RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 A530064D06RikQ8BNV8 229 aa7.3□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Leap2Q91V13 76 aa7.3□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Wnk2Q3UH66 2149 aa7.3□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 CenpeQ6RT24 2474 aaKnown RBP7.3□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Igkv4-54A0A0G2JES9 117 aa7.3□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Prdm6Q3UZD5 596 aa7.3□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Slc25a48Q8BW66 306 aa7.3□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Ep300B2RWS6 2412 aa7.3□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Trav6-6A0A075B603 114 aa7.3□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Gm45861A0A1B0GRY3 1923 aa7.3□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Igkv4-63A0A0G2JFU6 117 aa7.3□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Gm12353A2AGJ4 60 aa7.3□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Gm37988J3QM41 62 aa7.3□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 CrygbP04344 175 aa7.3□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Acyp1P56376 99 aa7.3□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Pom121l2Q5SW25 972 aa7.3□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Slc25a29Q8BL03 306 aa7.3□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Col6a4A2AX52 2309 aa7.29□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Olfr313Q5NC55 308 aa7.29□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Ang2Q64438 145 aa7.29□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Dock4P59764 1978 aa7.29□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Igkv4-72A0A0B4J1I4 117 aa7.29□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Trav4-3A0A0B4J1K1 110 aa7.29□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 E130218I03RikA0A0U1RNU5 63 aa7.29□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Tm2d3Q8BJ83 261 aa7.29□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Igkv5-37A0A140T8N4 115 aa7.29□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Dazap2Q9DCP9 168 aa7.29□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Myo9bQ9QY06 2114 aa7.29□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Sec16aA2AIX1 2377 aa7.29□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Igkv12-89A0A0G2JGW8 112 aa7.29□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 P01837 106 aa7.29□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Mustn1Q99JI1 82 aa7.29□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Lect2O88803 151 aa7.28□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Pde6gP09174 87 aa7.28□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Ndufa12Q7TMF3 145 aaKnown RBP7.28□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 F930015N05RikQ8C3A3 210 aa7.28□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Igf2rQ07113 2483 aaKnown RBP7.28□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 P01788 123 aa7.28□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Synj2bpQ9D6K5 145 aa7.28□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 KprpB2RUR4 657 aa7.28□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Pglyrp1O88593 182 aa7.28□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Ttc6G3UYY4 1857 aa7.27□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 MpdzQ8VBX6 2055 aa7.27□□□□□ -1.24
Ccdc47-201ENSMUST00000002043 Loxl1P97873 607 aa7.27□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Smim10l1A0A087WNQ7 89 aa7.27□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 C730034F03RikQ8BGL5 111 aa7.27□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Gm4861Q8C5A4 106 aa7.27□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Igkv4-79A0A075B5L8 119 aa7.27□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Trav14d-1A0A075B6B1 121 aa7.27□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Sslp1Q3UN54 99 aa7.27□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Plxna1P70206 1894 aa7.27□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 ElnP54320 860 aa7.27□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 P01790 122 aa7.26□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Rbmy1bQ60990 380 aa7.26□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Fam24aQ8CF27 98 aa7.26□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Pfn2Q9JJV2 140 aa7.26□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Gm9970F6ZED4 185 aa7.26□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 AmelxP63277 210 aa7.26□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Gm10384Q3UQ87 92 aa7.26□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Cysrt1Q9D1E4 142 aa7.26□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Rp1P56716 2095 aa7.26□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Dock3Q8CIQ7 2027 aa7.26□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Trav9d-1A0A075B699 112 aa7.26□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Ighv1-62-2A0A0A6YXZ4 119 aa7.26□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Atp5g3P56384 141 aa7.26□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Atp5g1Q9CR84 136 aa7.26□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Dmrtc1c1Q9D410 238 aa7.26□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Rspo1Q9Z132 265 aa7.26□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Ighv1-50A0A075B5W1 117 aa7.26□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Igkv4-57A0A0A6YYE7 117 aa7.26□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Wisp3D3Z5L9 354 aa7.26□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Rbm3O89086 153 aaKnown RBP7.26□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 P04940 107 aa7.26□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 P04941 107 aa7.26□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Ang4Q3TMQ6 144 aa7.26□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 PifoQ9D9W1 207 aa7.26□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Phf3B2RQG2 2025 aaKnown RBP7.26□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Zfp236S4R299 1847 aa7.25□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Ighv3-8A0A075B5T0 131 aa7.25□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Ighv1-74A0A0G2JGK2 117 aa7.25□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 P01787 123 aa7.25□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Klhdc3Q8VEM9 382 aa7.25□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Sp5Q9JHX2 398 aa7.25□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Ighv1-58A0A075B5W9 117 aa7.25□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 P01756 117 aa7.25□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 P01757 117 aa7.25□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Pcnx1Q9QYC1 2344 aa7.25□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Ighv1-52A0A0A6YXC3 117 aa7.25□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Timm17aQ9Z0V8 171 aa7.25□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Mcm3apQ9WUU9 1971 aa7.25□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Gm15080A2BI02 449 aa7.25□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Sbf2E9PXF8 1872 aa7.25□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Gm5129F6YHA9 99 aa7.24□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Znf740Q6NZQ6 180 aa7.24□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Igkv4-78A0A0A6YYE5 119 aa7.24□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Igkv4-69A0A0B4J1I6 116 aa7.24□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Gm4744D3Z3S5 154 aa7.24□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Atp5eP56382 52 aa7.24□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Defa21Q8C1P2 93 aa7.24□□□□□ -1.25
Ccdc47-201ENSMUST00000002043 Q99M08 65 aa7.24□□□□□ -1.25
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms