RNA–Protein interactions for RNA: ENST00000224140.5

SETX-201, Transcript of senataxin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SETX, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETX-201ENST00000224140 KRTAP19-7Q3SYF9 63 aa1.99□□□□□ -2.09
SETX-201ENST00000224140 MT1AP04731 61 aa1.97□□□□□ -2.09
SETX-201ENST00000224140 KRTAP9-2Q9BYQ4 174 aa1.97□□□□□ -2.09
SETX-201ENST00000224140 PCLOQ9Y6V0 5065 aa1.97□□□□□ -2.09
SETX-201ENST00000224140 FAT4Q6V0I7 4981 aa1.95□□□□□ -2.1
SETX-201ENST00000224140 KRTAP2-3P0C7H8 128 aa1.94□□□□□ -2.1
SETX-201ENST00000224140 KRTAP2-4Q9BYR9 128 aa1.94□□□□□ -2.1
SETX-201ENST00000224140 KRTAP2-1Q9BYU5 128 aa1.94□□□□□ -2.1
SETX-201ENST00000224140 KRTAP6-3Q3LI67 103 aa1.93□□□□□ -2.1
SETX-201ENST00000224140 MUC2Q02817 5179 aa1.91□□□□□ -2.1
SETX-201ENST00000224140 LCE5AQ5TCM9 118 aa1.91□□□□□ -2.1
SETX-201ENST00000224140 ABCA13Q86UQ4 5058 aa1.9□□□□□ -2.11
SETX-201ENST00000224140 PRM1P04553 51 aa1.89□□□□□ -2.11
SETX-201ENST00000224140 LCE4AQ5TA78 99 aa1.89□□□□□ -2.11
SETX-201ENST00000224140 KRTAP9-6A0A140TA67 174 aa1.85□□□□□ -2.11
SETX-201ENST00000224140 MACF1Q9UPN3 7388 aaKnown RBP1.84□□□□□ -2.12
SETX-201ENST00000224140 KRTAP5-9P26371 169 aa1.83□□□□□ -2.12
SETX-201ENST00000224140 SYNE2Q8WXH0 6885 aaKnown RBP1.83□□□□□ -2.12
SETX-201ENST00000224140 KRTAP9-4Q9BYQ2 154 aa1.79□□□□□ -2.12
SETX-201ENST00000224140 KRTAP4-7Q9BYR0 210 aa1.78□□□□□ -2.12
SETX-201ENST00000224140 RNF213Q63HN8 5207 aa1.77□□□□□ -2.13
SETX-201ENST00000224140 KRTAP2-2Q9BYT5 123 aa1.75□□□□□ -2.13
SETX-201ENST00000224140 KRTAP9-7A8MTY7 169 aa1.75□□□□□ -2.13
SETX-201ENST00000224140 SYNE1Q8NF91 8797 aaKnown RBP1.75□□□□□ -2.13
SETX-201ENST00000224140 FSIP2Q5CZC0 6907 aa1.74□□□□□ -2.13
SETX-201ENST00000224140 LCE1DQ5T752 114 aa1.74□□□□□ -2.13
SETX-201ENST00000224140 UBR4Q5T4S7 5183 aa1.74□□□□□ -2.13
SETX-201ENST00000224140 LCE1BQ5T7P3 118 aa1.73□□□□□ -2.13
SETX-201ENST00000224140 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.73□□□□□ -2.13
SETX-201ENST00000224140 KRTAP20-1Q3LI63 56 aa1.73□□□□□ -2.13
SETX-201ENST00000224140 LOC100996750A0A140TA64 210 aa1.69□□□□□ -2.14
SETX-201ENST00000224140 KRTAP9-6A8MVA2 160 aa1.69□□□□□ -2.14
SETX-201ENST00000224140 MT4P47944 62 aa1.68□□□□□ -2.14
SETX-201ENST00000224140 KRTAP4-3Q9BYR4 195 aa1.67□□□□□ -2.14
SETX-201ENST00000224140 DSTQ03001 7570 aaKnown RBP1.66□□□□□ -2.14
SETX-201ENST00000224140 KRTAP6-1Q3LI64 71 aa1.66□□□□□ -2.14
SETX-201ENST00000224140 KRTAP6-2Q3LI66 62 aa1.62□□□□□ -2.15
