RNA–Protein interactions for RNA: ENST00000354336.7

CRKL-201, Transcript of CRK like proto-oncogene, adaptor protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRKL, Length 5,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRKL-201ENST00000354336 LOC100996750A0A140TA64 210 aa5.44□□□□□ -1.54
CRKL-201ENST00000354336 PRM1P04553 51 aa5.39□□□□□ -1.55
CRKL-201ENST00000354336 KRTAP4-3Q9BYR4 195 aa5.39□□□□□ -1.55
CRKL-201ENST00000354336 KRTAP19-7Q3SYF9 63 aa5.32□□□□□ -1.56
CRKL-201ENST00000354336 MT4P47944 62 aa5.3□□□□□ -1.56
CRKL-201ENST00000354336 SYNE1Q8NF91 8797 aaKnown RBP5.25□□□□□ -1.57
CRKL-201ENST00000354336 RNF213Q63HN8 5207 aa5.23□□□□□ -1.57
CRKL-201ENST00000354336 MT1AP04731 61 aa5.22□□□□□ -1.57
CRKL-201ENST00000354336 FAT4Q6V0I7 4981 aa5.21□□□□□ -1.57
CRKL-201ENST00000354336 LCE2AQ5TA79 106 aaPredicted RBP5.2□□□□□ -1.58
CRKL-201ENST00000354336 KRTAP9-2Q9BYQ4 174 aa5.2□□□□□ -1.58
CRKL-201ENST00000354336 KRTAP2-3P0C7H8 128 aa5.19□□□□□ -1.58
CRKL-201ENST00000354336 KRTAP2-4Q9BYR9 128 aa5.19□□□□□ -1.58
CRKL-201ENST00000354336 KRTAP2-1Q9BYU5 128 aa5.19□□□□□ -1.58
CRKL-201ENST00000354336 UBR4Q5T4S7 5183 aa5.17□□□□□ -1.58
CRKL-201ENST00000354336 HMCN2Q8NDA2 5059 aa5.16□□□□□ -1.58
CRKL-201ENST00000354336 LCE1BQ5T7P3 118 aa5.15□□□□□ -1.58
CRKL-201ENST00000354336 LCE1DQ5T752 114 aa5.14□□□□□ -1.59
CRKL-201ENST00000354336 FSIP2Q5CZC0 6907 aa5.13□□□□□ -1.59
CRKL-201ENST00000354336 KRTAP4-9Q9BYQ8 210 aa5.07□□□□□ -1.6
CRKL-201ENST00000354336 MUC2Q02817 5179 aa4.93□□□□□ -1.62
CRKL-201ENST00000354336 KRTAP9-6A8MVA2 160 aa4.92□□□□□ -1.62
CRKL-201ENST00000354336 LCE1AQ5T7P2 110 aa4.88□□□□□ -1.63
CRKL-201ENST00000354336 KRTAP6-1Q3LI64 71 aa4.87□□□□□ -1.63
CRKL-201ENST00000354336 KRTAP9-6A0A140TA67 174 aa4.85□□□□□ -1.63
CRKL-201ENST00000354336 LCE5AQ5TCM9 118 aa4.81□□□□□ -1.64
CRKL-201ENST00000354336 OBSCNQ5VST9 7968 aa4.8□□□□□ -1.64
CRKL-201ENST00000354336 SYNE2Q8WXH0 6885 aaKnown RBP4.79□□□□□ -1.64
CRKL-201ENST00000354336 KRTAP9-4Q9BYQ2 154 aa4.79□□□□□ -1.64
CRKL-201ENST00000354336 KRTAP6-2Q3LI66 62 aa4.79□□□□□ -1.64
CRKL-201ENST00000354336 KRTAP6-3Q3LI67 103 aa4.74□□□□□ -1.65
CRKL-201ENST00000354336 KRTAP20-1Q3LI63 56 aa4.71□□□□□ -1.65
CRKL-201ENST00000354336 LCE4AQ5TA78 99 aa4.63□□□□□ -1.67
CRKL-201ENST00000354336 KRTAP9-7A8MTY7 169 aa4.63□□□□□ -1.67
CRKL-201ENST00000354336 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.52□□□□□ -1.69
CRKL-201ENST00000354336 KRTAP2-2Q9BYT5 123 aa4.46□□□□□ -1.69
CRKL-201ENST00000354336 USH2AO75445 5202 aa4.46□□□□□ -1.7
