RNA–Protein interactions for RNA: ENST00000396123.2

GREB1-206, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 1 (best) BASIC

Gene GREB1, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-206ENST00000396123 SYNE1Q8NF91 8797 aaKnown RBP4.09□□□□□ -1.75
GREB1-206ENST00000396123 UBR4Q5T4S7 5183 aa4.07□□□□□ -1.76
GREB1-206ENST00000396123 RNF213Q63HN8 5207 aa4.07□□□□□ -1.76
GREB1-206ENST00000396123 HMCN2Q8NDA2 5059 aa4.06□□□□□ -1.76
GREB1-206ENST00000396123 KRTAP9-2Q9BYQ4 174 aa4.04□□□□□ -1.76
GREB1-206ENST00000396123 LCE2AQ5TA79 106 aaPredicted RBP4.03□□□□□ -1.76
GREB1-206ENST00000396123 KRTAP19-7Q3SYF9 63 aa4.03□□□□□ -1.76
GREB1-206ENST00000396123 LOC100996750A0A140TA64 210 aa4.02□□□□□ -1.77
GREB1-206ENST00000396123 KRTAP4-3Q9BYR4 195 aa4.01□□□□□ -1.77
GREB1-206ENST00000396123 MT3P25713 68 aa3.99□□□□□ -1.77
GREB1-206ENST00000396123 FSIP2Q5CZC0 6907 aa3.95□□□□□ -1.78
GREB1-206ENST00000396123 MT4P47944 62 aa3.95□□□□□ -1.78
GREB1-206ENST00000396123 KRTAP2-3P0C7H8 128 aa3.87□□□□□ -1.79
GREB1-206ENST00000396123 KRTAP2-4Q9BYR9 128 aa3.87□□□□□ -1.79
GREB1-206ENST00000396123 KRTAP2-1Q9BYU5 128 aa3.87□□□□□ -1.79
GREB1-206ENST00000396123 PRM1P04553 51 aa3.85□□□□□ -1.79
GREB1-206ENST00000396123 KRTAP9-6A0A140TA67 174 aa3.84□□□□□ -1.8
GREB1-206ENST00000396123 MT1AP04731 61 aa3.83□□□□□ -1.8
GREB1-206ENST00000396123 MUC2Q02817 5179 aa3.82□□□□□ -1.8
GREB1-206ENST00000396123 LCE1BQ5T7P3 118 aa3.78□□□□□ -1.8
GREB1-206ENST00000396123 LCE1DQ5T752 114 aa3.77□□□□□ -1.81
GREB1-206ENST00000396123 KRTAP9-6A8MVA2 160 aa3.75□□□□□ -1.81
GREB1-206ENST00000396123 KRTAP4-9Q9BYQ8 210 aa3.73□□□□□ -1.81
GREB1-206ENST00000396123 LCE1AQ5T7P2 110 aa3.66□□□□□ -1.82
GREB1-206ENST00000396123 KRTAP20-1Q3LI63 56 aa3.66□□□□□ -1.82
GREB1-206ENST00000396123 KRTAP9-7A8MTY7 169 aa3.64□□□□□ -1.83
GREB1-206ENST00000396123 OBSCNQ5VST9 7968 aa3.64□□□□□ -1.83
GREB1-206ENST00000396123 SYNE2Q8WXH0 6885 aaKnown RBP3.63□□□□□ -1.83
GREB1-206ENST00000396123 LCE5AQ5TCM9 118 aa3.63□□□□□ -1.83
GREB1-206ENST00000396123 KRTAP6-3Q3LI67 103 aa3.62□□□□□ -1.83
GREB1-206ENST00000396123 KRTAP6-1Q3LI64 71 aa3.61□□□□□ -1.83
GREB1-206ENST00000396123 KRTAP9-4Q9BYQ2 154 aa3.52□□□□□ -1.85
GREB1-206ENST00000396123 KRTAP6-2Q3LI66 62 aa3.51□□□□□ -1.85
GREB1-206ENST00000396123 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.5□□□□□ -1.85
GREB1-206ENST00000396123 FCGBPQ9Y6R7 5405 aaPredicted RBP3.48□□□□□ -1.85
GREB1-206ENST00000396123 LCE4AQ5TA78 99 aa3.48□□□□□ -1.85
GREB1-206ENST00000396123 USH2AO75445 5202 aa3.47□□□□□ -1.85
GREB1-206ENST00000396123 KRTAP2-2Q9BYT5 123 aa3.44□□□□□ -1.86
