RNA–Protein interactions for RNA: ENST00000264025.7

NECTIN1-201, Transcript of nectin cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-201ENST00000264025 PRM1P04553 51 aa5.87□□□□□ -1.47
NECTIN1-201ENST00000264025 LOC100996750A0A140TA64 210 aa5.85□□□□□ -1.47
NECTIN1-201ENST00000264025 ABCA13Q86UQ4 5058 aa5.82□□□□□ -1.48
NECTIN1-201ENST00000264025 KRTAP4-3Q9BYR4 195 aa5.78□□□□□ -1.48
NECTIN1-201ENST00000264025 LCE1BQ5T7P3 118 aa5.76□□□□□ -1.49
NECTIN1-201ENST00000264025 KRTAP9-2Q9BYQ4 174 aa5.74□□□□□ -1.49
NECTIN1-201ENST00000264025 LCE1DQ5T752 114 aa5.73□□□□□ -1.49
NECTIN1-201ENST00000264025 SYNE1Q8NF91 8797 aaKnown RBP5.67□□□□□ -1.5
NECTIN1-201ENST00000264025 MT1AP04731 61 aa5.64□□□□□ -1.51
NECTIN1-201ENST00000264025 KRTAP19-7Q3SYF9 63 aa5.62□□□□□ -1.51
NECTIN1-201ENST00000264025 FAT4Q6V0I7 4981 aa5.6□□□□□ -1.51
NECTIN1-201ENST00000264025 RNF213Q63HN8 5207 aa5.58□□□□□ -1.52
NECTIN1-201ENST00000264025 LCE2AQ5TA79 106 aaPredicted RBP5.57□□□□□ -1.52
NECTIN1-201ENST00000264025 KRTAP2-3P0C7H8 128 aa5.5□□□□□ -1.53
NECTIN1-201ENST00000264025 KRTAP2-4Q9BYR9 128 aa5.5□□□□□ -1.53
NECTIN1-201ENST00000264025 KRTAP2-1Q9BYU5 128 aa5.5□□□□□ -1.53
NECTIN1-201ENST00000264025 HMCN2Q8NDA2 5059 aa5.49□□□□□ -1.53
NECTIN1-201ENST00000264025 UBR4Q5T4S7 5183 aa5.46□□□□□ -1.54
NECTIN1-201ENST00000264025 KRTAP4-9Q9BYQ8 210 aa5.46□□□□□ -1.54
NECTIN1-201ENST00000264025 KRTAP9-6A0A140TA67 174 aa5.42□□□□□ -1.54
NECTIN1-201ENST00000264025 LCE5AQ5TCM9 118 aa5.4□□□□□ -1.55
NECTIN1-201ENST00000264025 FSIP2Q5CZC0 6907 aa5.39□□□□□ -1.55
NECTIN1-201ENST00000264025 KRTAP20-1Q3LI63 56 aa5.32□□□□□ -1.56
NECTIN1-201ENST00000264025 LCE1AQ5T7P2 110 aa5.3□□□□□ -1.56
NECTIN1-201ENST00000264025 KRTAP6-1Q3LI64 71 aa5.22□□□□□ -1.57
NECTIN1-201ENST00000264025 MUC2Q02817 5179 aa5.22□□□□□ -1.57
NECTIN1-201ENST00000264025 KRTAP6-2Q3LI66 62 aa5.2□□□□□ -1.58
NECTIN1-201ENST00000264025 KRTAP6-3Q3LI67 103 aa5.19□□□□□ -1.58
NECTIN1-201ENST00000264025 OBSCNQ5VST9 7968 aa5.18□□□□□ -1.58
NECTIN1-201ENST00000264025 SYNE2Q8WXH0 6885 aaKnown RBP5.18□□□□□ -1.58
NECTIN1-201ENST00000264025 KRTAP9-4Q9BYQ2 154 aa5.18□□□□□ -1.58
NECTIN1-201ENST00000264025 KRTAP9-7A8MTY7 169 aa5.17□□□□□ -1.58
NECTIN1-201ENST00000264025 KRTAP9-6A8MVA2 160 aa5.12□□□□□ -1.59
NECTIN1-201ENST00000264025 LCE4AQ5TA78 99 aa5.1□□□□□ -1.59
NECTIN1-201ENST00000264025 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.96□□□□□ -1.62
NECTIN1-201ENST00000264025 KRTAP2-2Q9BYT5 123 aa4.95□□□□□ -1.62
NECTIN1-201ENST00000264025 LCE1CQ5T751 118 aa4.94□□□□□ -1.62
NECTIN1-201ENST00000264025 LCE1EQ5T753 118 aa4.94□□□□□ -1.62
