RNA–Protein interactions for RNA: ENST00000428650.5

STRC-201, Transcript of stereocilin, humanhuman

TSL 5

Gene STRC, Length 5,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-201ENST00000428650 KRTAP9-2Q9BYQ4 174 aa4.33□□□□□ -1.72
STRC-201ENST00000428650 ABCA13Q86UQ4 5058 aa4.33□□□□□ -1.72
STRC-201ENST00000428650 LCE2AQ5TA79 106 aaPredicted RBP4.33□□□□□ -1.72
STRC-201ENST00000428650 KRTAP2-3P0C7H8 128 aa4.31□□□□□ -1.72
STRC-201ENST00000428650 KRTAP2-4Q9BYR9 128 aa4.31□□□□□ -1.72
STRC-201ENST00000428650 KRTAP2-1Q9BYU5 128 aa4.31□□□□□ -1.72
STRC-201ENST00000428650 MT1AP04731 61 aa4.29□□□□□ -1.72
STRC-201ENST00000428650 PRM1P04553 51 aa4.28□□□□□ -1.72
STRC-201ENST00000428650 KRTAP19-7Q3SYF9 63 aa4.27□□□□□ -1.73
STRC-201ENST00000428650 LOC100996750A0A140TA64 210 aa4.17□□□□□ -1.74
STRC-201ENST00000428650 MT4P47944 62 aa4.17□□□□□ -1.74
STRC-201ENST00000428650 RNF213Q63HN8 5207 aa4.17□□□□□ -1.74
STRC-201ENST00000428650 FAT4Q6V0I7 4981 aa4.13□□□□□ -1.75
STRC-201ENST00000428650 KRTAP9-6A0A140TA67 174 aa4.12□□□□□ -1.75
STRC-201ENST00000428650 KRTAP4-3Q9BYR4 195 aa4.11□□□□□ -1.75
STRC-201ENST00000428650 LCE1AQ5T7P2 110 aa4.11□□□□□ -1.75
STRC-201ENST00000428650 UBR4Q5T4S7 5183 aa4.06□□□□□ -1.76
STRC-201ENST00000428650 SYNE1Q8NF91 8797 aaKnown RBP4.05□□□□□ -1.76
STRC-201ENST00000428650 HMCN2Q8NDA2 5059 aa4.02□□□□□ -1.77
STRC-201ENST00000428650 KRTAP6-3Q3LI67 103 aa4□□□□□ -1.77
STRC-201ENST00000428650 LCE1DQ5T752 114 aa4□□□□□ -1.77
STRC-201ENST00000428650 LCE1BQ5T7P3 118 aa3.99□□□□□ -1.77
STRC-201ENST00000428650 KRTAP20-1Q3LI63 56 aa3.94□□□□□ -1.78
STRC-201ENST00000428650 KRTAP9-4Q9BYQ2 154 aa3.93□□□□□ -1.78
STRC-201ENST00000428650 LCE5AQ5TCM9 118 aa3.91□□□□□ -1.78
STRC-201ENST00000428650 FSIP2Q5CZC0 6907 aa3.91□□□□□ -1.78
STRC-201ENST00000428650 KRTAP9-7A8MTY7 169 aa3.89□□□□□ -1.79
STRC-201ENST00000428650 LCE4AQ5TA78 99 aa3.88□□□□□ -1.79
STRC-201ENST00000428650 KRTAP9-6A8MVA2 160 aa3.86□□□□□ -1.79
STRC-201ENST00000428650 KRTAP6-1Q3LI64 71 aa3.86□□□□□ -1.79
STRC-201ENST00000428650 KRTAP4-9Q9BYQ8 210 aa3.84□□□□□ -1.79
STRC-201ENST00000428650 MUC2Q02817 5179 aa3.82□□□□□ -1.8
STRC-201ENST00000428650 KRTAP6-2Q3LI66 62 aa3.81□□□□□ -1.8
STRC-201ENST00000428650 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.78□□□□□ -1.8
STRC-201ENST00000428650 KRTAP2-2Q9BYT5 123 aa3.75□□□□□ -1.81
STRC-201ENST00000428650 SYNE2Q8WXH0 6885 aaKnown RBP3.74□□□□□ -1.81
STRC-201ENST00000428650 OBSCNQ5VST9 7968 aa3.7□□□□□ -1.82
STRC-201ENST00000428650 KRTAP5-9P26371 169 aa3.43□□□□□ -1.86
STRC-201ENST00000428650 USH2AO75445 5202 aa3.42□□□□□ -1.86