GREB1-206ENST00000396123 DSTQ03001 7570 aaKnown RBP3.36□□□□□ -1.87
GREB1-206ENST00000396123 KMT2DO14686 5537 aa3.34□□□□□ -1.88
GREB1-206ENST00000396123 LCE1CQ5T751 118 aa3.22□□□□□ -1.89
GREB1-206ENST00000396123 LCE1EQ5T753 118 aa3.22□□□□□ -1.89
GREB1-206ENST00000396123 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
GREB1-206ENST00000396123 MACF1Q9UPN3 7388 aaKnown RBP3.21□□□□□ -1.9
GREB1-206ENST00000396123 SSPOA2VEC9 5147 aa3.16□□□□□ -1.9
GREB1-206ENST00000396123 KRTAP5-9P26371 169 aa3.14□□□□□ -1.91
GREB1-206ENST00000396123 MUC12Q9UKN1 5478 aa3.14□□□□□ -1.91
GREB1-206ENST00000396123 NEBP20929 6669 aa3.06□□□□□ -1.92
GREB1-206ENST00000396123 KRTAP9-9Q9BYP9 154 aa3.04□□□□□ -1.92
GREB1-206ENST00000396123 MDN1Q9NU22 5596 aa2.97□□□□□ -1.93
GREB1-206ENST00000396123 KRTAP4-6Q9BYQ5 205 aa2.96□□□□□ -1.94
GREB1-206ENST00000396123 MUC19Q7Z5P9 8384 aa2.95□□□□□ -1.94
GREB1-206ENST00000396123 GPR98Q8WXG9 6306 aa2.94□□□□□ -1.94
GREB1-206ENST00000396123 KRTAP20-2Q3LI61 65 aa2.92□□□□□ -1.94
GREB1-206ENST00000396123 KRTAP4-11Q9BYQ6 195 aa2.84□□□□□ -1.95
GREB1-206ENST00000396123 KRTAP5-5Q701N2 237 aaPredicted RBP2.79□□□□□ -1.96
GREB1-206ENST00000396123 KRTAP5-4Q6L8H1 288 aa2.7□□□□□ -1.98
GREB1-206ENST00000396123 KRTAP4-12Q9BQ66 201 aa2.59□□□□□ -1.99
GREB1-206ENST00000396123 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -1.99
GREB1-206ENST00000396123 KRTAP4-2Q9BYR5 136 aa2.59□□□□□ -1.99
GREB1-206ENST00000396123 MUC5ACP98088 5654 aa2.47□□□□□ -2.01
GREB1-206ENST00000396123 KRTAP5-3Q6L8H2 238 aa2.39□□□□□ -2.03
GREB1-206ENST00000396123 HMCN1Q96RW7 5635 aa2.37□□□□□ -2.03
GREB1-206ENST00000396123 AHNAK2Q8IVF2 5795 aa2.36□□□□□ -2.03
GREB1-206ENST00000396123 KRTAP5-2Q701N4 177 aa2.24□□□□□ -2.05
GREB1-206ENST00000396123 KRTAP5-10Q6L8G5 202 aa2.23□□□□□ -2.05
GREB1-206ENST00000396123 KRTAP5-8O75690 187 aa2.17□□□□□ -2.06
GREB1-206ENST00000396123 MUC5BQ9HC84 5762 aaPredicted RBP2□□□□□ -2.09
GREB1-206ENST00000396123 PHGR1C9JFL3 82 aa1.97□□□□□ -2.09
GREB1-206ENST00000396123 AHNAKQ09666 5890 aaKnown RBP1.97□□□□□ -2.09
GREB1-206ENST00000396123 KRTAP5-11Q6L8G4 156 aa1.97□□□□□ -2.09
GREB1-206ENST00000396123 KRTAP5-1Q6L8H4 278 aa1.95□□□□□ -2.1
GREB1-206ENST00000396123 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
GREB1-206ENST00000396123 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.81□□□□□ -2.12
GREB1-206ENST00000396123 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
GREB1-206ENST00000396123 KRTAP5-7Q6L8G8 165 aa1.65□□□□□ -2.15
GREB1-206ENST00000396123 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 121.7 ms