RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Ly6g6dQ9Z1Q3 135 aa11.12□□□□□ -0.63
Col3a1-201ENSMUST00000087883 BC048502Q80Y74 154 aa11.12□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Gm815Q3UWS2 115 aa11.12□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Tnfrsf23Q9ER63 176 aa11.12□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Trav9d-4A0A0G2JG37 103 aa11.11□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Heatr1G3X9B1 2143 aaKnown RBP11.11□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Hoxd3P09027 433 aa11.11□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Lgals4Q8K419 326 aa11.11□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Morn5Q9DAI9 170 aa11.11□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Igkv4-79A0A075B5L8 119 aa11.11□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Trav6n-6A0A075B6B2 114 aa11.11□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Ighv1-23A0A0A6YVW3 117 aa11.11□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Znrf2Q71FD5 238 aa11.11□□□□□ -0.63
Col3a1-201ENSMUST00000087883 LctF8VPT3 1931 aa11.11□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Ighv1-16A0A075B5U1 98 aa11.11□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Ube2e1P52482 193 aa11.11□□□□□ -0.63
Col3a1-201ENSMUST00000087883 March3Q8BRX9 218 aa11.11□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Ss18l2Q9D174 77 aa11.11□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Igkv5-37A0A140T8N4 115 aa11.11□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Rmi2Q3UPE3 149 aa11.11□□□□□ -0.63
Col3a1-201ENSMUST00000087883 4930415O20RikQ8CDT5 131 aa11.11□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Cysrt1Q9D1E4 142 aa11.11□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Olfr313Q5NC55 308 aa11.1□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Lage3Q9CR70 148 aa11.1□□□□□ -0.63
Col3a1-201ENSMUST00000087883 A730015C16RikQ8C992 119 aa11.1□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Fam24aQ8CF27 98 aa11.1□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Tmem14cQ9CQN6 114 aa11.1□□□□□ -0.63
Col3a1-201ENSMUST00000087883 P01738 130 aa11.1□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Tnfrsf13bQ9ET35 249 aa11.09□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Ighv1-58A0A075B5W9 117 aa11.09□□□□□ -0.63
Col3a1-201ENSMUST00000087883 4930447F04RikA2AFR2 126 aa11.09□□□□□ -0.63
Col3a1-201ENSMUST00000087883 P01680 129 aa11.09□□□□□ -0.63
Col3a1-201ENSMUST00000087883 P01786 117 aa11.09□□□□□ -0.63
Col3a1-201ENSMUST00000087883 PtprdQ64487 1912 aa11.09□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Defb26Q30KN7 186 aa11.09□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Synj2bpQ9D6K5 145 aa11.09□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Inafm2A0A1L1STD6 152 aa11.09□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Cela2aP05208 271 aa11.09□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Rspo3Q2TJ95 277 aa11.09□□□□□ -0.63
Col3a1-201ENSMUST00000087883 ApomQ9Z1R3 190 aa11.09□□□□□ -0.63
Col3a1-201ENSMUST00000087883 Igkv4-57A0A0A6YYE7 117 aa11.08□□□□□ -0.64
Col3a1-201ENSMUST00000087883 NpsP0C0P8 89 aa11.08□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Sbf1Q6ZPE2 1867 aa11.08□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Tmem263Q9DAM7 115 aa11.08□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Gm7257D3YX25 99 aa11.08□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Wisp3D3Z5L9 354 aa11.08□□□□□ -0.64
Col3a1-201ENSMUST00000087883 3110021N24RikJ3QMN2 152 aa11.08□□□□□ -0.64
Col3a1-201ENSMUST00000087883 GrnP28798 589 aaKnown RBP11.08□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Tpsg1Q9QUL7 311 aa11.08□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Zfp36l1P23950 338 aa11.08□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Trav6-6A0A075B603 114 aa11.07□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Igkv4-58A0A0G2JGI6 119 aa11.07□□□□□ -0.64
Col3a1-201ENSMUST00000087883 P01802 115 aa11.07□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Rbmy1bQ60990 380 aa11.07□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Defb29Q8BGW9 78 aa11.07□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Wfdc2Q9DAU7 174 aa11.07□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Rspo1Q9Z132 265 aa11.07□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Zfhx2Q2MHN3 2562 aa11.07□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Tmem243B2RVB9 118 aa11.07□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Edn1P22387 202 aa11.07□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Slc25a29Q8BL03 306 aa11.06□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Gm17455G3UW87 128 aa11.06□□□□□ -0.64
Col3a1-201ENSMUST00000087883 NpbQ8K4P1 119 aa11.06□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Klhdc3Q8VEM9 382 aa11.06□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Rbm3O89086 153 aaKnown RBP11.06□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Foxf1Q61080 378 aa11.06□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Phf3B2RQG2 2025 aaKnown RBP11.05□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Smim10l1A0A087WNQ7 89 aa11.05□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Gm20481G3UXK4 153 aa11.05□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Gm10192Q3V0S1 108 aa11.05□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Rnf138Q9CQE0 245 aaKnown RBP11.05□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Ociad2Q9D8W7 154 aa11.05□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Trav12d-3A0A075B6A4 115 aa11.05□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Dad1P61804 113 aa11.05□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Ighv5-9-1A0A0A6YVS4 126 aa11.05□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Ighv3-4A0A0A6YXF1 117 aa11.05□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Mrps12O35680 139 aa11.05□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Prp2P05143 317 aa11.05□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Gm20499D3Z4G5 72 aa11.04□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Mapk1ip1lQ8BH93 242 aa11.04□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Cdpf1Q8R3A2 119 aa11.04□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Ifitm1Q9D103 106 aa11.04□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Cacna1hO88427 2365 aa11.04□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Defb47Q30KN1 79 aa11.04□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Med12lQ8BQM9 2157 aa11.04□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Gm17677B3GLJ5 116 aa11.04□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Gata1P17679 413 aa11.04□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Ndufa12Q7TMF3 145 aaKnown RBP11.04□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Spag11Q8K4N2 71 aa11.04□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Gm15128A2ADW8 449 aa11.04□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Gm20730A0A075B5J6 119 aa11.03□□□□□ -0.64
Col3a1-201ENSMUST00000087883 4933414I15RikQ9D4D5 133 aa11.03□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Ighv1-64A0A075B5X3 117 aa11.03□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Gm10638F6QEG2 257 aa11.03□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Tmem258P61166 79 aa11.03□□□□□ -0.64
Col3a1-201ENSMUST00000087883 SelenowP63300 88 aa11.03□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Prdm6Q3UZD5 596 aa11.03□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Pi4kaE9Q3L2 2105 aa11.03□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Med13Q5SWW4 2171 aa11.03□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Ank3G5E8K5 1961 aa11.03□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 55.9 ms