RNA–Protein interactions for RNA: ENST00000398548.5

PRDM15-202, Transcript of PR/SET domain 15, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM15, Length 6,654 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-202ENST00000398548 EPPK1P58107 5090 aaKnown RBP3.2□□□□□ -1.9
PRDM15-202ENST00000398548 LCE1BQ5T7P3 118 aa3.19□□□□□ -1.9
PRDM15-202ENST00000398548 PRM1P04553 51 aa3.19□□□□□ -1.9
PRDM15-202ENST00000398548 KRTAP4-3Q9BYR4 195 aa3.17□□□□□ -1.9
PRDM15-202ENST00000398548 LCE1DQ5T752 114 aa3.16□□□□□ -1.9
PRDM15-202ENST00000398548 KRTAP9-2Q9BYQ4 174 aa3.15□□□□□ -1.91
PRDM15-202ENST00000398548 KRTAP19-7Q3SYF9 63 aa3.07□□□□□ -1.92
PRDM15-202ENST00000398548 ABCA13Q86UQ4 5058 aa3.06□□□□□ -1.92
PRDM15-202ENST00000398548 MT1AP04731 61 aa3.03□□□□□ -1.92
PRDM15-202ENST00000398548 LCE5AQ5TCM9 118 aa3.03□□□□□ -1.93
PRDM15-202ENST00000398548 LCE2AQ5TA79 106 aaPredicted RBP3.02□□□□□ -1.93
PRDM15-202ENST00000398548 KRTAP9-6A0A140TA67 174 aa3.01□□□□□ -1.93
PRDM15-202ENST00000398548 KRTAP20-1Q3LI63 56 aa3□□□□□ -1.93
PRDM15-202ENST00000398548 HMCN2Q8NDA2 5059 aa2.99□□□□□ -1.93
PRDM15-202ENST00000398548 KRTAP4-9Q9BYQ8 210 aa2.99□□□□□ -1.93
PRDM15-202ENST00000398548 FAT4Q6V0I7 4981 aa2.98□□□□□ -1.93
PRDM15-202ENST00000398548 KRTAP2-3P0C7H8 128 aa2.98□□□□□ -1.93
PRDM15-202ENST00000398548 KRTAP2-4Q9BYR9 128 aa2.98□□□□□ -1.93
PRDM15-202ENST00000398548 KRTAP2-1Q9BYU5 128 aa2.98□□□□□ -1.93
PRDM15-202ENST00000398548 FSIP2Q5CZC0 6907 aa2.94□□□□□ -1.94
PRDM15-202ENST00000398548 SYNE1Q8NF91 8797 aaKnown RBP2.9□□□□□ -1.95
PRDM15-202ENST00000398548 MUC2Q02817 5179 aa2.86□□□□□ -1.95
PRDM15-202ENST00000398548 RNF213Q63HN8 5207 aa2.86□□□□□ -1.95
PRDM15-202ENST00000398548 KRTAP6-1Q3LI64 71 aa2.85□□□□□ -1.95
PRDM15-202ENST00000398548 SYNE2Q8WXH0 6885 aaKnown RBP2.85□□□□□ -1.95
PRDM15-202ENST00000398548 KRTAP9-7A8MTY7 169 aa2.84□□□□□ -1.95
PRDM15-202ENST00000398548 LCE1AQ5T7P2 110 aa2.84□□□□□ -1.95
PRDM15-202ENST00000398548 UBR4Q5T4S7 5183 aa2.83□□□□□ -1.96
PRDM15-202ENST00000398548 KRTAP6-2Q3LI66 62 aa2.83□□□□□ -1.96
PRDM15-202ENST00000398548 KRTAP6-3Q3LI67 103 aa2.82□□□□□ -1.96
PRDM15-202ENST00000398548 KRTAP9-6A8MVA2 160 aa2.82□□□□□ -1.96
PRDM15-202ENST00000398548 LCE4AQ5TA78 99 aa2.82□□□□□ -1.96
PRDM15-202ENST00000398548 KRTAP9-4Q9BYQ2 154 aa2.81□□□□□ -1.96
PRDM15-202ENST00000398548 LCE1CQ5T751 118 aa2.8□□□□□ -1.96
PRDM15-202ENST00000398548 LCE1EQ5T753 118 aa2.8□□□□□ -1.96
PRDM15-202ENST00000398548 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
PRDM15-202ENST00000398548 KRTAP2-2Q9BYT5 123 aa2.73□□□□□ -1.97
PRDM15-202ENST00000398548 OBSCNQ5VST9 7968 aa2.71□□□□□ -1.97
