RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Ang5Q5GAN1 145 aa12.02□□□□□ -0.48
Trim39-203ENSMUST00000113706 Crip3Q6Q6R3 243 aa12.02□□□□□ -0.48
Trim39-203ENSMUST00000113706 Tctex1d4Q8CDY7 219 aa12.02□□□□□ -0.48
Trim39-203ENSMUST00000113706 Rpl11Q9CXW4 178 aaKnown RBP12.02□□□□□ -0.48
Trim39-203ENSMUST00000113706 Atp5iQ06185 71 aaKnown RBP12.02□□□□□ -0.49
Trim39-203ENSMUST00000113706 NpbQ8K4P1 119 aa12.02□□□□□ -0.49
Trim39-203ENSMUST00000113706 Ube2l6Q9QZU9 153 aa12.02□□□□□ -0.49
Trim39-203ENSMUST00000113706 Olfr1245A0A1L1SQJ6 307 aa12.01□□□□□ -0.49
Trim39-203ENSMUST00000113706 Tmem241Q3UME2 297 aa12.01□□□□□ -0.49
Trim39-203ENSMUST00000113706 Foxc2Q61850 494 aa12.01□□□□□ -0.49
Trim39-203ENSMUST00000113706 Srsf2Q62093 221 aaKnown RBP12.01□□□□□ -0.49
Trim39-203ENSMUST00000113706 3110018I06RikQ9CXS0 120 aa12.01□□□□□ -0.49
Trim39-203ENSMUST00000113706 Gm10553J3QPF1 123 aa12.01□□□□□ -0.49
Trim39-203ENSMUST00000113706 Borcs7Q9CRC6 105 aa12.01□□□□□ -0.49
Trim39-203ENSMUST00000113706 Psmb2Q9R1P3 201 aa12.01□□□□□ -0.49
Trim39-203ENSMUST00000113706 C2cd3Q52KB6 2323 aa12.01□□□□□ -0.49
Trim39-203ENSMUST00000113706 Cml3Q9JIY8 226 aa12.01□□□□□ -0.49
Trim39-203ENSMUST00000113706 Igkv4-70A0A0B4J1I5 116 aa12□□□□□ -0.49
Trim39-203ENSMUST00000113706 Igkv20-101-2A0A0G2JDU3 113 aa12□□□□□ -0.49
Trim39-203ENSMUST00000113706 Ighv1-62-3P01754 117 aa12□□□□□ -0.49
Trim39-203ENSMUST00000113706 Bsph1Q3UW26 133 aa12□□□□□ -0.49
Trim39-203ENSMUST00000113706 Olfr365Q8VFT2 312 aa12□□□□□ -0.49
Trim39-203ENSMUST00000113706 Gtsf1lQ9CWD0 151 aa12□□□□□ -0.49
Trim39-203ENSMUST00000113706 Ighv1-82A0A0G2JEU7 117 aa12□□□□□ -0.49
Trim39-203ENSMUST00000113706 Fhl1P97447 280 aaKnown RBP12□□□□□ -0.49
Trim39-203ENSMUST00000113706 CnfnQ6PCW6 111 aa12□□□□□ -0.49
Trim39-203ENSMUST00000113706 1520401A03RikA0A0J9YVH6 598 aa11.99□□□□□ -0.49
Trim39-203ENSMUST00000113706 Tnfrsf9P20334 256 aa11.99□□□□□ -0.49
Trim39-203ENSMUST00000113706 Rps20P60867 119 aaKnown RBP11.99□□□□□ -0.49
Trim39-203ENSMUST00000113706 Q9DAB9 146 aa11.99□□□□□ -0.49
Trim39-203ENSMUST00000113706 Ndufa4l2Q4FZG9 87 aa11.99□□□□□ -0.49
Trim39-203ENSMUST00000113706 Klf13Q9JJZ6 289 aa11.99□□□□□ -0.49
Trim39-203ENSMUST00000113706 Gm15294V9GXA7 121 aa11.99□□□□□ -0.49
