RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 KRTAP19-7Q3SYF9 63 aa6.03□□□□□ -1.44
TSR1-201ENST00000301364 RNF213Q63HN8 5207 aa6.03□□□□□ -1.44
TSR1-201ENST00000301364 UBR4Q5T4S7 5183 aa6.02□□□□□ -1.45
TSR1-201ENST00000301364 LCE2AQ5TA79 106 aaPredicted RBP5.96□□□□□ -1.45
TSR1-201ENST00000301364 LOC100996750A0A140TA64 210 aa5.91□□□□□ -1.46
TSR1-201ENST00000301364 KRTAP2-3P0C7H8 128 aa5.89□□□□□ -1.47
TSR1-201ENST00000301364 KRTAP2-4Q9BYR9 128 aa5.89□□□□□ -1.47
TSR1-201ENST00000301364 KRTAP2-1Q9BYU5 128 aa5.89□□□□□ -1.47
TSR1-201ENST00000301364 KRTAP4-3Q9BYR4 195 aa5.87□□□□□ -1.47
TSR1-201ENST00000301364 LCE2DQ5TA82 110 aaPredicted RBP5.86□□□□□ -1.47
TSR1-201ENST00000301364 SYNE1Q8NF91 8797 aaKnown RBP5.82□□□□□ -1.48
TSR1-201ENST00000301364 MT3P25713 68 aa5.78□□□□□ -1.48
TSR1-201ENST00000301364 PRM1P04553 51 aa5.68□□□□□ -1.5
TSR1-201ENST00000301364 MT1AP04731 61 aa5.67□□□□□ -1.5
TSR1-201ENST00000301364 MUC2Q02817 5179 aa5.66□□□□□ -1.5
TSR1-201ENST00000301364 KRTAP9-6A8MVA2 160 aa5.66□□□□□ -1.5
TSR1-201ENST00000301364 FSIP2Q5CZC0 6907 aa5.62□□□□□ -1.51
TSR1-201ENST00000301364 KRTAP9-2Q9BYQ4 174 aa5.52□□□□□ -1.53
TSR1-201ENST00000301364 KRTAP4-9Q9BYQ8 210 aa5.47□□□□□ -1.53
TSR1-201ENST00000301364 MT4P47944 62 aa5.41□□□□□ -1.54
TSR1-201ENST00000301364 LCE5AQ5TCM9 118 aa5.41□□□□□ -1.54
TSR1-201ENST00000301364 LCE1AQ5T7P2 110 aa5.36□□□□□ -1.55
TSR1-201ENST00000301364 KRTAP6-1Q3LI64 71 aa5.34□□□□□ -1.55
TSR1-201ENST00000301364 OBSCNQ5VST9 7968 aa5.28□□□□□ -1.56
TSR1-201ENST00000301364 LCE1DQ5T752 114 aa5.24□□□□□ -1.57
TSR1-201ENST00000301364 LCE1BQ5T7P3 118 aa5.21□□□□□ -1.57
TSR1-201ENST00000301364 KRTAP9-4Q9BYQ2 154 aa5.21□□□□□ -1.58
TSR1-201ENST00000301364 USH2AO75445 5202 aa5.15□□□□□ -1.58
TSR1-201ENST00000301364 SYNE2Q8WXH0 6885 aaKnown RBP5.14□□□□□ -1.59
TSR1-201ENST00000301364 KRTAP6-2Q3LI66 62 aa5.14□□□□□ -1.59
TSR1-201ENST00000301364 FCGBPQ9Y6R7 5405 aaPredicted RBP5.11□□□□□ -1.59
TSR1-201ENST00000301364 KRTAP6-3Q3LI67 103 aa5.1□□□□□ -1.59
TSR1-201ENST00000301364 KRTAP9-6A0A140TA67 174 aa5.05□□□□□ -1.6
TSR1-201ENST00000301364 KRTAP9-7A8MTY7 169 aa4.99□□□□□ -1.61
TSR1-201ENST00000301364 KMT2DO14686 5537 aa4.97□□□□□ -1.61
TSR1-201ENST00000301364 LCE4AQ5TA78 99 aa4.92□□□□□ -1.62
TSR1-201ENST00000301364 DSTQ03001 7570 aaKnown RBP4.91□□□□□ -1.62
TSR1-201ENST00000301364 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.85□□□□□ -1.63