PRDM15-202ENST00000398548 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.69□□□□□ -1.98
PRDM15-202ENST00000398548 KMT2DO14686 5537 aa2.58□□□□□ -2
PRDM15-202ENST00000398548 KRTAP9-9Q9BYP9 154 aa2.55□□□□□ -2
PRDM15-202ENST00000398548 DSTQ03001 7570 aaKnown RBP2.48□□□□□ -2.01
PRDM15-202ENST00000398548 FCGBPQ9Y6R7 5405 aaPredicted RBP2.46□□□□□ -2.02
PRDM15-202ENST00000398548 USH2AO75445 5202 aa2.41□□□□□ -2.02
PRDM15-202ENST00000398548 MACF1Q9UPN3 7388 aaKnown RBP2.39□□□□□ -2.03
PRDM15-202ENST00000398548 KRTAP5-9P26371 169 aa2.35□□□□□ -2.03
PRDM15-202ENST00000398548 KRTAP4-11Q9BYQ6 195 aa2.34□□□□□ -2.03
PRDM15-202ENST00000398548 KRTAP4-6Q9BYQ5 205 aa2.33□□□□□ -2.04
PRDM15-202ENST00000398548 SSPOA2VEC9 5147 aa2.31□□□□□ -2.04
PRDM15-202ENST00000398548 KRTAP20-2Q3LI61 65 aa2.29□□□□□ -2.04
PRDM15-202ENST00000398548 NEBP20929 6669 aa2.23□□□□□ -2.05
PRDM15-202ENST00000398548 MUC12Q9UKN1 5478 aa2.23□□□□□ -2.05
PRDM15-202ENST00000398548 KRTAP4-4Q9BYR3 166 aa2.17□□□□□ -2.06
PRDM15-202ENST00000398548 KRTAP4-12Q9BQ66 201 aa2.15□□□□□ -2.07
PRDM15-202ENST00000398548 KRTAP4-2Q9BYR5 136 aa2.15□□□□□ -2.07
PRDM15-202ENST00000398548 KRTAP5-4Q6L8H1 288 aa2.12□□□□□ -2.07
PRDM15-202ENST00000398548 KRTAP5-5Q701N2 237 aaPredicted RBP2.1□□□□□ -2.07
PRDM15-202ENST00000398548 MUC19Q7Z5P9 8384 aa2.1□□□□□ -2.07
PRDM15-202ENST00000398548 MDN1Q9NU22 5596 aa1.99□□□□□ -2.09
PRDM15-202ENST00000398548 KRTAP5-3Q6L8H2 238 aa1.83□□□□□ -2.12
PRDM15-202ENST00000398548 GPR98Q8WXG9 6306 aa1.82□□□□□ -2.12
PRDM15-202ENST00000398548 MUC5ACP98088 5654 aa1.77□□□□□ -2.13
PRDM15-202ENST00000398548 KRTAP5-8O75690 187 aa1.68□□□□□ -2.14
PRDM15-202ENST00000398548 KRTAP5-10Q6L8G5 202 aa1.68□□□□□ -2.14
PRDM15-202ENST00000398548 PHGR1C9JFL3 82 aa1.65□□□□□ -2.14
PRDM15-202ENST00000398548 KRTAP5-2Q701N4 177 aa1.61□□□□□ -2.15
PRDM15-202ENST00000398548 HMCN1Q96RW7 5635 aa1.61□□□□□ -2.15
PRDM15-202ENST00000398548 AHNAK2Q8IVF2 5795 aa1.51□□□□□ -2.17
PRDM15-202ENST00000398548 KRTAP5-1Q6L8H4 278 aa1.49□□□□□ -2.17
PRDM15-202ENST00000398548 MUC5BQ9HC84 5762 aaPredicted RBP1.48□□□□□ -2.17
PRDM15-202ENST00000398548 KRTAP5-11Q6L8G4 156 aa1.48□□□□□ -2.17
PRDM15-202ENST00000398548 KRTAP21-2Q3LI59 83 aa1.41□□□□□ -2.18
PRDM15-202ENST00000398548 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.39□□□□□ -2.19
PRDM15-202ENST00000398548 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.2
PRDM15-202ENST00000398548 AHNAKQ09666 5890 aaKnown RBP1.33□□□□□ -2.2
PRDM15-202ENST00000398548 KRTAP5-7Q6L8G8 165 aa1.15□□□□□ -2.23
PRDM15-202ENST00000398548 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 101.2 ms