RNA–Protein interactions for RNA: ENST00000256062.9

TMTC1-201, Transcript of transmembrane and tetratricopeptide repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene TMTC1, Length 8,805 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC1-201ENST00000256062 LRP2P98164 4655 aa2.76□□□□□ -1.97
TMTC1-201ENST00000256062 SYNE1Q8NF91 8797 aaKnown RBP2.74□□□□□ -1.97
TMTC1-201ENST00000256062 MT1EP04732 61 aa2.73□□□□□ -1.97
TMTC1-201ENST00000256062 PRM1P04553 51 aa2.73□□□□□ -1.97
TMTC1-201ENST00000256062 FSIP2Q5CZC0 6907 aa2.72□□□□□ -1.97
TMTC1-201ENST00000256062 MT1MQ8N339 61 aa2.7□□□□□ -1.98
TMTC1-201ENST00000256062 KRTAP9-2Q9BYQ4 174 aa2.69□□□□□ -1.98
TMTC1-201ENST00000256062 KRTAP19-2Q3LHN2 52 aa2.65□□□□□ -1.98
TMTC1-201ENST00000256062 KRTAP4-9Q9BYQ8 210 aa2.64□□□□□ -1.99
TMTC1-201ENST00000256062 LCE5AQ5TCM9 118 aa2.63□□□□□ -1.99
TMTC1-201ENST00000256062 UBR4Q5T4S7 5183 aa2.62□□□□□ -1.99
TMTC1-201ENST00000256062 MUC2Q02817 5179 aa2.6□□□□□ -1.99
TMTC1-201ENST00000256062 SYNE2Q8WXH0 6885 aaKnown RBP2.59□□□□□ -1.99
TMTC1-201ENST00000256062 KRTAP19-6Q3LI70 58 aa2.58□□□□□ -2
TMTC1-201ENST00000256062 KRTAP9-6A0A140TA67 174 aa2.56□□□□□ -2
TMTC1-201ENST00000256062 RNF213Q63HN8 5207 aa2.55□□□□□ -2
TMTC1-201ENST00000256062 LCE2AQ5TA79 106 aaPredicted RBP2.54□□□□□ -2
TMTC1-201ENST00000256062 KRTAP20-1Q3LI63 56 aa2.51□□□□□ -2.01
TMTC1-201ENST00000256062 FAT4Q6V0I7 4981 aa2.5□□□□□ -2.01
TMTC1-201ENST00000256062 MT1AP04731 61 aa2.48□□□□□ -2.01
TMTC1-201ENST00000256062 OBSCNQ5VST9 7968 aa2.48□□□□□ -2.01
TMTC1-201ENST00000256062 LCE1CQ5T751 118 aa2.46□□□□□ -2.02
TMTC1-201ENST00000256062 LCE1EQ5T753 118 aa2.46□□□□□ -2.02
TMTC1-201ENST00000256062 LCE1FQ5T754 118 aa2.46□□□□□ -2.02
TMTC1-201ENST00000256062 LCE1AQ5T7P2 110 aa2.46□□□□□ -2.02
TMTC1-201ENST00000256062 KRTAP2-3P0C7H8 128 aa2.45□□□□□ -2.02
TMTC1-201ENST00000256062 KRTAP2-4Q9BYR9 128 aa2.45□□□□□ -2.02
TMTC1-201ENST00000256062 KRTAP2-1Q9BYU5 128 aa2.45□□□□□ -2.02
TMTC1-201ENST00000256062 KRTAP19-7Q3SYF9 63 aa2.45□□□□□ -2.02
TMTC1-201ENST00000256062 KRTAP9-7A8MTY7 169 aa2.44□□□□□ -2.02
TMTC1-201ENST00000256062 KRTAP6-2Q3LI66 62 aa2.41□□□□□ -2.02
TMTC1-201ENST00000256062 KRTAP6-1Q3LI64 71 aa2.39□□□□□ -2.03
TMTC1-201ENST00000256062 HMCN2Q8NDA2 5059 aa2.34□□□□□ -2.04
TMTC1-201ENST00000256062 USH2AO75445 5202 aa2.32□□□□□ -2.04
TMTC1-201ENST00000256062 KRTAP6-3Q3LI67 103 aa2.29□□□□□ -2.04
TMTC1-201ENST00000256062 KRTAP9-4Q9BYQ2 154 aa2.29□□□□□ -2.04
TMTC1-201ENST00000256062 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.29□□□□□ -2.04
