RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 KRTAP2-3P0C7H8 128 aa5.27□□□□□ -1.57
SIN3A-203ENST00000394949 KRTAP2-4Q9BYR9 128 aa5.27□□□□□ -1.57
SIN3A-203ENST00000394949 KRTAP2-1Q9BYU5 128 aa5.27□□□□□ -1.57
SIN3A-203ENST00000394949 UBR4Q5T4S7 5183 aa5.25□□□□□ -1.57
SIN3A-203ENST00000394949 PRM1P04553 51 aa5.25□□□□□ -1.57
SIN3A-203ENST00000394949 MT3P25713 68 aa5.25□□□□□ -1.57
SIN3A-203ENST00000394949 KRTAP9-2Q9BYQ4 174 aa5.18□□□□□ -1.58
SIN3A-203ENST00000394949 LCE2AQ5TA79 106 aaPredicted RBP5.16□□□□□ -1.58
SIN3A-203ENST00000394949 KRTAP19-7Q3SYF9 63 aa5.16□□□□□ -1.58
SIN3A-203ENST00000394949 RNF213Q63HN8 5207 aa5.14□□□□□ -1.59
SIN3A-203ENST00000394949 LOC100996750A0A140TA64 210 aa5.13□□□□□ -1.59
SIN3A-203ENST00000394949 FAT4Q6V0I7 4981 aa5.08□□□□□ -1.6
SIN3A-203ENST00000394949 MT4P47944 62 aa5.06□□□□□ -1.6
SIN3A-203ENST00000394949 KRTAP4-3Q9BYR4 195 aa5.05□□□□□ -1.6
SIN3A-203ENST00000394949 FSIP2Q5CZC0 6907 aa5.02□□□□□ -1.61
SIN3A-203ENST00000394949 MT1AP04731 61 aa5□□□□□ -1.61
SIN3A-203ENST00000394949 HMCN2Q8NDA2 5059 aa4.94□□□□□ -1.62
SIN3A-203ENST00000394949 MUC2Q02817 5179 aa4.94□□□□□ -1.62
SIN3A-203ENST00000394949 KRTAP9-6A8MVA2 160 aa4.9□□□□□ -1.62
SIN3A-203ENST00000394949 OBSCNQ5VST9 7968 aa4.9□□□□□ -1.62
SIN3A-203ENST00000394949 KRTAP9-6A0A140TA67 174 aa4.89□□□□□ -1.63
SIN3A-203ENST00000394949 LCE1BQ5T7P3 118 aa4.88□□□□□ -1.63
SIN3A-203ENST00000394949 LCE1DQ5T752 114 aa4.88□□□□□ -1.63
SIN3A-203ENST00000394949 LCE1AQ5T7P2 110 aa4.84□□□□□ -1.63
SIN3A-203ENST00000394949 KRTAP4-9Q9BYQ8 210 aa4.83□□□□□ -1.64
SIN3A-203ENST00000394949 KRTAP6-3Q3LI67 103 aa4.71□□□□□ -1.66
SIN3A-203ENST00000394949 KRTAP20-1Q3LI63 56 aa4.66□□□□□ -1.66
SIN3A-203ENST00000394949 KRTAP9-7A8MTY7 169 aa4.65□□□□□ -1.66
SIN3A-203ENST00000394949 KRTAP6-2Q3LI66 62 aa4.65□□□□□ -1.66
SIN3A-203ENST00000394949 SYNE2Q8WXH0 6885 aaKnown RBP4.65□□□□□ -1.66
SIN3A-203ENST00000394949 KRTAP6-1Q3LI64 71 aa4.64□□□□□ -1.67
SIN3A-203ENST00000394949 LCE5AQ5TCM9 118 aa4.64□□□□□ -1.67
SIN3A-203ENST00000394949 KRTAP9-4Q9BYQ2 154 aa4.56□□□□□ -1.68
SIN3A-203ENST00000394949 LCE4AQ5TA78 99 aa4.54□□□□□ -1.68
SIN3A-203ENST00000394949 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.5□□□□□ -1.69
SIN3A-203ENST00000394949 KRTAP2-2Q9BYT5 123 aa4.45□□□□□ -1.7
SIN3A-203ENST00000394949 USH2AO75445 5202 aa4.45□□□□□ -1.7
SIN3A-203ENST00000394949 FCGBPQ9Y6R7 5405 aaPredicted RBP4.42□□□□□ -1.7
SIN3A-203ENST00000394949 DSTQ03001 7570 aaKnown RBP4.35□□□□□ -1.71
