RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 LCE2DQ5TA82 110 aaPredicted RBP6.4□□□□□ -1.39
LETM1-201ENST00000302787 MT3P25713 68 aa6.38□□□□□ -1.39
LETM1-201ENST00000302787 KRTAP19-7Q3SYF9 63 aa6.34□□□□□ -1.39
LETM1-201ENST00000302787 PRM1P04553 51 aa6.34□□□□□ -1.39
LETM1-201ENST00000302787 FAT4Q6V0I7 4981 aa6.32□□□□□ -1.4
LETM1-201ENST00000302787 RNF213Q63HN8 5207 aa6.29□□□□□ -1.4
LETM1-201ENST00000302787 HMCN2Q8NDA2 5059 aa6.28□□□□□ -1.4
LETM1-201ENST00000302787 MT4P47944 62 aa6.22□□□□□ -1.41
LETM1-201ENST00000302787 LCE2AQ5TA79 106 aaPredicted RBP6.21□□□□□ -1.41
LETM1-201ENST00000302787 UBR4Q5T4S7 5183 aa6.21□□□□□ -1.42
LETM1-201ENST00000302787 KRTAP2-3P0C7H8 128 aa6.17□□□□□ -1.42
LETM1-201ENST00000302787 KRTAP2-4Q9BYR9 128 aa6.17□□□□□ -1.42
LETM1-201ENST00000302787 KRTAP2-1Q9BYU5 128 aa6.17□□□□□ -1.42
LETM1-201ENST00000302787 KRTAP9-2Q9BYQ4 174 aa6.13□□□□□ -1.43
LETM1-201ENST00000302787 MT1AP04731 61 aa6.13□□□□□ -1.43
LETM1-201ENST00000302787 KRTAP4-9Q9BYQ8 210 aa6.05□□□□□ -1.44
LETM1-201ENST00000302787 SYNE1Q8NF91 8797 aaKnown RBP6.02□□□□□ -1.45
LETM1-201ENST00000302787 LCE1BQ5T7P3 118 aa6.01□□□□□ -1.45
LETM1-201ENST00000302787 LCE1DQ5T752 114 aa6□□□□□ -1.45
LETM1-201ENST00000302787 FSIP2Q5CZC0 6907 aa6□□□□□ -1.45
LETM1-201ENST00000302787 KRTAP9-6A8MVA2 160 aa5.92□□□□□ -1.46
LETM1-201ENST00000302787 MUC2Q02817 5179 aa5.87□□□□□ -1.47
LETM1-201ENST00000302787 KRTAP6-1Q3LI64 71 aa5.79□□□□□ -1.48
LETM1-201ENST00000302787 SYNE2Q8WXH0 6885 aaKnown RBP5.75□□□□□ -1.49
LETM1-201ENST00000302787 LCE5AQ5TCM9 118 aa5.71□□□□□ -1.5
LETM1-201ENST00000302787 LCE1AQ5T7P2 110 aa5.7□□□□□ -1.5
LETM1-201ENST00000302787 KRTAP9-6A0A140TA67 174 aa5.68□□□□□ -1.5
LETM1-201ENST00000302787 KRTAP6-2Q3LI66 62 aa5.66□□□□□ -1.5
LETM1-201ENST00000302787 KRTAP9-4Q9BYQ2 154 aa5.66□□□□□ -1.5
LETM1-201ENST00000302787 OBSCNQ5VST9 7968 aa5.59□□□□□ -1.51
LETM1-201ENST00000302787 KRTAP6-3Q3LI67 103 aa5.55□□□□□ -1.52
LETM1-201ENST00000302787 KRTAP20-1Q3LI63 56 aa5.49□□□□□ -1.53
LETM1-201ENST00000302787 KRTAP9-7A8MTY7 169 aa5.46□□□□□ -1.54
LETM1-201ENST00000302787 LCE4AQ5TA78 99 aa5.4□□□□□ -1.55
LETM1-201ENST00000302787 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.33□□□□□ -1.56
LETM1-201ENST00000302787 USH2AO75445 5202 aa5.33□□□□□ -1.56
LETM1-201ENST00000302787 FCGBPQ9Y6R7 5405 aaPredicted RBP5.27□□□□□ -1.57
LETM1-201ENST00000302787 KRTAP2-2Q9BYT5 123 aa5.2□□□□□ -1.58
LETM1-201ENST00000302787 KMT2DO14686 5537 aa5.15□□□□□ -1.59