TMTC1-201ENST00000256062 MACF1Q9UPN3 7388 aaKnown RBP2.27□□□□□ -2.05
TMTC1-201ENST00000256062 KRTAP9-6A8MVA2 160 aa2.26□□□□□ -2.05
TMTC1-201ENST00000256062 KRTAP2-2Q9BYT5 123 aa2.24□□□□□ -2.05
TMTC1-201ENST00000256062 FCGBPQ9Y6R7 5405 aaPredicted RBP2.22□□□□□ -2.05
TMTC1-201ENST00000256062 LCE4AQ5TA78 99 aa2.22□□□□□ -2.05
TMTC1-201ENST00000256062 DSTQ03001 7570 aaKnown RBP2.19□□□□□ -2.06
TMTC1-201ENST00000256062 KMT2DO14686 5537 aa2.13□□□□□ -2.07
TMTC1-201ENST00000256062 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
TMTC1-201ENST00000256062 KRTAP9-9Q9BYP9 154 aa2.1□□□□□ -2.07
TMTC1-201ENST00000256062 NEBP20929 6669 aa2.09□□□□□ -2.08
TMTC1-201ENST00000256062 KRTAP4-11Q9BYQ6 195 aa2.06□□□□□ -2.08
TMTC1-201ENST00000256062 KRTAP5-9P26371 169 aa2.05□□□□□ -2.08
TMTC1-201ENST00000256062 GPR98Q8WXG9 6306 aa2.03□□□□□ -2.09
TMTC1-201ENST00000256062 MDN1Q9NU22 5596 aa2.02□□□□□ -2.09
TMTC1-201ENST00000256062 KRTAP4-4Q9BYR3 166 aa2.02□□□□□ -2.09
TMTC1-201ENST00000256062 KRTAP20-2Q3LI61 65 aa2.01□□□□□ -2.09
TMTC1-201ENST00000256062 SSPOA2VEC9 5147 aa2.01□□□□□ -2.09
TMTC1-201ENST00000256062 KRTAP4-12Q9BQ66 201 aa2□□□□□ -2.09
TMTC1-201ENST00000256062 KRTAP4-6Q9BYQ5 205 aa2□□□□□ -2.09
TMTC1-201ENST00000256062 KRTAP4-2Q9BYR5 136 aa2□□□□□ -2.09
TMTC1-201ENST00000256062 MUC12Q9UKN1 5478 aa1.98□□□□□ -2.09
TMTC1-201ENST00000256062 KRTAP5-5Q701N2 237 aaPredicted RBP1.73□□□□□ -2.13
TMTC1-201ENST00000256062 KRTAP5-4Q6L8H1 288 aa1.68□□□□□ -2.14
TMTC1-201ENST00000256062 MUC5ACP98088 5654 aa1.66□□□□□ -2.14
TMTC1-201ENST00000256062 HMCN1Q96RW7 5635 aa1.61□□□□□ -2.15
TMTC1-201ENST00000256062 AHNAK2Q8IVF2 5795 aa1.57□□□□□ -2.16
TMTC1-201ENST00000256062 KRTAP5-3Q6L8H2 238 aa1.52□□□□□ -2.17
TMTC1-201ENST00000256062 KRTAP5-2Q701N4 177 aa1.51□□□□□ -2.17
TMTC1-201ENST00000256062 PHGR1C9JFL3 82 aa1.45□□□□□ -2.18
TMTC1-201ENST00000256062 KRTAP5-8O75690 187 aa1.43□□□□□ -2.18
TMTC1-201ENST00000256062 MUC5BQ9HC84 5762 aaPredicted RBP1.32□□□□□ -2.2
TMTC1-201ENST00000256062 KRTAP5-10Q6L8G5 202 aa1.31□□□□□ -2.2
TMTC1-201ENST00000256062 AHNAKQ09666 5890 aaKnown RBP1.31□□□□□ -2.2
TMTC1-201ENST00000256062 KRTAP5-7Q6L8G8 165 aa1.27□□□□□ -2.21
TMTC1-201ENST00000256062 KRTAP5-1Q6L8H4 278 aa1.26□□□□□ -2.21
TMTC1-201ENST00000256062 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.22□□□□□ -2.21
TMTC1-201ENST00000256062 KRTAP5-11Q6L8G4 156 aa1.17□□□□□ -2.22
TMTC1-201ENST00000256062 KRTAP21-2Q3LI59 83 aa1.08□□□□□ -2.24
TMTC1-201ENST00000256062 KRTAP21-1Q3LI58 79 aa1.08□□□□□ -2.24
TMTC1-201ENST00000256062 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 9.8 ms