SETX-201ENST00000224140 NEBP20929 6669 aa1.6□□□□□ -2.15
SETX-201ENST00000224140 KMT2DO14686 5537 aa1.57□□□□□ -2.16
SETX-201ENST00000224140 LCE1CQ5T751 118 aa1.57□□□□□ -2.16
SETX-201ENST00000224140 LCE1EQ5T753 118 aa1.57□□□□□ -2.16
SETX-201ENST00000224140 LCE1FQ5T754 118 aa1.57□□□□□ -2.16
SETX-201ENST00000224140 OBSCNQ5VST9 7968 aa1.57□□□□□ -2.16
SETX-201ENST00000224140 KRTAP5-5Q701N2 237 aaPredicted RBP1.54□□□□□ -2.16
SETX-201ENST00000224140 KRTAP4-9Q9BYQ8 210 aa1.52□□□□□ -2.17
SETX-201ENST00000224140 SSPOA2VEC9 5147 aa1.51□□□□□ -2.17
SETX-201ENST00000224140 KRTAP5-4Q6L8H1 288 aa1.5□□□□□ -2.17
SETX-201ENST00000224140 FCGBPQ9Y6R7 5405 aaPredicted RBP1.5□□□□□ -2.17
SETX-201ENST00000224140 KRTAP20-2Q3LI61 65 aa1.48□□□□□ -2.17
SETX-201ENST00000224140 KRTAP9-9Q9BYP9 154 aa1.46□□□□□ -2.18
SETX-201ENST00000224140 USH2AO75445 5202 aa1.42□□□□□ -2.18
SETX-201ENST00000224140 MDN1Q9NU22 5596 aa1.41□□□□□ -2.18
SETX-201ENST00000224140 MUC12Q9UKN1 5478 aa1.4□□□□□ -2.19
SETX-201ENST00000224140 KRTAP4-6Q9BYQ5 205 aa1.36□□□□□ -2.19
SETX-201ENST00000224140 KRTAP4-11Q9BYQ6 195 aa1.32□□□□□ -2.2
SETX-201ENST00000224140 KRTAP5-2Q701N4 177 aa1.31□□□□□ -2.2
SETX-201ENST00000224140 KRTAP5-3Q6L8H2 238 aa1.31□□□□□ -2.2
SETX-201ENST00000224140 KRTAP5-8O75690 187 aa1.23□□□□□ -2.21
SETX-201ENST00000224140 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.18□□□□□ -2.22
SETX-201ENST00000224140 MUC5ACP98088 5654 aa1.17□□□□□ -2.22
SETX-201ENST00000224140 KRTAP5-10Q6L8G5 202 aa1.16□□□□□ -2.22
SETX-201ENST00000224140 KRTAP5-11Q6L8G4 156 aa1.15□□□□□ -2.22
SETX-201ENST00000224140 KRTAP4-4Q9BYR3 166 aa1.14□□□□□ -2.23
SETX-201ENST00000224140 AHNAK2Q8IVF2 5795 aa1.1□□□□□ -2.23
SETX-201ENST00000224140 KRTAP5-7Q6L8G8 165 aa1.09□□□□□ -2.24
SETX-201ENST00000224140 KRTAP5-1Q6L8H4 278 aa1.08□□□□□ -2.24
SETX-201ENST00000224140 HMCN1Q96RW7 5635 aa1.07□□□□□ -2.24
SETX-201ENST00000224140 KRTAP4-2Q9BYR5 136 aa1.06□□□□□ -2.24
SETX-201ENST00000224140 MUC5BQ9HC84 5762 aaPredicted RBP1.05□□□□□ -2.24
SETX-201ENST00000224140 MUC19Q7Z5P9 8384 aa1.05□□□□□ -2.24
SETX-201ENST00000224140 KRTAP4-12Q9BQ66 201 aa1.05□□□□□ -2.24
SETX-201ENST00000224140 GPR98Q8WXG9 6306 aa1.03□□□□□ -2.24
SETX-201ENST00000224140 KRTAP21-2Q3LI59 83 aa1□□□□□ -2.25
SETX-201ENST00000224140 PHGR1C9JFL3 82 aa0.94□□□□□ -2.26
SETX-201ENST00000224140 KRTAP21-1Q3LI58 79 aa0.91□□□□□ -2.26
SETX-201ENST00000224140 AHNAKQ09666 5890 aaKnown RBP0.88□□□□□ -2.27
SETX-201ENST00000224140 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 11.8 ms