RNA–Protein interactions for RNA: ENST00000389858.4

LGR4-202, Transcript of leucine rich repeat containing G protein-coupled receptor 4, humanhuman

TSL 1 (best) BASIC

Gene LGR4, Length 5,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR4-202ENST00000389858 KRTAP9-2Q9BYQ4 174 aa6.43□□□□□ -1.38
LGR4-202ENST00000389858 MT3P25713 68 aa6.41□□□□□ -1.38
LGR4-202ENST00000389858 UBR4Q5T4S7 5183 aa6.38□□□□□ -1.39
LGR4-202ENST00000389858 RNF213Q63HN8 5207 aa6.36□□□□□ -1.39
LGR4-202ENST00000389858 MT4P47944 62 aa6.33□□□□□ -1.4
LGR4-202ENST00000389858 FAT4Q6V0I7 4981 aa6.33□□□□□ -1.4
LGR4-202ENST00000389858 LOC100996750A0A140TA64 210 aa6.33□□□□□ -1.4
LGR4-202ENST00000389858 LCE2AQ5TA79 106 aaPredicted RBP6.31□□□□□ -1.4
LGR4-202ENST00000389858 KRTAP4-3Q9BYR4 195 aa6.31□□□□□ -1.4
LGR4-202ENST00000389858 FSIP2Q5CZC0 6907 aa6.27□□□□□ -1.41
LGR4-202ENST00000389858 KRTAP19-7Q3SYF9 63 aa6.23□□□□□ -1.41
LGR4-202ENST00000389858 HMCN2Q8NDA2 5059 aa6.16□□□□□ -1.42
LGR4-202ENST00000389858 PRM1P04553 51 aa6.12□□□□□ -1.43
LGR4-202ENST00000389858 MT1AP04731 61 aa6.09□□□□□ -1.44
LGR4-202ENST00000389858 MUC2Q02817 5179 aa6.07□□□□□ -1.44
LGR4-202ENST00000389858 LCE1BQ5T7P3 118 aa6.07□□□□□ -1.44
LGR4-202ENST00000389858 LCE1DQ5T752 114 aa6.06□□□□□ -1.44
LGR4-202ENST00000389858 KRTAP9-6A0A140TA67 174 aa6.05□□□□□ -1.44
LGR4-202ENST00000389858 KRTAP2-3P0C7H8 128 aa5.93□□□□□ -1.46
LGR4-202ENST00000389858 KRTAP2-4Q9BYR9 128 aa5.93□□□□□ -1.46
LGR4-202ENST00000389858 KRTAP2-1Q9BYU5 128 aa5.93□□□□□ -1.46
LGR4-202ENST00000389858 KRTAP4-9Q9BYQ8 210 aa5.86□□□□□ -1.47
LGR4-202ENST00000389858 LCE1AQ5T7P2 110 aa5.84□□□□□ -1.47
LGR4-202ENST00000389858 SYNE2Q8WXH0 6885 aaKnown RBP5.83□□□□□ -1.48
LGR4-202ENST00000389858 OBSCNQ5VST9 7968 aa5.81□□□□□ -1.48
LGR4-202ENST00000389858 KRTAP20-1Q3LI63 56 aa5.78□□□□□ -1.48
LGR4-202ENST00000389858 KRTAP6-3Q3LI67 103 aa5.76□□□□□ -1.49
LGR4-202ENST00000389858 KRTAP9-7A8MTY7 169 aa5.75□□□□□ -1.49
LGR4-202ENST00000389858 KRTAP6-1Q3LI64 71 aa5.68□□□□□ -1.5
LGR4-202ENST00000389858 LCE5AQ5TCM9 118 aa5.68□□□□□ -1.5
LGR4-202ENST00000389858 KRTAP9-6A8MVA2 160 aa5.66□□□□□ -1.5
LGR4-202ENST00000389858 KRTAP6-2Q3LI66 62 aa5.61□□□□□ -1.51
LGR4-202ENST00000389858 KRTAP9-4Q9BYQ2 154 aa5.58□□□□□ -1.52
LGR4-202ENST00000389858 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.57□□□□□ -1.52
LGR4-202ENST00000389858 LCE4AQ5TA78 99 aa5.53□□□□□ -1.52
LGR4-202ENST00000389858 FCGBPQ9Y6R7 5405 aaPredicted RBP5.5□□□□□ -1.53
LGR4-202ENST00000389858 KRTAP2-2Q9BYT5 123 aa5.44□□□□□ -1.54