Trim39-203ENSMUST00000113706 Gm1968Q3T9I3 115 aa11.98□□□□□ -0.49
Trim39-203ENSMUST00000113706 7420426K07RikQ3UX66 186 aa11.98□□□□□ -0.49
Trim39-203ENSMUST00000113706 Ufc1Q9CR09 167 aa11.98□□□□□ -0.49
Trim39-203ENSMUST00000113706 Tmem160Q9D938 188 aa11.98□□□□□ -0.49
Trim39-203ENSMUST00000113706 Fam213bQ9DB60 201 aa11.98□□□□□ -0.49
Trim39-203ENSMUST00000113706 PpbpQ9EQI5 113 aa11.98□□□□□ -0.49
Trim39-203ENSMUST00000113706 Tenm3Q9WTS6 2715 aa11.98□□□□□ -0.49
Trim39-203ENSMUST00000113706 Igkv4-69A0A0B4J1I6 116 aa11.98□□□□□ -0.49
Trim39-203ENSMUST00000113706 Omt2bD3YX29 119 aa11.98□□□□□ -0.49
Trim39-203ENSMUST00000113706 Timm8bP62077 83 aaKnown RBP11.98□□□□□ -0.49
Trim39-203ENSMUST00000113706 Vsig8Q6P3A4 417 aa11.98□□□□□ -0.49
Trim39-203ENSMUST00000113706 Dppa2Q9CWH0 301 aa11.98□□□□□ -0.49
Trim39-203ENSMUST00000113706 Gm45623A0A1B0GSF6 103 aa11.98□□□□□ -0.49
Trim39-203ENSMUST00000113706 TbpP29037 316 aa11.98□□□□□ -0.49
Trim39-203ENSMUST00000113706 Fam222aQ6PGH4 453 aa11.98□□□□□ -0.49
Trim39-203ENSMUST00000113706 Rnf185Q91YT2 192 aa11.98□□□□□ -0.49
Trim39-203ENSMUST00000113706 Q9D131 166 aa11.98□□□□□ -0.49
Trim39-203ENSMUST00000113706 TroQ6DIC6 2087 aa11.97□□□□□ -0.49
Trim39-203ENSMUST00000113706 Ighv1-9A0A0A6YW37 117 aa11.97□□□□□ -0.49
Trim39-203ENSMUST00000113706 Ighv1-52A0A0A6YXC3 117 aa11.97□□□□□ -0.49
Trim39-203ENSMUST00000113706 Trav14n-2A0A0G2JDF5 121 aa11.97□□□□□ -0.49
Trim39-203ENSMUST00000113706 Gm5426J3QNM7 103 aa11.97□□□□□ -0.49
Trim39-203ENSMUST00000113706 Ube2e2Q91W82 201 aa11.97□□□□□ -0.49
Trim39-203ENSMUST00000113706 Arhgap32Q811P8 2089 aa11.97□□□□□ -0.49
Trim39-203ENSMUST00000113706 Ighv8-6A0A0A6YXA3 118 aa11.97□□□□□ -0.49
Trim39-203ENSMUST00000113706 Ly86O88188 162 aa11.97□□□□□ -0.49
Trim39-203ENSMUST00000113706 Cib3Q0P523 160 aa11.97□□□□□ -0.49
Trim39-203ENSMUST00000113706 Trav3-3Q5R1C3 114 aa11.97□□□□□ -0.49
Trim39-203ENSMUST00000113706 Psmb11Q8BG41 302 aa11.97□□□□□ -0.49
Trim39-203ENSMUST00000113706 Krtap26-1Q9D7N2 215 aa11.97□□□□□ -0.49
Trim39-203ENSMUST00000113706 Gm20458E9PXJ7 78 aa11.96□□□□□ -0.49
Trim39-203ENSMUST00000113706 Klk15Q8CGR4 254 aa11.96□□□□□ -0.49
Trim39-203ENSMUST00000113706 SelenokQ9JLJ1 94 aa11.96□□□□□ -0.49
