RNA–Protein interactions for RNA: ENST00000428650.5

STRC-201, Transcript of stereocilin, humanhuman

TSL 5

Gene STRC, Length 5,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-201ENST00000428650 DCAF8L2P0C7V8 631 aa24.19■■□□□ 1.46
STRC-201ENST00000428650 NISCHQ9Y2I1 1504 aa24.01■■□□□ 1.43
STRC-201ENST00000428650 SUPT5HO00267 1087 aaKnown RBP23.26■■□□□ 1.31
STRC-201ENST00000428650 PELP1Q8IZL8 1130 aaKnown RBP22.89■■□□□ 1.25
STRC-201ENST00000428650 SHROOM4Q9ULL8 1493 aa22.73■■□□□ 1.23
STRC-201ENST00000428650 APLP2Q06481 763 aa22.47■■□□□ 1.19
STRC-201ENST00000428650 ZEB1P37275 1124 aaPredicted RBP22.27■■□□□ 1.16
STRC-201ENST00000428650 FAM9AQ8IZU1 332 aaPredicted RBP22.15■■□□□ 1.14
STRC-201ENST00000428650 EHMT2Q96KQ7 1210 aa22.02■■□□□ 1.12
STRC-201ENST00000428650 CENPBP07199 599 aaPredicted RBP22.01■■□□□ 1.11
STRC-201ENST00000428650 PCGF6Q9BYE7 350 aa21.93■■□□□ 1.1
STRC-201ENST00000428650 CCER1Q8TC90 406 aaPredicted RBP21.82■■□□□ 1.08
STRC-201ENST00000428650 TRIM41Q8WV44 630 aa21.81■■□□□ 1.08
STRC-201ENST00000428650 MYT1Q01538 1121 aa21.74■■□□□ 1.07
STRC-201ENST00000428650 ERICH6Q7L0X2 663 aa21.6■■□□□ 1.05
STRC-201ENST00000428650 UBTFP17480 764 aaKnown RBP21.44■■□□□ 1.02
STRC-201ENST00000428650 NEFLP07196 543 aa21.42■■□□□ 1.02
STRC-201ENST00000428650 TTBK1Q5TCY1 1321 aaPredicted RBP21.42■■□□□ 1.02
STRC-201ENST00000428650 TRIM26Q12899 539 aaPredicted RBP21.39■■□□□ 1.01
STRC-201ENST00000428650 ATP1B4Q9UN42 357 aaPredicted RBP21.19■□□□□ 0.98
STRC-201ENST00000428650 RANGAP1P46060 587 aaPredicted RBP21.18■□□□□ 0.98
STRC-201ENST00000428650 HRCP23327 699 aa21.18■□□□□ 0.98
STRC-201ENST00000428650 CHIC1Q5VXU3 224 aa20.97■□□□□ 0.95
STRC-201ENST00000428650 YTHDC1Q96MU7 727 aaKnown RBP20.94■□□□□ 0.94
STRC-201ENST00000428650 DAXXQ9UER7 740 aaPredicted RBP20.72■□□□□ 0.91
STRC-201ENST00000428650 PPARGC1BQ86YN6 1023 aaKnown RBP20.68■□□□□ 0.9
STRC-201ENST00000428650 LOC105371045A0A1W2PR82 267 aa20.63■□□□□ 0.89
STRC-201ENST00000428650 HNRNPUL2Q1KMD3 747 aaKnown RBP20.55■□□□□ 0.88
STRC-201ENST00000428650 ITGAEP38570 1179 aa20.52■□□□□ 0.88
STRC-201ENST00000428650 DIEXFQ68CQ4 756 aaKnown RBP20.52■□□□□ 0.87
STRC-201ENST00000428650 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.49■□□□□ 0.87
STRC-201ENST00000428650 POLR3GLQ9BT43 218 aa20.36■□□□□ 0.85
STRC-201ENST00000428650 MYT1LQ9UL68 1186 aa20.35■□□□□ 0.85
STRC-201ENST00000428650 RTL5Q5HYW3 569 aaPredicted RBP20.33■□□□□ 0.84
STRC-201ENST00000428650 ABCC9O60706 1549 aa20.27■□□□□ 0.84
STRC-201ENST00000428650 FAM50AQ14320 339 aaKnown RBP20.22■□□□□ 0.83
STRC-201ENST00000428650 ZNF316A6NFI3 1004 aaPredicted RBP20.22■□□□□ 0.83
STRC-201ENST00000428650 CLSPNQ9HAW4 1339 aa20.2■□□□□ 0.82
STRC-201ENST00000428650 ANP32CO43423 234 aa20.18■□□□□ 0.82
STRC-201ENST00000428650 TRIM52Q96A61 297 aa20.12■□□□□ 0.81
STRC-201ENST00000428650 PABPN1Q86U42 306 aaKnown RBP eCLIP20.1■□□□□ 0.81
STRC-201ENST00000428650 CDK11AQ9UQ88 783 aaPredicted RBP20.07■□□□□ 0.8
STRC-201ENST00000428650 DCAF1Q9Y4B6 1507 aa20.06■□□□□ 0.8
STRC-201ENST00000428650 CSRNP3Q8WYN3 585 aa20.02■□□□□ 0.8
STRC-201ENST00000428650 GTF3C3Q9Y5Q9 886 aa20.02■□□□□ 0.79
STRC-201ENST00000428650 NEUROD1Q13562 356 aa19.99■□□□□ 0.79
STRC-201ENST00000428650 SLC4A1APQ9BWU0 796 aaKnown RBP19.97■□□□□ 0.79
STRC-201ENST00000428650 ZCCHC6Q5VYS8 1495 aaKnown RBP19.96■□□□□ 0.79
