RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Cr2P19070 1025 aa7.57□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Gm11110Q3U4K9 109 aa7.57□□□□□ -1.2
Col6a5-201ENSMUST00000165165 March3Q8BRX9 218 aa7.57□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Hrct1Q9D6B9 109 aa7.57□□□□□ -1.2
Col6a5-201ENSMUST00000165165 AcanQ61282 2132 aaKnown RBP7.57□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Tmem190Q9D2E9 166 aa7.57□□□□□ -1.2
Col6a5-201ENSMUST00000165165 RhohQ9D3G9 191 aa7.57□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Klk11Q9QYN3 276 aa7.57□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Trbv12-2A0A0B4J1H1 124 aa7.57□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Pde6hP61249 83 aa7.57□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Cxcl13O55038 109 aa7.57□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Iglc2P01844 104 aa7.57□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Pfn1P62962 140 aa7.57□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Usf3B2RUQ2 2221 aa7.56□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Ighv1-62-2A0A0A6YXZ4 119 aa7.56□□□□□ -1.2
Col6a5-201ENSMUST00000165165 P01667 111 aa7.56□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Wfdc9Q3UW41 83 aa7.56□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Ndufa12Q7TMF3 145 aaKnown RBP7.56□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Tet2Q4JK59 1912 aaKnown RBP7.56□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Ighv1-39A0A075B5V5 117 aa7.56□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Ighv1-81A0A075B5Y4 117 aa7.56□□□□□ -1.2
Col6a5-201ENSMUST00000165165 9130213A22RikQ3V3T2 120 aa7.56□□□□□ -1.2
Col6a5-201ENSMUST00000165165 DscamQ9ERC8 2013 aa7.56□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Sdk2Q6V4S5 2176 aa7.56□□□□□ -1.2
Col6a5-201ENSMUST00000165165 IappP12968 93 aa7.56□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Tmem171Q4KL18 322 aa7.56□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Trdv4Q5R1A3 115 aa7.56□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Tctex1d4Q8CDY7 219 aa7.56□□□□□ -1.2
Col6a5-201ENSMUST00000165165 ArtnQ9Z0L2 224 aa7.56□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Foxi3E0CZH3 425 aa7.56□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Shisa3Q3UPR0 238 aa7.56□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Prss22Q9ER10 306 aa7.56□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Gm20730A0A075B5J6 119 aa7.56□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Mapk1ip1Q9D7G9 263 aa7.56□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Foxf1Q61080 378 aa7.55□□□□□ -1.2
Col6a5-201ENSMUST00000165165 BC048562Q80ZQ7 204 aa7.55□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Igkv6-15A0A140T8M5 115 aa7.55□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Ndufb1P0DN34 57 aa7.55□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Ang3P97802 145 aa7.55□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Sdhaf1Q3U276 118 aa7.55□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Igkv10-95A0A0G2JFY3 115 aa7.55□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Gm4744D3Z3S5 154 aa7.55□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Gm17455G3UW87 128 aa7.55□□□□□ -1.2
Col6a5-201ENSMUST00000165165 9530003J23RikQ8BM26 151 aa7.55□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Q9CQM1 111 aa7.55□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Spta1P08032 2415 aa7.55□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Fgf4P11403 202 aa7.55□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Edn2P22389 175 aa7.55□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Tal2Q62282 108 aa7.55□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Smim10l1A0A087WNQ7 89 aa7.55□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Spaca3Q9D9X8 221 aa7.55□□□□□ -1.2
Col6a5-201ENSMUST00000165165 PpbpQ9EQI5 113 aa7.55□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Ighv8-4A0A0A6YW26 117 aa7.54□□□□□ -1.2
Col6a5-201ENSMUST00000165165 H2al1mQ9DAD9 105 aa7.54□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Ighv1-69A0A0G2JFS5 117 aa7.54□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Zc2hc1bQ9D534 172 aa7.54□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Gm37389A0A0A6YW05 95 aa7.54□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Defb47Q30KN1 79 aa7.54□□□□□ -1.2
Col6a5-201ENSMUST00000165165 C730034F03RikQ8BGL5 111 aa7.54□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Vpreb3D3Z6J4 130 aa7.54□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Igkv15-103A0A140T8P3 115 aa7.54□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Tax1bp3Q9DBG9 124 aa7.54□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Ighv1-62-1A0A075B5U3 116 aa7.53□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Gm28778A0A087WSK7 233 aa7.53□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Folr2Q05685 251 aa7.53□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Itgbl1Q8VDV0 494 aa7.53□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Ighv1-31A0A0A6YWK5 117 aa7.53□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Prp2P05143 317 aa7.53□□□□□ -1.2
Col6a5-201ENSMUST00000165165 4930415O20RikQ8CDT5 131 aa7.53□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Armcx4E9PWM3 2356 aa7.53□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Hivep3A2A884 2348 aa7.53□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Foxf2O54743 446 aa7.53□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Fam110dQ80X91 271 aa7.53□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Mustn1Q99JI1 82 aa7.53□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Igkv2-137A0A0B4J1H6 120 aa7.53□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Tmem263Q9DAM7 115 aa7.53□□□□□ -1.2
Col6a5-201ENSMUST00000165165 1700031F05RikB1AX30 191 aa7.53□□□□□ -1.2
Col6a5-201ENSMUST00000165165 P01787 123 aa7.53□□□□□ -1.2
Col6a5-201ENSMUST00000165165 PemtQ61907 199 aa7.53□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Ndufa4Q62425 82 aaKnown RBP7.53□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Tmem30bQ8BHG3 353 aa7.53□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Igkv3-4A0A140T8Q4 119 aa7.53□□□□□ -1.2
Col6a5-201ENSMUST00000165165 CrygdP04342 174 aa7.53□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Srsf2Q62093 221 aaKnown RBP7.53□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Cd300eQ8K249 196 aa7.53□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Synj2bpQ9D6K5 145 aa7.53□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Naa38Q9D2U5 125 aa7.52□□□□□ -1.2
Col6a5-201ENSMUST00000165165 Gm33815A0A087WNV3 176 aa7.52□□□□□ -1.21
Col6a5-201ENSMUST00000165165 BC035044E0CXF8 138 aa7.52□□□□□ -1.21
Col6a5-201ENSMUST00000165165 Olfr313Q5NC55 308 aa7.52□□□□□ -1.21
Col6a5-201ENSMUST00000165165 P01788 123 aa7.52□□□□□ -1.21
Col6a5-201ENSMUST00000165165 Gm10775Q3V290 127 aa7.52□□□□□ -1.21
Col6a5-201ENSMUST00000165165 Ighv1-16A0A075B5U1 98 aa7.52□□□□□ -1.21
Col6a5-201ENSMUST00000165165 Igkv4-92A0A0B4J1I2 117 aa7.52□□□□□ -1.21
Col6a5-201ENSMUST00000165165 Igkv19-93A0A0G2JFZ3 115 aa7.52□□□□□ -1.21
Col6a5-201ENSMUST00000165165 Prh1P05142 261 aa7.52□□□□□ -1.21
Col6a5-201ENSMUST00000165165 Ccl25O35903 144 aa7.52□□□□□ -1.21
Col6a5-201ENSMUST00000165165 Igh-VJ558P01758 117 aa7.52□□□□□ -1.21
Col6a5-201ENSMUST00000165165 Prdm6Q3UZD5 596 aa7.52□□□□□ -1.21
Col6a5-201ENSMUST00000165165 P01837 106 aa7.51□□□□□ -1.21
Retrieved 100 of 22,080 RNA–protein pairs in 49.1 ms