TSR1-201ENST00000301364 KRTAP20-1Q3LI63 56 aa4.78□□□□□ -1.64
TSR1-201ENST00000301364 SSPOA2VEC9 5147 aa4.7□□□□□ -1.66
TSR1-201ENST00000301364 KRTAP2-2Q9BYT5 123 aa4.7□□□□□ -1.66
TSR1-201ENST00000301364 KRTAP5-9P26371 169 aa4.68□□□□□ -1.66
TSR1-201ENST00000301364 MUC12Q9UKN1 5478 aa4.64□□□□□ -1.67
TSR1-201ENST00000301364 MACF1Q9UPN3 7388 aaKnown RBP4.56□□□□□ -1.68
TSR1-201ENST00000301364 KRTAP4-6Q9BYQ5 205 aa4.3□□□□□ -1.72
TSR1-201ENST00000301364 KRTAP20-2Q3LI61 65 aa4.29□□□□□ -1.72
TSR1-201ENST00000301364 KRTAP5-5Q701N2 237 aaPredicted RBP4.26□□□□□ -1.73
TSR1-201ENST00000301364 LCE1CQ5T751 118 aa4.23□□□□□ -1.73
TSR1-201ENST00000301364 LCE1EQ5T753 118 aa4.23□□□□□ -1.73
TSR1-201ENST00000301364 LCE1FQ5T754 118 aa4.23□□□□□ -1.73
TSR1-201ENST00000301364 NEBP20929 6669 aa4.19□□□□□ -1.74
TSR1-201ENST00000301364 MDN1Q9NU22 5596 aa4.18□□□□□ -1.74
TSR1-201ENST00000301364 KRTAP4-11Q9BYQ6 195 aa4.17□□□□□ -1.74
TSR1-201ENST00000301364 MUC19Q7Z5P9 8384 aa4.1□□□□□ -1.75
TSR1-201ENST00000301364 KRTAP9-9Q9BYP9 154 aa4.01□□□□□ -1.77
TSR1-201ENST00000301364 KRTAP5-4Q6L8H1 288 aa3.98□□□□□ -1.77
TSR1-201ENST00000301364 KRTAP4-4Q9BYR3 166 aa3.7□□□□□ -1.82
TSR1-201ENST00000301364 KRTAP4-12Q9BQ66 201 aa3.58□□□□□ -1.84
TSR1-201ENST00000301364 KRTAP4-2Q9BYR5 136 aa3.58□□□□□ -1.84
TSR1-201ENST00000301364 MUC5ACP98088 5654 aa3.57□□□□□ -1.84
TSR1-201ENST00000301364 GPR98Q8WXG9 6306 aa3.53□□□□□ -1.84
TSR1-201ENST00000301364 KRTAP5-3Q6L8H2 238 aa3.48□□□□□ -1.85
TSR1-201ENST00000301364 KRTAP5-2Q701N4 177 aa3.41□□□□□ -1.86
TSR1-201ENST00000301364 HMCN1Q96RW7 5635 aa3.41□□□□□ -1.86
TSR1-201ENST00000301364 KRTAP5-10Q6L8G5 202 aa3.39□□□□□ -1.87
TSR1-201ENST00000301364 AHNAK2Q8IVF2 5795 aa3.21□□□□□ -1.9
TSR1-201ENST00000301364 KRTAP5-8O75690 187 aa3.11□□□□□ -1.91
TSR1-201ENST00000301364 KRTAP5-11Q6L8G4 156 aa2.96□□□□□ -1.94
TSR1-201ENST00000301364 KRTAP5-1Q6L8H4 278 aa2.93□□□□□ -1.94
TSR1-201ENST00000301364 MUC5BQ9HC84 5762 aaPredicted RBP2.91□□□□□ -1.94
TSR1-201ENST00000301364 KRTAP21-2Q3LI59 83 aa2.9□□□□□ -1.94
TSR1-201ENST00000301364 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.8□□□□□ -1.96
TSR1-201ENST00000301364 KRTAP21-1Q3LI58 79 aa2.71□□□□□ -1.98
TSR1-201ENST00000301364 AHNAKQ09666 5890 aaKnown RBP2.67□□□□□ -1.98
TSR1-201ENST00000301364 PHGR1C9JFL3 82 aa2.49□□□□□ -2.01
TSR1-201ENST00000301364 KRTAP5-7Q6L8G8 165 aa2.44□□□□□ -2.02
TSR1-201ENST00000301364 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 80.4 ms