STRC-201ENST00000428650 ACIN1Q9UKV3 1341 aaKnown RBP19.93■□□□□ 0.78
STRC-201ENST00000428650 CNGB1Q14028 1251 aaPredicted RBP19.9■□□□□ 0.78
STRC-201ENST00000428650 ZBTB47Q9UFB7 747 aaPredicted RBP19.86■□□□□ 0.77
STRC-201ENST00000428650 CCDC180Q9P1Z9 1646 aa19.85■□□□□ 0.77
STRC-201ENST00000428650 ANP32AP39687 249 aaKnown RBP19.75■□□□□ 0.75
STRC-201ENST00000428650 NEFMP07197 916 aa19.74■□□□□ 0.75
STRC-201ENST00000428650 BCANQ96GW7 911 aa19.73■□□□□ 0.75
STRC-201ENST00000428650 ZNF326Q5BKZ1 582 aaKnown RBP19.71■□□□□ 0.75
STRC-201ENST00000428650 CANXP27824 592 aaKnown RBP19.69■□□□□ 0.74
STRC-201ENST00000428650 TONSLQ96HA7 1378 aa19.68■□□□□ 0.74
STRC-201ENST00000428650 SCRIBQ14160 1630 aa19.66■□□□□ 0.74
STRC-201ENST00000428650 FBLN2P98095 1184 aa19.64■□□□□ 0.73
STRC-201ENST00000428650 EEA1Q15075 1411 aa19.63■□□□□ 0.73
STRC-201ENST00000428650 P3H3Q8IVL6 736 aa19.48■□□□□ 0.71
STRC-201ENST00000428650 UPF2Q9HAU5 1272 aaKnown RBP19.46■□□□□ 0.71
STRC-201ENST00000428650 FKBP8Q14318 412 aa19.44■□□□□ 0.7
STRC-201ENST00000428650 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.44■□□□□ 0.7
STRC-201ENST00000428650 ANP32BQ92688 251 aaKnown RBP19.44■□□□□ 0.7
STRC-201ENST00000428650 ZNF777Q9ULD5 760 aaPredicted RBP19.4■□□□□ 0.7
STRC-201ENST00000428650 HNRNPUQ00839 825 aaKnown RBP eCLIP19.4■□□□□ 0.7
STRC-201ENST00000428650 CLIP1P30622 1438 aa19.39■□□□□ 0.69
STRC-201ENST00000428650 GOLGA3Q08378 1498 aa19.39■□□□□ 0.69
STRC-201ENST00000428650 RB1CC1Q8TDY2 1594 aa19.34■□□□□ 0.69
STRC-201ENST00000428650 RSF1Q96T23 1441 aaPredicted RBP19.34■□□□□ 0.69
STRC-201ENST00000428650 DDX10Q13206 875 aaKnown RBP19.32■□□□□ 0.68
STRC-201ENST00000428650 MTUS2Q5JR59 1369 aa19.31■□□□□ 0.68
STRC-201ENST00000428650 TMC1Q8TDI8 760 aa19.29■□□□□ 0.68
STRC-201ENST00000428650 NPM2Q86SE8 214 aaKnown RBP19.26■□□□□ 0.67
STRC-201ENST00000428650 CCDC136Q96JN2 1154 aa19.26■□□□□ 0.67
STRC-201ENST00000428650 NACADO15069 1562 aa19.26■□□□□ 0.67
STRC-201ENST00000428650 HSP90AA1P07900 732 aaKnown RBP19.24■□□□□ 0.67
STRC-201ENST00000428650 TSPY4P0CV99 314 aa19.24■□□□□ 0.67
STRC-201ENST00000428650 TSPY10P0CW01 314 aa19.24■□□□□ 0.67
STRC-201ENST00000428650 FAM9BQ8IZU0 186 aa19.24■□□□□ 0.67
STRC-201ENST00000428650 ARID3CA6NKF2 412 aa19.23■□□□□ 0.67
STRC-201ENST00000428650 TNIKQ9UKE5 1360 aa19.23■□□□□ 0.67
STRC-201ENST00000428650 ESF1Q9H501 851 aaKnown RBP19.23■□□□□ 0.67
STRC-201ENST00000428650 CEP162Q5TB80 1403 aa19.23■□□□□ 0.67
STRC-201ENST00000428650 WDR43Q15061 677 aaKnown RBP eCLIP19.22■□□□□ 0.67
STRC-201ENST00000428650 NPM1P06748 294 aaKnown RBP eCLIP19.22■□□□□ 0.67
STRC-201ENST00000428650 EIF4G2P78344 907 aaKnown RBP eCLIP19.21■□□□□ 0.67
STRC-201ENST00000428650 CEP164Q9UPV0 1460 aa19.2■□□□□ 0.66
STRC-201ENST00000428650 MRS2Q9HD23 443 aa19.2■□□□□ 0.66
STRC-201ENST00000428650 SLC24A1O60721 1099 aa19.2■□□□□ 0.66
STRC-201ENST00000428650 GLIPR1L2Q4G1C9 344 aa19.19■□□□□ 0.66
STRC-201ENST00000428650 DDRGK1Q96HY6 314 aa19.16■□□□□ 0.66
STRC-201ENST00000428650 EIF5BO60841 1220 aaKnown RBP19.15■□□□□ 0.66
STRC-201ENST00000428650 ANP32EQ9BTT0 268 aa19.15■□□□□ 0.66
STRC-201ENST00000428650 WRNQ14191 1432 aaPredicted RBP eCLIP19.14■□□□□ 0.65
STRC-201ENST00000428650 STAG3Q9UJ98 1225 aa19.13■□□□□ 0.65
STRC-201ENST00000428650 MIER1Q8N108 512 aa19.11■□□□□ 0.65
STRC-201ENST00000428650 KIF27Q86VH2 1401 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms