RNA–Protein interactions for RNA: ENST00000286627.10

KCNMA1-201, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNMA1, Length 6,194 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-201ENST00000286627 TNXBP22105 4242 aa5.14□□□□□ -1.59
KCNMA1-201ENST00000286627 MT3P25713 68 aa5.07□□□□□ -1.6
KCNMA1-201ENST00000286627 LCE2AQ5TA79 106 aaPredicted RBP5.04□□□□□ -1.6
KCNMA1-201ENST00000286627 RNF213Q63HN8 5207 aa5.02□□□□□ -1.61
KCNMA1-201ENST00000286627 KRTAP9-2Q9BYQ4 174 aa5.02□□□□□ -1.61
KCNMA1-201ENST00000286627 UBR4Q5T4S7 5183 aa5□□□□□ -1.61
KCNMA1-201ENST00000286627 LCE1BQ5T7P3 118 aa5□□□□□ -1.61
KCNMA1-201ENST00000286627 FAT4Q6V0I7 4981 aa4.99□□□□□ -1.61
KCNMA1-201ENST00000286627 KRTAP19-7Q3SYF9 63 aa4.98□□□□□ -1.61
KCNMA1-201ENST00000286627 LOC100996750A0A140TA64 210 aa4.96□□□□□ -1.62
KCNMA1-201ENST00000286627 KRTAP4-3Q9BYR4 195 aa4.95□□□□□ -1.62
KCNMA1-201ENST00000286627 LCE1DQ5T752 114 aa4.93□□□□□ -1.62
KCNMA1-201ENST00000286627 HMCN2Q8NDA2 5059 aa4.88□□□□□ -1.63
KCNMA1-201ENST00000286627 MT1AP04731 61 aa4.85□□□□□ -1.63
KCNMA1-201ENST00000286627 PRM1P04553 51 aa4.82□□□□□ -1.64
KCNMA1-201ENST00000286627 FSIP2Q5CZC0 6907 aa4.82□□□□□ -1.64
KCNMA1-201ENST00000286627 KRTAP9-6A0A140TA67 174 aa4.79□□□□□ -1.64
KCNMA1-201ENST00000286627 KRTAP2-3P0C7H8 128 aa4.75□□□□□ -1.65
KCNMA1-201ENST00000286627 KRTAP2-4Q9BYR9 128 aa4.75□□□□□ -1.65
KCNMA1-201ENST00000286627 KRTAP2-1Q9BYU5 128 aa4.75□□□□□ -1.65
KCNMA1-201ENST00000286627 MUC2Q02817 5179 aa4.73□□□□□ -1.65
KCNMA1-201ENST00000286627 LCE5AQ5TCM9 118 aa4.71□□□□□ -1.66
KCNMA1-201ENST00000286627 KRTAP20-1Q3LI63 56 aa4.68□□□□□ -1.66
KCNMA1-201ENST00000286627 LCE1AQ5T7P2 110 aa4.68□□□□□ -1.66
KCNMA1-201ENST00000286627 OBSCNQ5VST9 7968 aa4.6□□□□□ -1.67
KCNMA1-201ENST00000286627 KRTAP4-9Q9BYQ8 210 aa4.59□□□□□ -1.67
KCNMA1-201ENST00000286627 KRTAP6-3Q3LI67 103 aa4.55□□□□□ -1.68
KCNMA1-201ENST00000286627 SYNE2Q8WXH0 6885 aaKnown RBP4.54□□□□□ -1.68
KCNMA1-201ENST00000286627 KRTAP9-7A8MTY7 169 aa4.54□□□□□ -1.68
KCNMA1-201ENST00000286627 KRTAP9-6A8MVA2 160 aa4.53□□□□□ -1.68
KCNMA1-201ENST00000286627 KRTAP6-1Q3LI64 71 aa4.5□□□□□ -1.69
KCNMA1-201ENST00000286627 KRTAP9-4Q9BYQ2 154 aa4.44□□□□□ -1.7
KCNMA1-201ENST00000286627 KRTAP6-2Q3LI66 62 aa4.42□□□□□ -1.7
KCNMA1-201ENST00000286627 LCE1CQ5T751 118 aa4.41□□□□□ -1.7
KCNMA1-201ENST00000286627 LCE1EQ5T753 118 aa4.41□□□□□ -1.7
KCNMA1-201ENST00000286627 LCE1FQ5T754 118 aa4.41□□□□□ -1.7
KCNMA1-201ENST00000286627 LCE4AQ5TA78 99 aa4.39□□□□□ -1.71
KCNMA1-201ENST00000286627 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.36□□□□□ -1.71
KCNMA1-201ENST00000286627 KRTAP2-2Q9BYT5 123 aa4.28□□□□□ -1.72
KCNMA1-201ENST00000286627 USH2AO75445 5202 aa4.27□□□□□ -1.73
KCNMA1-201ENST00000286627 FCGBPQ9Y6R7 5405 aaPredicted RBP4.21□□□□□ -1.74
KCNMA1-201ENST00000286627 DSTQ03001 7570 aaKnown RBP4.08□□□□□ -1.76
KCNMA1-201ENST00000286627 KRTAP5-9P26371 169 aa3.95□□□□□ -1.78
KCNMA1-201ENST00000286627 MACF1Q9UPN3 7388 aaKnown RBP3.92□□□□□ -1.78
KCNMA1-201ENST00000286627 KRTAP9-9Q9BYP9 154 aa3.9□□□□□ -1.79
KCNMA1-201ENST00000286627 KMT2DO14686 5537 aa3.89□□□□□ -1.79
KCNMA1-201ENST00000286627 SSPOA2VEC9 5147 aa3.82□□□□□ -1.8
KCNMA1-201ENST00000286627 NEBP20929 6669 aa3.8□□□□□ -1.8
KCNMA1-201ENST00000286627 MUC12Q9UKN1 5478 aa3.73□□□□□ -1.81
KCNMA1-201ENST00000286627 MDN1Q9NU22 5596 aa3.72□□□□□ -1.81
KCNMA1-201ENST00000286627 MUC19Q7Z5P9 8384 aa3.71□□□□□ -1.82
KCNMA1-201ENST00000286627 KRTAP4-6Q9BYQ5 205 aa3.7□□□□□ -1.82
KCNMA1-201ENST00000286627 KRTAP20-2Q3LI61 65 aa3.69□□□□□ -1.82
KCNMA1-201ENST00000286627 KRTAP4-11Q9BYQ6 195 aa3.56□□□□□ -1.84
KCNMA1-201ENST00000286627 KRTAP4-12Q9BQ66 201 aa3.53□□□□□ -1.84
KCNMA1-201ENST00000286627 KRTAP4-4Q9BYR3 166 aa3.53□□□□□ -1.84
KCNMA1-201ENST00000286627 KRTAP4-2Q9BYR5 136 aa3.53□□□□□ -1.84
KCNMA1-201ENST00000286627 GPR98Q8WXG9 6306 aa3.49□□□□□ -1.85
KCNMA1-201ENST00000286627 KRTAP5-4Q6L8H1 288 aa3.44□□□□□ -1.86
KCNMA1-201ENST00000286627 KRTAP5-5Q701N2 237 aaPredicted RBP3.34□□□□□ -1.87
KCNMA1-201ENST00000286627 MUC5ACP98088 5654 aa3.08□□□□□ -1.92
KCNMA1-201ENST00000286627 KRTAP5-3Q6L8H2 238 aa3.01□□□□□ -1.93
KCNMA1-201ENST00000286627 HMCN1Q96RW7 5635 aa2.99□□□□□ -1.93
KCNMA1-201ENST00000286627 AHNAK2Q8IVF2 5795 aa2.93□□□□□ -1.94
KCNMA1-201ENST00000286627 KRTAP5-2Q701N4 177 aa2.75□□□□□ -1.97
KCNMA1-201ENST00000286627 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
KCNMA1-201ENST00000286627 KRTAP5-10Q6L8G5 202 aa2.73□□□□□ -1.97
KCNMA1-201ENST00000286627 PHGR1C9JFL3 82 aa2.67□□□□□ -1.98
KCNMA1-201ENST00000286627 MUC5BQ9HC84 5762 aaPredicted RBP2.54□□□□□ -2
KCNMA1-201ENST00000286627 KRTAP5-11Q6L8G4 156 aa2.48□□□□□ -2.01
KCNMA1-201ENST00000286627 AHNAKQ09666 5890 aaKnown RBP2.46□□□□□ -2.02
KCNMA1-201ENST00000286627 KRTAP5-1Q6L8H4 278 aa2.39□□□□□ -2.03
KCNMA1-201ENST00000286627 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
KCNMA1-201ENST00000286627 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.23□□□□□ -2.05
KCNMA1-201ENST00000286627 KRTAP21-1Q3LI58 79 aa2.1□□□□□ -2.07
KCNMA1-201ENST00000286627 KRTAP5-7Q6L8G8 165 aa1.94□□□□□ -2.1
KCNMA1-201ENST00000286627 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 147.8 ms