STRC-201ENST00000428650 LCE1CQ5T751 118 aa3.38□□□□□ -1.87
STRC-201ENST00000428650 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
STRC-201ENST00000428650 LCE1FQ5T754 118 aa3.38□□□□□ -1.87
STRC-201ENST00000428650 FCGBPQ9Y6R7 5405 aaPredicted RBP3.29□□□□□ -1.88
STRC-201ENST00000428650 KRTAP9-9Q9BYP9 154 aa3.28□□□□□ -1.88
STRC-201ENST00000428650 NEBP20929 6669 aa3.23□□□□□ -1.89
STRC-201ENST00000428650 SSPOA2VEC9 5147 aa3.21□□□□□ -1.9
STRC-201ENST00000428650 DSTQ03001 7570 aaKnown RBP3.19□□□□□ -1.9
STRC-201ENST00000428650 MACF1Q9UPN3 7388 aaKnown RBP3.19□□□□□ -1.9
STRC-201ENST00000428650 KRTAP20-2Q3LI61 65 aa3.17□□□□□ -1.9
STRC-201ENST00000428650 KMT2DO14686 5537 aa3.16□□□□□ -1.9
STRC-201ENST00000428650 KRTAP4-6Q9BYQ5 205 aa3.12□□□□□ -1.91
STRC-201ENST00000428650 GPR98Q8WXG9 6306 aa3.09□□□□□ -1.91
STRC-201ENST00000428650 KRTAP4-11Q9BYQ6 195 aa3.06□□□□□ -1.92
STRC-201ENST00000428650 KRTAP5-4Q6L8H1 288 aa3.03□□□□□ -1.92
STRC-201ENST00000428650 MUC12Q9UKN1 5478 aa2.99□□□□□ -1.93
STRC-201ENST00000428650 MDN1Q9NU22 5596 aa2.98□□□□□ -1.93
STRC-201ENST00000428650 KRTAP5-5Q701N2 237 aaPredicted RBP2.96□□□□□ -1.94
STRC-201ENST00000428650 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.94
STRC-201ENST00000428650 KRTAP4-12Q9BQ66 201 aa2.69□□□□□ -1.98
STRC-201ENST00000428650 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
STRC-201ENST00000428650 KRTAP4-2Q9BYR5 136 aa2.69□□□□□ -1.98
STRC-201ENST00000428650 KRTAP5-3Q6L8H2 238 aa2.63□□□□□ -1.99
STRC-201ENST00000428650 AHNAK2Q8IVF2 5795 aa2.49□□□□□ -2.01
STRC-201ENST00000428650 MUC5ACP98088 5654 aa2.47□□□□□ -2.01
STRC-201ENST00000428650 KRTAP5-2Q701N4 177 aa2.41□□□□□ -2.02
STRC-201ENST00000428650 KRTAP5-10Q6L8G5 202 aa2.4□□□□□ -2.03
STRC-201ENST00000428650 HMCN1Q96RW7 5635 aa2.37□□□□□ -2.03
STRC-201ENST00000428650 KRTAP5-8O75690 187 aa2.33□□□□□ -2.04
STRC-201ENST00000428650 KRTAP5-11Q6L8G4 156 aa2.2□□□□□ -2.06
STRC-201ENST00000428650 MUC5BQ9HC84 5762 aaPredicted RBP2.15□□□□□ -2.06
STRC-201ENST00000428650 PHGR1C9JFL3 82 aa2.07□□□□□ -2.08
STRC-201ENST00000428650 KRTAP5-1Q6L8H4 278 aa2.06□□□□□ -2.08
STRC-201ENST00000428650 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.04□□□□□ -2.08
STRC-201ENST00000428650 AHNAKQ09666 5890 aaKnown RBP2.03□□□□□ -2.08
STRC-201ENST00000428650 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
STRC-201ENST00000428650 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
STRC-201ENST00000428650 KRTAP5-7Q6L8G8 165 aa1.82□□□□□ -2.12
STRC-201ENST00000428650 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 57.2 ms