RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Trav7-5A0A0G2JFX6 112 aa9.65□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Ighv1-62-3P01754 117 aa9.65□□□□□ -0.86
Rnf4-201ENSMUST00000030992 PlaurP35456 327 aa9.65□□□□□ -0.86
Rnf4-201ENSMUST00000030992 Igkv20-101-2A0A0G2JDU3 113 aa9.65□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Cacng7P62956 275 aa9.65□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Gm5150Q1AN92 299 aa9.65□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Tppp3Q9CRB6 176 aaKnown RBP9.65□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Rnf114Q9ET26 229 aa9.65□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Med13lQ6JPI3 2207 aa9.64□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Trdv2-1A0A0G2JGB9 116 aa9.64□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Bri3P28662 125 aa9.64□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Pmis2Q497Q9 96 aa9.64□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Ang5Q5GAN1 145 aa9.64□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Olfr311Q5NC59 308 aa9.64□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Trappc1Q5NCF2 145 aa9.64□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Gpx7Q99LJ6 186 aa9.64□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Ighv1-9A0A0A6YW37 117 aa9.64□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Gm10226O88253 85 aa9.64□□□□□ -0.87
Rnf4-201ENSMUST00000030992 MycbQ6P8Z1 170 aa9.64□□□□□ -0.87
Rnf4-201ENSMUST00000030992 PdfS4R2K0 231 aa9.64□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Q4KKZ1 196 aa9.63□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Tctex1d4Q8CDY7 219 aa9.63□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Shisa9Q9CZN4 424 aa9.63□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Usmg5Q78IK2 58 aa9.63□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Krtap26-1Q9D7N2 215 aa9.63□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Dido1Q8C9B9 2256 aaKnown RBP9.62□□□□□ -0.87
Rnf4-201ENSMUST00000030992 CrxO54751 299 aa9.62□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Ly6g5bQ8K1T4 194 aa9.62□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Sptbn1Q62261 2363 aaKnown RBP9.62□□□□□ -0.87
Rnf4-201ENSMUST00000030992 OtogO55225 2910 aa9.62□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Trav16d-dv11A0A075B617 117 aa9.62□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Igkv4-69A0A0B4J1I6 116 aa9.62□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Vsig4F6TUL9 280 aa9.62□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Ca1P13634 261 aa9.62□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Tmem136Q3TYE7 245 aa9.62□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Rbfox3Q8BIF2 374 aa9.62□□□□□ -0.87
Rnf4-201ENSMUST00000030992 EsdQ9R0P3 282 aa9.62□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Ighv8-8A0A0A6YXQ0 119 aa9.61□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Gm10521E9PZK0 135 aa9.61□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Ins1P01325 108 aa9.61□□□□□ -0.87
Rnf4-201ENSMUST00000030992 P06330 118 aa9.61□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Ufc1Q9CR09 167 aa9.61□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Dkk2Q9QYZ8 259 aa9.61□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Trbv14A0A140T8L9 115 aa9.61□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Gm765B2RVL9 189 aa9.61□□□□□ -0.87
Rnf4-201ENSMUST00000030992 P01739 132 aa9.61□□□□□ -0.87
Rnf4-201ENSMUST00000030992 TshbP12656 138 aa9.61□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Q3UNZ8 350 aa9.61□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Olfr498Q8VEW2 330 aa9.61□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Obox1Q9D350 204 aa9.61□□□□□ -0.87
