4.66□□□□□ -1.66
TSC2-207ENST00000439673 KRTAP20-1Q3LI63 56 aa4.59□□□□□ -1.67
TSC2-207ENST00000439673 KRTAP4-9Q9BYQ8 210 aa4.58□□□□□ -1.68
TSC2-207ENST00000439673 FSIP2Q5CZC0 6907 aa4.53□□□□□ -1.68
TSC2-207ENST00000439673 MUC2Q02817 5179 aa4.53□□□□□ -1.68
TSC2-207ENST00000439673 OBSCNQ5VST9 7968 aa4.51□□□□□ -1.69
TSC2-207ENST00000439673 KRTAP9-6A8MVA2 160 aa4.47□□□□□ -1.69
TSC2-207ENST00000439673 KRTAP9-7A8MTY7 169 aa4.47□□□□□ -1.69
TSC2-207ENST00000439673 LCE1AQ5T7P2 110 aa4.46□□□□□ -1.7
TSC2-207ENST00000439673 KRTAP6-1Q3LI64 71 aa4.41□□□□□ -1.7
TSC2-207ENST00000439673 LCE5AQ5TCM9 118 aa4.39□□□□□ -1.71
TSC2-207ENST00000439673 SYNE2Q8WXH0 6885 aaKnown RBP4.37□□□□□ -1.71
TSC2-207ENST00000439673 KRTAP6-2Q3LI66 62 aa4.37□□□□□ -1.71
TSC2-207ENST00000439673 KRTAP6-3Q3LI67 103 aa4.36□□□□□ -1.71
TSC2-207ENST00000439673 KRTAP9-4Q9BYQ2 154 aa4.35□□□□□ -1.71
TSC2-207ENST00000439673 LCE4AQ5TA78 99 aa4.21□□□□□ -1.74
TSC2-207ENST00000439673 KRTAP2-2Q9BYT5 123 aa4.19□□□□□ -1.74
TSC2-207ENST00000439673 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.17□□□□□ -1.74
TSC2-207ENST00000439673 LCE1CQ5T751 118 aa4.08□□□□□ -1.76
TSC2-207ENST00000439673 LCE1EQ5T753 118 aa4.08□□□□□ -1.76
TSC2-207ENST00000439673 LCE1FQ5T754 118 aa4.08□□□□□ -1.76
TSC2-207ENST00000439673 USH2AO75445 5202 aa4.04□□□□□ -1.76
TSC2-207ENST00000439673 FCGBPQ9Y6R7 5405 aaPredicted RBP4.04□□□□□ -1.76
TSC2-207ENST00000439673 DSTQ03001 7570 aaKnown RBP3.87□□□□□ -1.79
TSC2-207ENST00000439673 KRTAP9-9Q9BYP9 154 aa3.82□□□□□ -1.8
TSC2-207ENST00000439673 MACF1Q9UPN3 7388 aaKnown RBP3.8□□□□□ -1.8
TSC2-207ENST00000439673 KMT2DO14686 5537 aa3.79□□□□□ -1.8
TSC2-207ENST00000439673 GPR98Q8WXG9 6306 aa3.75□□□□□ -1.81
TSC2-207ENST00000439673 SSPOA2VEC9 5147 aa3.72□□□□□ -1.81
TSC2-207ENST00000439673 KRTAP5-9P26371 169 aa3.71□□□□□ -1.82
TSC2-207ENST00000439673 MUC19Q7Z5P9 8384 aa3.68□□□□□ -1.82
TSC2-207ENST00000439673 NEBP20929 6669 aa3.64□□□□□ -1.83
TSC2-207ENST00000439673 KRTAP4-11Q9BYQ6 195 aa3.61□□□□□ -1.83
TSC2-207ENST00000439673 MUC12Q9UKN1 5478 aa3.53□□□□□ -1.84
TSC2-207ENST00000439673 KRTAP20-2Q3LI61 65 aa3.51□□□□□ -1.85
TSC2-207ENST00000439673 KRTAP4-6Q9BYQ5 205 aa3.5□□□□□ -1.85
TSC2-207ENST00000439673 MDN1Q9NU22 5596 aa3.45□□□□□ -1.86
TSC2-207ENST00000439673 KRTAP5-5Q701N2 237 aaPredicted RBP3.35□□□□□ -1.87
TSC2-207ENST00000439673 KRTAP5-4Q6L8H1 288 aa3.24□□□□□ -1.89
TSC2-207ENST00000439673 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
TSC2-207ENST00000439673 KRTAP4-12Q9BQ66 201 aa3.12□□□□□ -1.91
TSC2-207ENST00000439673 KRTAP4-2Q9BYR5 136 aa3.12□□□□□ -1.91
TSC2-207ENST00000439673 MUC5ACP98088 5654 aa2.93□□□□□ -1.94
TSC2-207ENST00000439673 AHNAK2Q8IVF2 5795 aa2.89□□□□□ -1.95
TSC2-207ENST00000439673 HMCN1Q96RW7 5635 aa2.84□□□□□ -1.95
TSC2-207ENST00000439673 KRTAP5-3Q6L8H2 238 aa2.84□□□□□ -1.95
TSC2-207ENST00000439673 KRTAP5-10Q6L8G5 202 aa2.69□□□□□ -1.98
TSC2-207ENST00000439673 KRTAP5-2Q701N4 177 aa2.64□□□□□ -1.99
TSC2-207ENST00000439673 KRTAP5-8O75690 187 aa2.58□□□□□ -2
TSC2-207ENST00000439673 PHGR1C9JFL3 82 aa2.53□□□□□ -2
TSC2-207ENST00000439673 MUC5BQ9HC84 5762 aaPredicted RBP2.42□□□□□ -2.02
TSC2-207ENST00000439673 KRTAP5-11Q6L8G4 156 aa2.37□□□□□ -2.03
TSC2-207ENST00000439673 KRTAP5-7Q6L8G8 165 aa2.34□□□□□ -2.03
TSC2-207ENST00000439673 KRTAP5-1Q6L8H4 278 aa2.33□□□□□ -2.04
TSC2-207ENST00000439673 AHNAKQ09666 5890 aaKnown RBP2.31□□□□□ -2.04
TSC2-207ENST00000439673 KRTAP21-2Q3LI59 83 aa2.24□□□□□ -2.05
TSC2-207ENST00000439673 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.06
TSC2-207ENST00000439673 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.11□□□□□ -2.07
TSC2-207ENST00000439673 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 7 ms