NECTIN1-201ENST00000264025 LCE1FQ5T754 118 aa4.94□□□□□ -1.62
NECTIN1-201ENST00000264025 USH2AO75445 5202 aa4.69□□□□□ -1.66
NECTIN1-201ENST00000264025 FCGBPQ9Y6R7 5405 aaPredicted RBP4.59□□□□□ -1.67
NECTIN1-201ENST00000264025 KRTAP9-9Q9BYP9 154 aa4.51□□□□□ -1.69
NECTIN1-201ENST00000264025 DSTQ03001 7570 aaKnown RBP4.48□□□□□ -1.69
NECTIN1-201ENST00000264025 KMT2DO14686 5537 aa4.47□□□□□ -1.69
NECTIN1-201ENST00000264025 MACF1Q9UPN3 7388 aaKnown RBP4.36□□□□□ -1.71
NECTIN1-201ENST00000264025 KRTAP5-9P26371 169 aa4.35□□□□□ -1.71
NECTIN1-201ENST00000264025 SSPOA2VEC9 5147 aa4.31□□□□□ -1.72
NECTIN1-201ENST00000264025 KRTAP4-11Q9BYQ6 195 aa4.3□□□□□ -1.72
NECTIN1-201ENST00000264025 NEBP20929 6669 aa4.3□□□□□ -1.72
NECTIN1-201ENST00000264025 KRTAP4-6Q9BYQ5 205 aa4.24□□□□□ -1.73
NECTIN1-201ENST00000264025 KRTAP20-2Q3LI61 65 aa4.22□□□□□ -1.73
NECTIN1-201ENST00000264025 MUC19Q7Z5P9 8384 aa4.15□□□□□ -1.75
NECTIN1-201ENST00000264025 MUC12Q9UKN1 5478 aa4.12□□□□□ -1.75
NECTIN1-201ENST00000264025 MDN1Q9NU22 5596 aa3.99□□□□□ -1.77
NECTIN1-201ENST00000264025 KRTAP4-4Q9BYR3 166 aa3.96□□□□□ -1.78
NECTIN1-201ENST00000264025 KRTAP5-4Q6L8H1 288 aa3.89□□□□□ -1.79
NECTIN1-201ENST00000264025 GPR98Q8WXG9 6306 aa3.89□□□□□ -1.79
NECTIN1-201ENST00000264025 KRTAP4-12Q9BQ66 201 aa3.89□□□□□ -1.79
NECTIN1-201ENST00000264025 KRTAP4-2Q9BYR5 136 aa3.89□□□□□ -1.79
NECTIN1-201ENST00000264025 KRTAP5-5Q701N2 237 aaPredicted RBP3.79□□□□□ -1.8
NECTIN1-201ENST00000264025 MUC5ACP98088 5654 aa3.41□□□□□ -1.86
NECTIN1-201ENST00000264025 KRTAP5-3Q6L8H2 238 aa3.4□□□□□ -1.86
NECTIN1-201ENST00000264025 HMCN1Q96RW7 5635 aa3.23□□□□□ -1.89
NECTIN1-201ENST00000264025 AHNAK2Q8IVF2 5795 aa3.2□□□□□ -1.9
NECTIN1-201ENST00000264025 KRTAP5-8O75690 187 aa3.09□□□□□ -1.91
NECTIN1-201ENST00000264025 KRTAP5-10Q6L8G5 202 aa3.07□□□□□ -1.92
NECTIN1-201ENST00000264025 KRTAP5-2Q701N4 177 aa3.02□□□□□ -1.93
NECTIN1-201ENST00000264025 PHGR1C9JFL3 82 aa2.91□□□□□ -1.94
NECTIN1-201ENST00000264025 MUC5BQ9HC84 5762 aaPredicted RBP2.86□□□□□ -1.95
NECTIN1-201ENST00000264025 KRTAP5-11Q6L8G4 156 aa2.75□□□□□ -1.97
NECTIN1-201ENST00000264025 KRTAP5-1Q6L8H4 278 aa2.72□□□□□ -1.97
NECTIN1-201ENST00000264025 AHNAKQ09666 5890 aaKnown RBP2.71□□□□□ -1.98
NECTIN1-201ENST00000264025 KRTAP21-2Q3LI59 83 aa2.59□□□□□ -1.99
NECTIN1-201ENST00000264025 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.4□□□□□ -2.03
NECTIN1-201ENST00000264025 KRTAP21-1Q3LI58 79 aa2.39□□□□□ -2.03
NECTIN1-201ENST00000264025 KRTAP5-7Q6L8G8 165 aa2.09□□□□□ -2.08
NECTIN1-201ENST00000264025 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 67.7 ms