LETM1-201ENST00000302787 LCE1CQ5T751 118 aa5.01□□□□□ -1.61
LETM1-201ENST00000302787 LCE1EQ5T753 118 aa5.01□□□□□ -1.61
LETM1-201ENST00000302787 LCE1FQ5T754 118 aa5.01□□□□□ -1.61
LETM1-201ENST00000302787 DSTQ03001 7570 aaKnown RBP4.95□□□□□ -1.62
LETM1-201ENST00000302787 SSPOA2VEC9 5147 aa4.9□□□□□ -1.62
LETM1-201ENST00000302787 KRTAP5-9P26371 169 aa4.85□□□□□ -1.63
LETM1-201ENST00000302787 MACF1Q9UPN3 7388 aaKnown RBP4.84□□□□□ -1.64
LETM1-201ENST00000302787 MUC12Q9UKN1 5478 aa4.71□□□□□ -1.65
LETM1-201ENST00000302787 KRTAP4-6Q9BYQ5 205 aa4.69□□□□□ -1.66
LETM1-201ENST00000302787 KRTAP4-11Q9BYQ6 195 aa4.68□□□□□ -1.66
LETM1-201ENST00000302787 NEBP20929 6669 aa4.67□□□□□ -1.66
LETM1-201ENST00000302787 KRTAP20-2Q3LI61 65 aa4.62□□□□□ -1.67
LETM1-201ENST00000302787 KRTAP9-9Q9BYP9 154 aa4.61□□□□□ -1.67
LETM1-201ENST00000302787 KRTAP5-5Q701N2 237 aaPredicted RBP4.44□□□□□ -1.7
LETM1-201ENST00000302787 MDN1Q9NU22 5596 aa4.38□□□□□ -1.71
LETM1-201ENST00000302787 MUC19Q7Z5P9 8384 aa4.34□□□□□ -1.71
LETM1-201ENST00000302787 KRTAP5-4Q6L8H1 288 aa4.27□□□□□ -1.73
LETM1-201ENST00000302787 KRTAP4-4Q9BYR3 166 aa4.26□□□□□ -1.73
LETM1-201ENST00000302787 KRTAP4-12Q9BQ66 201 aa4.14□□□□□ -1.75
LETM1-201ENST00000302787 KRTAP4-2Q9BYR5 136 aa4.14□□□□□ -1.75
LETM1-201ENST00000302787 GPR98Q8WXG9 6306 aa3.85□□□□□ -1.79
LETM1-201ENST00000302787 MUC5ACP98088 5654 aa3.8□□□□□ -1.8
LETM1-201ENST00000302787 KRTAP5-3Q6L8H2 238 aa3.71□□□□□ -1.82
LETM1-201ENST00000302787 HMCN1Q96RW7 5635 aa3.58□□□□□ -1.84
LETM1-201ENST00000302787 KRTAP5-10Q6L8G5 202 aa3.51□□□□□ -1.85
LETM1-201ENST00000302787 KRTAP5-2Q701N4 177 aa3.42□□□□□ -1.86
LETM1-201ENST00000302787 KRTAP5-8O75690 187 aa3.38□□□□□ -1.87
LETM1-201ENST00000302787 AHNAK2Q8IVF2 5795 aa3.38□□□□□ -1.87
LETM1-201ENST00000302787 MUC5BQ9HC84 5762 aaPredicted RBP3.17□□□□□ -1.9
LETM1-201ENST00000302787 KRTAP5-1Q6L8H4 278 aa3.09□□□□□ -1.92
LETM1-201ENST00000302787 KRTAP5-11Q6L8G4 156 aa3.06□□□□□ -1.92
LETM1-201ENST00000302787 KRTAP21-2Q3LI59 83 aa2.98□□□□□ -1.93
LETM1-201ENST00000302787 PHGR1C9JFL3 82 aa2.95□□□□□ -1.94
LETM1-201ENST00000302787 AHNAKQ09666 5890 aaKnown RBP2.92□□□□□ -1.94
LETM1-201ENST00000302787 KRTAP21-1Q3LI58 79 aa2.78□□□□□ -1.97
LETM1-201ENST00000302787 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.74□□□□□ -1.97
LETM1-201ENST00000302787 KRTAP5-7Q6L8G8 165 aa2.38□□□□□ -2.03
LETM1-201ENST00000302787 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 47.8 ms