RNA–Protein interactions for RNA: ENST00000002596.5

HS3ST1-201, Transcript of heparan sulfate-glucosamine 3-sulfotransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HS3ST1, Length 8,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST1-201ENST00000002596 DNHD1Q96M86 4753 aa3.8□□□□□ -1.8
HS3ST1-201ENST00000002596 MT1EP04732 61 aa3.77□□□□□ -1.81
HS3ST1-201ENST00000002596 KRTAP9-2Q9BYQ4 174 aa3.71□□□□□ -1.81
HS3ST1-201ENST00000002596 MT1MQ8N339 61 aa3.7□□□□□ -1.82
HS3ST1-201ENST00000002596 KRTAP4-9Q9BYQ8 210 aa3.67□□□□□ -1.82
HS3ST1-201ENST00000002596 KRTAP17-1Q9BYP8 105 aa3.65□□□□□ -1.82
HS3ST1-201ENST00000002596 KRTAP4-3Q9BYR4 195 aa3.65□□□□□ -1.83
HS3ST1-201ENST00000002596 KRTAP20-1Q3LI63 56 aa3.63□□□□□ -1.83
HS3ST1-201ENST00000002596 KIAA1109Q2LD37 5005 aa3.62□□□□□ -1.83
HS3ST1-201ENST00000002596 KRTAP19-6Q3LI70 58 aa3.61□□□□□ -1.83
HS3ST1-201ENST00000002596 SYNE2Q8WXH0 6885 aaKnown RBP3.6□□□□□ -1.83
HS3ST1-201ENST00000002596 HERC2O95714 4834 aa3.56□□□□□ -1.84
HS3ST1-201ENST00000002596 LRP2P98164 4655 aa3.56□□□□□ -1.84
HS3ST1-201ENST00000002596 KRTAP9-6A0A140TA67 174 aa3.55□□□□□ -1.84
HS3ST1-201ENST00000002596 EPPK1P58107 5090 aaKnown RBP3.54□□□□□ -1.84
HS3ST1-201ENST00000002596 HMCN2Q8NDA2 5059 aa3.52□□□□□ -1.85
HS3ST1-201ENST00000002596 FAT4Q6V0I7 4981 aa3.5□□□□□ -1.85
HS3ST1-201ENST00000002596 USH2AO75445 5202 aa3.48□□□□□ -1.85
HS3ST1-201ENST00000002596 MT1AP04731 61 aa3.45□□□□□ -1.86
HS3ST1-201ENST00000002596 UBR4Q5T4S7 5183 aa3.45□□□□□ -1.86
HS3ST1-201ENST00000002596 LCE2AQ5TA79 106 aaPredicted RBP3.45□□□□□ -1.86
HS3ST1-201ENST00000002596 KRTAP2-3P0C7H8 128 aa3.43□□□□□ -1.86
HS3ST1-201ENST00000002596 KRTAP2-4Q9BYR9 128 aa3.43□□□□□ -1.86
HS3ST1-201ENST00000002596 KRTAP2-1Q9BYU5 128 aa3.43□□□□□ -1.86
HS3ST1-201ENST00000002596 KRTAP6-2Q3LI66 62 aa3.4□□□□□ -1.86
HS3ST1-201ENST00000002596 MUC17Q685J3 4493 aa3.4□□□□□ -1.87
HS3ST1-201ENST00000002596 KRTAP9-7A8MTY7 169 aa3.38□□□□□ -1.87
HS3ST1-201ENST00000002596 RNF213Q63HN8 5207 aa3.37□□□□□ -1.87
HS3ST1-201ENST00000002596 KRTAP19-2Q3LHN2 52 aa3.3□□□□□ -1.88
HS3ST1-201ENST00000002596 KRTAP6-3Q3LI67 103 aa3.27□□□□□ -1.89
HS3ST1-201ENST00000002596 KRTAP9-4Q9BYQ2 154 aa3.23□□□□□ -1.89
HS3ST1-201ENST00000002596 KRTAP2-2Q9BYT5 123 aa3.23□□□□□ -1.89
HS3ST1-201ENST00000002596 KRTAP19-7Q3SYF9 63 aa3.23□□□□□ -1.89
HS3ST1-201ENST00000002596 KRTAP6-1Q3LI64 71 aa3.21□□□□□ -1.9
HS3ST1-201ENST00000002596 KRTAP20-2Q3LI61 65 aa3.19□□□□□ -1.9
HS3ST1-201ENST00000002596 KRTAP9-9Q9BYP9 154 aa3.19□□□□□ -1.9
HS3ST1-201ENST00000002596 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.13□□□□□ -1.91