CRKL-201ENST00000354336 FCGBPQ9Y6R7 5405 aaPredicted RBP4.43□□□□□ -1.7
CRKL-201ENST00000354336 LCE1CQ5T751 118 aa4.33□□□□□ -1.72
CRKL-201ENST00000354336 LCE1EQ5T753 118 aa4.33□□□□□ -1.72
CRKL-201ENST00000354336 LCE1FQ5T754 118 aa4.33□□□□□ -1.72
CRKL-201ENST00000354336 DSTQ03001 7570 aaKnown RBP4.19□□□□□ -1.74
CRKL-201ENST00000354336 KMT2DO14686 5537 aa4.15□□□□□ -1.75
CRKL-201ENST00000354336 KRTAP5-9P26371 169 aa4.08□□□□□ -1.76
CRKL-201ENST00000354336 SSPOA2VEC9 5147 aa4.03□□□□□ -1.76
CRKL-201ENST00000354336 MACF1Q9UPN3 7388 aaKnown RBP3.99□□□□□ -1.77
CRKL-201ENST00000354336 KRTAP9-9Q9BYP9 154 aa3.98□□□□□ -1.77
CRKL-201ENST00000354336 NEBP20929 6669 aa3.97□□□□□ -1.77
CRKL-201ENST00000354336 KRTAP4-11Q9BYQ6 195 aa3.95□□□□□ -1.78
CRKL-201ENST00000354336 KRTAP4-6Q9BYQ5 205 aa3.93□□□□□ -1.78
CRKL-201ENST00000354336 KRTAP20-2Q3LI61 65 aa3.91□□□□□ -1.78
CRKL-201ENST00000354336 MUC12Q9UKN1 5478 aa3.86□□□□□ -1.79
CRKL-201ENST00000354336 MUC19Q7Z5P9 8384 aa3.81□□□□□ -1.8
CRKL-201ENST00000354336 MDN1Q9NU22 5596 aa3.75□□□□□ -1.81
CRKL-201ENST00000354336 KRTAP5-5Q701N2 237 aaPredicted RBP3.68□□□□□ -1.82
CRKL-201ENST00000354336 KRTAP5-4Q6L8H1 288 aa3.61□□□□□ -1.83
CRKL-201ENST00000354336 KRTAP4-4Q9BYR3 166 aa3.59□□□□□ -1.83
CRKL-201ENST00000354336 KRTAP4-12Q9BQ66 201 aa3.5□□□□□ -1.85
CRKL-201ENST00000354336 KRTAP4-2Q9BYR5 136 aa3.5□□□□□ -1.85
CRKL-201ENST00000354336 GPR98Q8WXG9 6306 aa3.48□□□□□ -1.85
CRKL-201ENST00000354336 MUC5ACP98088 5654 aa3.21□□□□□ -1.9
CRKL-201ENST00000354336 KRTAP5-3Q6L8H2 238 aa3.15□□□□□ -1.91
CRKL-201ENST00000354336 HMCN1Q96RW7 5635 aa3.07□□□□□ -1.92
CRKL-201ENST00000354336 AHNAK2Q8IVF2 5795 aa2.95□□□□□ -1.94
CRKL-201ENST00000354336 KRTAP5-10Q6L8G5 202 aa2.94□□□□□ -1.94
CRKL-201ENST00000354336 KRTAP5-8O75690 187 aa2.85□□□□□ -1.95
CRKL-201ENST00000354336 KRTAP5-2Q701N4 177 aa2.84□□□□□ -1.95
CRKL-201ENST00000354336 MUC5BQ9HC84 5762 aaPredicted RBP2.69□□□□□ -1.98
CRKL-201ENST00000354336 KRTAP5-11Q6L8G4 156 aa2.59□□□□□ -1.99
CRKL-201ENST00000354336 KRTAP5-1Q6L8H4 278 aa2.57□□□□□ -2
CRKL-201ENST00000354336 PHGR1C9JFL3 82 aa2.54□□□□□ -2
CRKL-201ENST00000354336 AHNAKQ09666 5890 aaKnown RBP2.52□□□□□ -2.01
CRKL-201ENST00000354336 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
CRKL-201ENST00000354336 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
CRKL-201ENST00000354336 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.3□□□□□ -2.04
CRKL-201ENST00000354336 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
CRKL-201ENST00000354336 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 78.8 ms