Trim39-203ENSMUST00000113706 P01739 132 aa11.96□□□□□ -0.49
Trim39-203ENSMUST00000113706 P01756 117 aa11.96□□□□□ -0.49
Trim39-203ENSMUST00000113706 P01757 117 aa11.96□□□□□ -0.49
Trim39-203ENSMUST00000113706 Lcn2P11672 200 aa11.96□□□□□ -0.49
Trim39-203ENSMUST00000113706 Olfr1012Q8VFJ7 311 aa11.96□□□□□ -0.49
Trim39-203ENSMUST00000113706 Ighv1-23A0A0A6YVW3 117 aa11.96□□□□□ -0.5
Trim39-203ENSMUST00000113706 P01801 115 aa11.96□□□□□ -0.5
Trim39-203ENSMUST00000113706 P01802 115 aa11.96□□□□□ -0.5
Trim39-203ENSMUST00000113706 Rif1Q6PR54 2419 aaKnown RBP11.95□□□□□ -0.5
Trim39-203ENSMUST00000113706 Ighv14-1A0A075B5R4 117 aa11.95□□□□□ -0.5
Trim39-203ENSMUST00000113706 Gm20517G3UVU6 152 aa11.95□□□□□ -0.5
Trim39-203ENSMUST00000113706 P01750 117 aa11.95□□□□□ -0.5
Trim39-203ENSMUST00000113706 Wfdc15aQ8BH89 80 aa11.95□□□□□ -0.5
Trim39-203ENSMUST00000113706 Cd24P24807 76 aa11.95□□□□□ -0.5
Trim39-203ENSMUST00000113706 Vmn1r216Q8R257 298 aa11.95□□□□□ -0.5
Trim39-203ENSMUST00000113706 Olfr869E9PX82 323 aa11.94□□□□□ -0.5
Trim39-203ENSMUST00000113706 Hspe1Q64433 102 aaKnown RBP11.94□□□□□ -0.5
Trim39-203ENSMUST00000113706 Ssbp1Q9CYR0 152 aaKnown RBP11.94□□□□□ -0.5
Trim39-203ENSMUST00000113706 Trav19A0A0B4J1K4 119 aa11.94□□□□□ -0.5
Trim39-203ENSMUST00000113706 Hoxd3P09027 433 aa11.94□□□□□ -0.5
Trim39-203ENSMUST00000113706 Ifi27l2bQ8VC49 283 aa11.94□□□□□ -0.5
Trim39-203ENSMUST00000113706 Ighv1-64A0A075B5X3 117 aa11.94□□□□□ -0.5
Trim39-203ENSMUST00000113706 Esp38A8R0X1 80 aa11.94□□□□□ -0.5
Trim39-203ENSMUST00000113706 P01727 129 aa11.94□□□□□ -0.5
Trim39-203ENSMUST00000113706 Mrpl20Q9CQL4 149 aa11.94□□□□□ -0.5
Trim39-203ENSMUST00000113706 PdpnQ62011 172 aa11.93□□□□□ -0.5
Trim39-203ENSMUST00000113706 Card19Q9D1I2 183 aa11.93□□□□□ -0.5
Trim39-203ENSMUST00000113706 AplnrQ9WV08 377 aa11.93□□□□□ -0.5
Trim39-203ENSMUST00000113706 Ighv3-8A0A075B5T0 131 aa11.93□□□□□ -0.5
Trim39-203ENSMUST00000113706 Gm26661M0QWV4 156 aa11.92□□□□□ -0.5
Trim39-203ENSMUST00000113706 Ang6Q5GAN0 147 aa11.92□□□□□ -0.5
Trim39-203ENSMUST00000113706 Zcwpw2Q08EN7 125 aa11.92□□□□□ -0.5
Trim39-203ENSMUST00000113706 Olfr1437Q7TQR7 312 aa11.92□□□□□ -0.5
Trim39-203ENSMUST00000113706 RhohQ9D3G9 191 aa11.92□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 74.4 ms