HS3ST1-201ENST00000002596 KRTAP4-11Q9BYQ6 195 aa3.09□□□□□ -1.91
HS3ST1-201ENST00000002596 KRTAP9-6A8MVA2 160 aa3□□□□□ -1.93
HS3ST1-201ENST00000002596 FSIP2Q5CZC0 6907 aa2.99□□□□□ -1.93
HS3ST1-201ENST00000002596 MDN1Q9NU22 5596 aa2.98□□□□□ -1.93
HS3ST1-201ENST00000002596 SSPOA2VEC9 5147 aa2.96□□□□□ -1.94
HS3ST1-201ENST00000002596 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
HS3ST1-201ENST00000002596 SYNE1Q8NF91 8797 aaKnown RBP2.94□□□□□ -1.94
HS3ST1-201ENST00000002596 GPR98Q8WXG9 6306 aa2.94□□□□□ -1.94
HS3ST1-201ENST00000002596 KMT2DO14686 5537 aa2.94□□□□□ -1.94
HS3ST1-201ENST00000002596 KRTAP4-6Q9BYQ5 205 aa2.88□□□□□ -1.95
HS3ST1-201ENST00000002596 KRTAP4-12Q9BQ66 201 aa2.85□□□□□ -1.95
HS3ST1-201ENST00000002596 KRTAP4-2Q9BYR5 136 aa2.85□□□□□ -1.95
HS3ST1-201ENST00000002596 NEBP20929 6669 aa2.8□□□□□ -1.96
HS3ST1-201ENST00000002596 MUC2Q02817 5179 aa2.79□□□□□ -1.96
HS3ST1-201ENST00000002596 MUC12Q9UKN1 5478 aa2.77□□□□□ -1.97
HS3ST1-201ENST00000002596 FCGBPQ9Y6R7 5405 aaPredicted RBP2.71□□□□□ -1.97
HS3ST1-201ENST00000002596 OBSCNQ5VST9 7968 aa2.71□□□□□ -1.98
HS3ST1-201ENST00000002596 AHNAK2Q8IVF2 5795 aa2.65□□□□□ -1.98
HS3ST1-201ENST00000002596 MUC5BQ9HC84 5762 aaPredicted RBP2.62□□□□□ -1.99
HS3ST1-201ENST00000002596 HMCN1Q96RW7 5635 aa2.61□□□□□ -1.99
HS3ST1-201ENST00000002596 AHNAKQ09666 5890 aaKnown RBP2.58□□□□□ -2
HS3ST1-201ENST00000002596 KRTAP5-9P26371 169 aa2.54□□□□□ -2
HS3ST1-201ENST00000002596 DSTQ03001 7570 aaKnown RBP2.51□□□□□ -2.01
HS3ST1-201ENST00000002596 MACF1Q9UPN3 7388 aaKnown RBP2.51□□□□□ -2.01
HS3ST1-201ENST00000002596 KRTAP5-4Q6L8H1 288 aa2.46□□□□□ -2.02
HS3ST1-201ENST00000002596 MUC19Q7Z5P9 8384 aa2.38□□□□□ -2.03
HS3ST1-201ENST00000002596 KRTAP5-5Q701N2 237 aaPredicted RBP2.25□□□□□ -2.05
HS3ST1-201ENST00000002596 MUC5ACP98088 5654 aa2.19□□□□□ -2.06
HS3ST1-201ENST00000002596 PHGR1C9JFL3 82 aa2.15□□□□□ -2.07
HS3ST1-201ENST00000002596 KRTAP5-3Q6L8H2 238 aa2.1□□□□□ -2.07
HS3ST1-201ENST00000002596 KRTAP5-8O75690 187 aa1.86□□□□□ -2.11
HS3ST1-201ENST00000002596 KRTAP5-2Q701N4 177 aa1.78□□□□□ -2.12
HS3ST1-201ENST00000002596 KRTAP5-10Q6L8G5 202 aa1.76□□□□□ -2.13
HS3ST1-201ENST00000002596 KRTAP5-11Q6L8G4 156 aa1.64□□□□□ -2.15
HS3ST1-201ENST00000002596 KRTAP21-1Q3LI58 79 aa1.62□□□□□ -2.15
HS3ST1-201ENST00000002596 KRTAP5-1Q6L8H4 278 aa1.59□□□□□ -2.15
HS3ST1-201ENST00000002596 KRTAP21-2Q3LI59 83 aa1.43□□□□□ -2.18
HS3ST1-201ENST00000002596 KRTAP5-7Q6L8G8 165 aa1.43□□□□□ -2.18
HS3ST1-201ENST00000002596 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.31□□□□□ -2.2
HS3ST1-201ENST00000002596 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 83.2 ms