Rnf4-201ENSMUST00000030992 OtorQ9JIE3 128 aa9.61□□□□□ -0.87
Rnf4-201ENSMUST00000030992 AcacbE9Q4Z2 2448 aa9.61□□□□□ -0.87
Rnf4-201ENSMUST00000030992 PlnP61014 52 aa9.61□□□□□ -0.87
Rnf4-201ENSMUST00000030992 TctaQ8VEA7 122 aa9.61□□□□□ -0.87
Rnf4-201ENSMUST00000030992 H2al2bA9Z055 111 aa9.6□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Defa35E9QLQ1 93 aa9.6□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Spock3Q8BKV0 436 aa9.6□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Ammecr1lQ8JZZ6 310 aa9.6□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Ighv1-58A0A075B5W9 117 aa9.6□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Ighv1-75A0A075B5Y2 117 aa9.6□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Trav6-4A0A075B6B4 115 aa9.6□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Gm17359A0A0G2JEB7 487 aa9.6□□□□□ -0.87
Rnf4-201ENSMUST00000030992 4930447F04RikA2AFR2 126 aa9.6□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Gm12888Q3UW77 119 aa9.6□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Tctex1d2Q9CQ66 144 aa9.6□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Q9CX63 252 aa9.6□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Ube2v1Q9CZY3 147 aa9.6□□□□□ -0.87
Rnf4-201ENSMUST00000030992 CtrlQ9ER05 264 aa9.6□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Hspb8Q9JK92 196 aa9.6□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Snai3Q9QY31 287 aa9.6□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Ighv3-3A0A0A6YWL2 116 aa9.59□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Defb18Q30KP5 85 aa9.59□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Il22ra1Q80XZ4 581 aa9.59□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Cphx2Q8BX39 182 aa9.59□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Ighv1-22A0A075B5U7 117 aa9.59□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Tmem8bB1AWJ5 472 aa9.59□□□□□ -0.87
Rnf4-201ENSMUST00000030992 P01801 115 aa9.59□□□□□ -0.87
Rnf4-201ENSMUST00000030992 P04219 140 aa9.59□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Olfr312Q7TRZ9 308 aa9.59□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Ndufc2Q9CQ54 120 aa9.59□□□□□ -0.87
Rnf4-201ENSMUST00000030992 Gm45521A0A1B0GRK0 198 aa9.58□□□□□ -0.88
Rnf4-201ENSMUST00000030992 P01750 117 aa9.58□□□□□ -0.88
Rnf4-201ENSMUST00000030992 Gm10604Q3V0X7 143 aa9.58□□□□□ -0.88
Rnf4-201ENSMUST00000030992 TdhQ8K3F7 373 aa9.58□□□□□ -0.88
Rnf4-201ENSMUST00000030992 Tmem14cQ9CQN6 114 aa9.58□□□□□ -0.88
Rnf4-201ENSMUST00000030992 Col6a4A2AX52 2309 aa9.58□□□□□ -0.88
Rnf4-201ENSMUST00000030992 Sptan1P16546 2472 aaKnown RBP9.58□□□□□ -0.88
Rnf4-201ENSMUST00000030992 Trav2Q5R1I9 109 aa9.58□□□□□ -0.88
Rnf4-201ENSMUST00000030992 Ube2tQ9CQ37 204 aa9.58□□□□□ -0.88
Rnf4-201ENSMUST00000030992 Tmem238lA0A1B0GS74 79 aa9.57□□□□□ -0.88
Rnf4-201ENSMUST00000030992 Gng4P50153 75 aa9.57□□□□□ -0.88
Rnf4-201ENSMUST00000030992 Tcl1b4P56844 120 aa9.57□□□□□ -0.88
Rnf4-201ENSMUST00000030992 Defa22Q8C1N8 93 aa9.57□□□□□ -0.88
Rnf4-201ENSMUST00000030992 Hnrnpa3Q8BG05 379 aaKnown RBP9.57□□□□□ -0.88
Rnf4-201ENSMUST00000030992 Gpr82Q8BZR0 328 aa9.57□□□□□ -0.88
Rnf4-201ENSMUST00000030992 Olfr1367Q8VFG2 316 aa9.57□□□□□ -0.88
Rnf4-201ENSMUST00000030992 Odf3Q920N1 254 aa9.57□□□□□ -0.88
Rnf4-201ENSMUST00000030992 Cotl1Q9CQI6 142 aa9.57□□□□□ -0.88
Rnf4-201ENSMUST00000030992 Cnn3Q9DAW9 330 aaKnown RBP9.57□□□□□ -0.88
Rnf4-201ENSMUST00000030992 SonQ9QX47 2444 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 50.1 ms