RNA–Protein interactions for RNA: ENSMUST00000194038.1

Pcdha8-201, Transcript of Protocadherin alpha 8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha8, Length 5,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8-201ENSMUST00000194038 Ros1Q78DX7 2340 aa11.35□□□□□ -0.59
Pcdha8-201ENSMUST00000194038 Igkv6-15A0A140T8M5 115 aa11.35□□□□□ -0.59
Pcdha8-201ENSMUST00000194038 Gm20499D3Z4G5 72 aa11.35□□□□□ -0.59
Pcdha8-201ENSMUST00000194038 Ighv3-6P18531 116 aa11.35□□□□□ -0.59
Pcdha8-201ENSMUST00000194038 Cd24P24807 76 aa11.35□□□□□ -0.59
Pcdha8-201ENSMUST00000194038 Rpl32P62911 135 aaKnown RBP11.34□□□□□ -0.59
Pcdha8-201ENSMUST00000194038 BC048502Q80Y74 154 aa11.34□□□□□ -0.59
Pcdha8-201ENSMUST00000194038 Pfn2Q9JJV2 140 aa11.34□□□□□ -0.59
Pcdha8-201ENSMUST00000194038 Ank3G5E8K5 1961 aa11.34□□□□□ -0.59
Pcdha8-201ENSMUST00000194038 Plxna4Q80UG2 1893 aa11.34□□□□□ -0.59
Pcdha8-201ENSMUST00000194038 Gm2564F6Z9S8 108 aa11.34□□□□□ -0.59
Pcdha8-201ENSMUST00000194038 Ccl19O70460 108 aa11.34□□□□□ -0.59
Pcdha8-201ENSMUST00000194038 Gm10192Q3V0S1 108 aa11.34□□□□□ -0.59
Pcdha8-201ENSMUST00000194038 Fam216bQ8CC14 138 aa11.34□□□□□ -0.59
Pcdha8-201ENSMUST00000194038 Ss18l2Q9D174 77 aa11.34□□□□□ -0.59
Pcdha8-201ENSMUST00000194038 PtprfA2A8L5 1898 aa11.34□□□□□ -0.59
Pcdha8-201ENSMUST00000194038 Trav14d-3-dv8A0A075B619 120 aa11.33□□□□□ -0.59
Pcdha8-201ENSMUST00000194038 Gm2174F6ZVF2 133 aa11.33□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Fhl4Q8CDC8 279 aa11.33□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Tnfrsf23Q9ER63 176 aa11.33□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Inafm2A0A1L1STD6 152 aa11.33□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Gm9747Q810H1 104 aa11.33□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Med12lQ8BQM9 2157 aa11.33□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Igkv6-13A0A0G2JGY3 119 aa11.33□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 MplkipQ9D011 178 aa11.33□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Rpl35aO55142 110 aa11.33□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Loxl1P97873 607 aa11.32□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Fam241bQ9D882 120 aa11.32□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Gata4Q08369 441 aa11.32□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 CrebbpP45481 2441 aa11.32□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 MpdzQ8VBX6 2055 aa11.32□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Igkv3-1A0A075B5P1 119 aa11.32□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Igkv2-137A0A0B4J1H6 120 aa11.32□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 P01802 115 aa11.32□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Prok1Q14A28 105 aa11.32□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Spink10Q8CAC8 162 aa11.32□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 ArtnQ9Z0L2 224 aa11.31□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Rp1P56716 2095 aa11.31□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 E130218I03RikA0A0U1RNU5 63 aa11.31□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Ang5Q5GAN1 145 aa11.31□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Ntf4Q80VU4 209 aa11.31□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Gm9936Q8C864 160 aa11.31□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Sbf1Q6ZPE2 1867 aa11.31□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 RlfA2A7F4 1918 aa11.31□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 B1ARW8 110 aa11.31□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Ighv5-9-1A0A0A6YVS4 126 aa11.3□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 P01630 113 aa11.3□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Prdm6Q3UZD5 596 aa11.3□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 4930415O20RikQ8CDT5 131 aa11.3□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Ighv8-4A0A0A6YW26 117 aa11.3□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Gm9513B3GLJ6 99 aa11.3□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Cacna1hO88427 2365 aa11.3□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Dock7Q8R1A4 2130 aaKnown RBP11.3□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Igkv4-59A0A0B4J1I8 117 aa11.3□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Igkv4-81A0A0G2JEY5 119 aa11.3□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Igkv4-61A0A0G2JH00 117 aa11.3□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 ApomQ9Z1R3 190 aa11.3□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Sptbn2Q68FG2 2388 aa11.3□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Zfp951A0A087WRH0 451 aa11.29□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Reg3dQ9QUS9 175 aa11.29□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 P01738 130 aa11.29□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Wnk2Q3UH66 2149 aa11.29□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Igkv3-2A0A075B5P0 119 aa11.29□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 4933414I15RikQ9D4D5 133 aa11.29□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Igkv3-9A0A140T8P4 119 aa11.29□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Tmem243B2RVB9 118 aa11.29□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 P01786 117 aa11.29□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Edn1P22387 202 aa11.29□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Tmem258P61166 79 aa11.29□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Gm815Q3UWS2 115 aa11.29□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Dnajc13D4AFX7 2248 aaKnown RBP11.29□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Olfr311Q5NC59 308 aa11.28□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 P04940 107 aa11.28□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 P04941 107 aa11.28□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 GrnP28798 589 aaKnown RBP11.28□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Rbmy1bQ60990 380 aa11.28□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Q8R092 253 aa11.28□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Cdpf1Q8R3A2 119 aa11.28□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Zfhx2Q2MHN3 2562 aa11.28□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Q08AU9 97 aa11.28□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Fam24aQ8CF27 98 aa11.28□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Tax1bp3Q9DBG9 124 aa11.28□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Ighv1-64A0A075B5X3 117 aa11.28□□□□□ -0.6
Pcdha8-201ENSMUST00000194038 Myo9bQ9QY06 2114 aa11.27□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Pkd1l3Q2EG98 2201 aa11.27□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Gm8251F6VUT6 1994 aa11.27□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Tm2d1Q99MB3 208 aa11.27□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Qrich2A0A140LIY9 2337 aa11.27□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Igkv4-54A0A0G2JES9 117 aa11.27□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Trav9d-4A0A0G2JG37 103 aa11.27□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Mrps12O35680 139 aa11.27□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Cox17P56394 63 aa11.27□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Synj2bpQ9D6K5 145 aa11.27□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Gm15294V9GXA7 121 aa11.27□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Tanc1Q0VGY8 1856 aa11.26□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Rmi2Q3UPE3 149 aa11.26□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Spink12Q9D256 87 aa11.26□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Ndufa12Q7TMF3 145 aaKnown RBP11.26□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Ly6g6dQ9Z1Q3 135 aa11.26□□□□□ -0.61
Pcdha8-201ENSMUST00000194038 Igkv8-16A0A0G2JDG9 121 aa11.26□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 53.1 ms