LGR4-202ENST00000389858 USH2AO75445 5202 aa5.44□□□□□ -1.54
LGR4-202ENST00000389858 DSTQ03001 7570 aaKnown RBP5.39□□□□□ -1.55
LGR4-202ENST00000389858 KMT2DO14686 5537 aa5.29□□□□□ -1.56
LGR4-202ENST00000389858 LCE1CQ5T751 118 aa5.13□□□□□ -1.59
LGR4-202ENST00000389858 LCE1EQ5T753 118 aa5.13□□□□□ -1.59
LGR4-202ENST00000389858 LCE1FQ5T754 118 aa5.13□□□□□ -1.59
LGR4-202ENST00000389858 MACF1Q9UPN3 7388 aaKnown RBP5.08□□□□□ -1.6
LGR4-202ENST00000389858 MUC12Q9UKN1 5478 aa4.93□□□□□ -1.62
LGR4-202ENST00000389858 NEBP20929 6669 aa4.93□□□□□ -1.62
LGR4-202ENST00000389858 KRTAP5-9P26371 169 aa4.92□□□□□ -1.62
LGR4-202ENST00000389858 SSPOA2VEC9 5147 aa4.85□□□□□ -1.63
LGR4-202ENST00000389858 KRTAP9-9Q9BYP9 154 aa4.8□□□□□ -1.64
LGR4-202ENST00000389858 MDN1Q9NU22 5596 aa4.77□□□□□ -1.65
LGR4-202ENST00000389858 KRTAP4-6Q9BYQ5 205 aa4.72□□□□□ -1.65
LGR4-202ENST00000389858 MUC19Q7Z5P9 8384 aa4.68□□□□□ -1.66
LGR4-202ENST00000389858 KRTAP20-2Q3LI61 65 aa4.66□□□□□ -1.66
LGR4-202ENST00000389858 GPR98Q8WXG9 6306 aa4.53□□□□□ -1.68
LGR4-202ENST00000389858 KRTAP4-11Q9BYQ6 195 aa4.51□□□□□ -1.69
LGR4-202ENST00000389858 KRTAP5-4Q6L8H1 288 aa4.31□□□□□ -1.72
LGR4-202ENST00000389858 KRTAP4-4Q9BYR3 166 aa4.22□□□□□ -1.73
LGR4-202ENST00000389858 KRTAP4-12Q9BQ66 201 aa4.18□□□□□ -1.74
LGR4-202ENST00000389858 KRTAP4-2Q9BYR5 136 aa4.18□□□□□ -1.74
LGR4-202ENST00000389858 KRTAP5-5Q701N2 237 aaPredicted RBP4.15□□□□□ -1.74
LGR4-202ENST00000389858 MUC5ACP98088 5654 aa3.95□□□□□ -1.78
LGR4-202ENST00000389858 HMCN1Q96RW7 5635 aa3.82□□□□□ -1.8
LGR4-202ENST00000389858 KRTAP5-3Q6L8H2 238 aa3.79□□□□□ -1.8
LGR4-202ENST00000389858 AHNAK2Q8IVF2 5795 aa3.74□□□□□ -1.81
LGR4-202ENST00000389858 KRTAP5-8O75690 187 aa3.48□□□□□ -1.85
LGR4-202ENST00000389858 KRTAP5-10Q6L8G5 202 aa3.38□□□□□ -1.87
LGR4-202ENST00000389858 KRTAP5-2Q701N4 177 aa3.38□□□□□ -1.87
LGR4-202ENST00000389858 MUC5BQ9HC84 5762 aaPredicted RBP3.23□□□□□ -1.89
LGR4-202ENST00000389858 AHNAKQ09666 5890 aaKnown RBP3.16□□□□□ -1.9
LGR4-202ENST00000389858 PHGR1C9JFL3 82 aa3.11□□□□□ -1.91
LGR4-202ENST00000389858 KRTAP5-11Q6L8G4 156 aa3.07□□□□□ -1.92
LGR4-202ENST00000389858 KRTAP5-1Q6L8H4 278 aa3□□□□□ -1.93
LGR4-202ENST00000389858 KRTAP21-2Q3LI59 83 aa2.89□□□□□ -1.95
LGR4-202ENST00000389858 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.69□□□□□ -1.98
LGR4-202ENST00000389858 KRTAP21-1Q3LI58 79 aa2.56□□□□□ -2
LGR4-202ENST00000389858 KRTAP5-7Q6L8G8 165 aa2.48□□□□□ -2.01
LGR4-202ENST00000389858 MUC16Q8WXI7 14507 aa1.86□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 13.3 ms