SIN3A-203ENST00000394949 MACF1Q9UPN3 7388 aaKnown RBP4.28□□□□□ -1.72
SIN3A-203ENST00000394949 KMT2DO14686 5537 aa4.17□□□□□ -1.74
SIN3A-203ENST00000394949 LCE1CQ5T751 118 aa4.12□□□□□ -1.75
SIN3A-203ENST00000394949 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
SIN3A-203ENST00000394949 LCE1FQ5T754 118 aa4.12□□□□□ -1.75
SIN3A-203ENST00000394949 KRTAP5-9P26371 169 aa4.04□□□□□ -1.76
SIN3A-203ENST00000394949 MUC19Q7Z5P9 8384 aa4.03□□□□□ -1.76
SIN3A-203ENST00000394949 MDN1Q9NU22 5596 aa4□□□□□ -1.77
SIN3A-203ENST00000394949 NEBP20929 6669 aa3.95□□□□□ -1.78
SIN3A-203ENST00000394949 GPR98Q8WXG9 6306 aa3.93□□□□□ -1.78
SIN3A-203ENST00000394949 KRTAP9-9Q9BYP9 154 aa3.9□□□□□ -1.79
SIN3A-203ENST00000394949 SSPOA2VEC9 5147 aa3.88□□□□□ -1.79
SIN3A-203ENST00000394949 MUC12Q9UKN1 5478 aa3.83□□□□□ -1.8
SIN3A-203ENST00000394949 KRTAP4-11Q9BYQ6 195 aa3.81□□□□□ -1.8
SIN3A-203ENST00000394949 KRTAP4-6Q9BYQ5 205 aa3.79□□□□□ -1.8
SIN3A-203ENST00000394949 KRTAP20-2Q3LI61 65 aa3.79□□□□□ -1.8
SIN3A-203ENST00000394949 KRTAP5-5Q701N2 237 aaPredicted RBP3.76□□□□□ -1.81
SIN3A-203ENST00000394949 KRTAP5-4Q6L8H1 288 aa3.51□□□□□ -1.85
SIN3A-203ENST00000394949 KRTAP4-4Q9BYR3 166 aa3.34□□□□□ -1.87
SIN3A-203ENST00000394949 KRTAP4-12Q9BQ66 201 aa3.32□□□□□ -1.88
SIN3A-203ENST00000394949 KRTAP4-2Q9BYR5 136 aa3.32□□□□□ -1.88
SIN3A-203ENST00000394949 MUC5ACP98088 5654 aa3.26□□□□□ -1.89
SIN3A-203ENST00000394949 HMCN1Q96RW7 5635 aa3.21□□□□□ -1.9
SIN3A-203ENST00000394949 AHNAK2Q8IVF2 5795 aa3.16□□□□□ -1.9
SIN3A-203ENST00000394949 KRTAP5-3Q6L8H2 238 aa3.1□□□□□ -1.91
SIN3A-203ENST00000394949 KRTAP5-10Q6L8G5 202 aa2.95□□□□□ -1.94
SIN3A-203ENST00000394949 KRTAP5-8O75690 187 aa2.82□□□□□ -1.96
SIN3A-203ENST00000394949 KRTAP5-2Q701N4 177 aa2.79□□□□□ -1.96
SIN3A-203ENST00000394949 MUC5BQ9HC84 5762 aaPredicted RBP2.63□□□□□ -1.99
SIN3A-203ENST00000394949 AHNAKQ09666 5890 aaKnown RBP2.62□□□□□ -1.99
SIN3A-203ENST00000394949 KRTAP5-11Q6L8G4 156 aa2.55□□□□□ -2
SIN3A-203ENST00000394949 KRTAP5-1Q6L8H4 278 aa2.5□□□□□ -2.01
SIN3A-203ENST00000394949 PHGR1C9JFL3 82 aa2.49□□□□□ -2.01
SIN3A-203ENST00000394949 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
SIN3A-203ENST00000394949 KRTAP21-2Q3LI59 83 aa2.44□□□□□ -2.02
SIN3A-203ENST00000394949 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.34□□□□□ -2.04
SIN3A-203ENST00000394949 KRTAP5-7Q6L8G8 165 aa2.15□□□□□ -2.07
SIN3A-203ENST00000394949 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 6.5 ms