RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 Q5VV11 94 aa4.89□□□□□ -1.63
PHGDH-219ENST00000641513 DMAC1Q96GE9 116 aa4.89□□□□□ -1.63
PHGDH-219ENST00000641513 A8MUN3 132 aa4.88□□□□□ -1.63
PHGDH-219ENST00000641513 ACYP2P14621 99 aa4.88□□□□□ -1.63
PHGDH-219ENST00000641513 DMBT1Q9UGM3 2413 aaPredicted RBP4.86□□□□□ -1.63
PHGDH-219ENST00000641513 PSPHP1O15172 72 aa4.86□□□□□ -1.63
PHGDH-219ENST00000641513 LCE1DQ5T752 114 aa4.85□□□□□ -1.63
PHGDH-219ENST00000641513 PRR15LQ9BU68 103 aa4.85□□□□□ -1.63
PHGDH-219ENST00000641513 A8MUU9 505 aa4.81□□□□□ -1.64
PHGDH-219ENST00000641513 CHKB-CPT1BH3BT56 60 aa4.81□□□□□ -1.64
PHGDH-219ENST00000641513 C20orf166-AS1Q96NR2 134 aa4.81□□□□□ -1.64
PHGDH-219ENST00000641513 MYCBP2O75592 4640 aa4.81□□□□□ -1.64
PHGDH-219ENST00000641513 IGKV2D-30A0A075B6S6 120 aa4.79□□□□□ -1.64
PHGDH-219ENST00000641513 CDC42SE1Q9NRR8 79 aa4.79□□□□□ -1.64
PHGDH-219ENST00000641513 ATP11AUNQ6ZP68 121 aa4.78□□□□□ -1.64
PHGDH-219ENST00000641513 C7orf65Q6ZTY9 151 aa4.77□□□□□ -1.65
PHGDH-219ENST00000641513 A6NED7 52 aa4.76□□□□□ -1.65
PHGDH-219ENST00000641513 RPL37P61927 97 aaKnown RBP4.74□□□□□ -1.65
PHGDH-219ENST00000641513 KRTAP4-9Q9BYQ8 210 aa4.74□□□□□ -1.65
PHGDH-219ENST00000641513 TPRXLQ17RH7 258 aa4.73□□□□□ -1.65
PHGDH-219ENST00000641513 LCA10Q71F78 164 aa4.73□□□□□ -1.65
PHGDH-219ENST00000641513 RNF213Q63HN8 5207 aa4.72□□□□□ -1.65
PHGDH-219ENST00000641513 HMCN2Q8NDA2 5059 aa4.71□□□□□ -1.65
PHGDH-219ENST00000641513 KRTAP4-2Q9BYR5 136 aa4.7□□□□□ -1.66
PHGDH-219ENST00000641513 PMAIP1Q13794 54 aa4.69□□□□□ -1.66
PHGDH-219ENST00000641513 SPTSSBQ8NFR3 76 aa4.69□□□□□ -1.66
PHGDH-219ENST00000641513 A0A1B0GU69 56 aa4.68□□□□□ -1.66
PHGDH-219ENST00000641513 SPINK7P58062 85 aa4.68□□□□□ -1.66
PHGDH-219ENST00000641513 A6NN06 94 aa4.66□□□□□ -1.66
PHGDH-219ENST00000641513 A8MU10 97 aa4.64□□□□□ -1.67
PHGDH-219ENST00000641513 SPATA8Q6RVD6 105 aa4.64□□□□□ -1.67
PHGDH-219ENST00000641513 KTN1-AS1Q86SY8 53 aa4.64□□□□□ -1.67
PHGDH-219ENST00000641513 H3BS24 57 aa4.63□□□□□ -1.67
PHGDH-219ENST00000641513 UQCR11O14957 56 aa4.63□□□□□ -1.67
PHGDH-219ENST00000641513 LPAP08519 4548 aa4.62□□□□□ -1.67
PHGDH-219ENST00000641513 SEC61BP60468 96 aaKnown RBP4.62□□□□□ -1.67
PHGDH-219ENST00000641513 SEC61GP60059 68 aa4.59□□□□□ -1.67
PHGDH-219ENST00000641513 MUC2Q02817 5179 aa4.57□□□□□ -1.68
PHGDH-219ENST00000641513 MIR22HGQ0VDD5 57 aa4.57□□□□□ -1.68
PHGDH-219ENST00000641513 LRP2P98164 4655 aa4.56□□□□□ -1.68
PHGDH-219ENST00000641513 COX6B2Q6YFQ2 88 aa4.56□□□□□ -1.68
PHGDH-219ENST00000641513 KRTAP3-1Q9BYR8 98 aa4.54□□□□□ -1.68
PHGDH-219ENST00000641513 FAT4Q6V0I7 4981 aa4.53□□□□□ -1.68
PHGDH-219ENST00000641513 KRTAP4-11Q9BYQ6 195 aa4.53□□□□□ -1.68
PHGDH-219ENST00000641513 RBM12B-AS1Q9P1G2 102 aa4.53□□□□□ -1.68
PHGDH-219ENST00000641513 KRTAP4-1Q9BYQ7 146 aa4.47□□□□□ -1.69
PHGDH-219ENST00000641513 H1FX-AS1Q4G0G2 97 aa4.46□□□□□ -1.7
PHGDH-219ENST00000641513 S4R3F8 94 aa4.46□□□□□ -1.7
PHGDH-219ENST00000641513 MUC17Q685J3 4493 aa4.45□□□□□ -1.7
PHGDH-219ENST00000641513 A0A1B0GU33 70 aa4.45□□□□□ -1.7
PHGDH-219ENST00000641513 LCE4AQ5TA78 99 aa4.45□□□□□ -1.7
PHGDH-219ENST00000641513 H0YAA0 97 aa4.43□□□□□ -1.7
PHGDH-219ENST00000641513 FSIP2Q5CZC0 6907 aa4.39□□□□□ -1.71
PHGDH-219ENST00000641513 KRTAP5-3Q6L8H2 238 aa4.36□□□□□ -1.71
PHGDH-219ENST00000641513 K7ERS5 55 aa4.35□□□□□ -1.71
PHGDH-219ENST00000641513 CSAG1Q6PB30 78 aa4.34□□□□□ -1.71
PHGDH-219ENST00000641513 KRTAP10-6P60371 365 aaPredicted RBP4.33□□□□□ -1.72
PHGDH-219ENST00000641513 LCE5AQ5TCM9 118 aa4.3□□□□□ -1.72
PHGDH-219ENST00000641513 KRTAP9-7A8MTY7 169 aa4.29□□□□□ -1.72
PHGDH-219ENST00000641513 KRTAP19-2Q3LHN2 52 aa4.29□□□□□ -1.72
PHGDH-219ENST00000641513 PRAC1Q96KF2 57 aa4.29□□□□□ -1.72
PHGDH-219ENST00000641513 ADM2Q7Z4H4 148 aa4.27□□□□□ -1.73
PHGDH-219ENST00000641513 LINC01554Q52M75 96 aa4.26□□□□□ -1.73
PHGDH-219ENST00000641513 CRCT1Q9UGL9 99 aa4.26□□□□□ -1.73
PHGDH-219ENST00000641513 M0QZ58 72 aa4.22□□□□□ -1.73
PHGDH-219ENST00000641513 KRTAP9-8Q9BYQ0 159 aa4.22□□□□□ -1.73
PHGDH-219ENST00000641513 M0R2T5 61 aa4.21□□□□□ -1.74
PHGDH-219ENST00000641513 KRTAP25-1Q3LHN0 102 aa4.21□□□□□ -1.74
PHGDH-219ENST00000641513 KRTAP13-4Q3LI77 160 aa4.21□□□□□ -1.74
PHGDH-219ENST00000641513 P0C880 135 aa4.2□□□□□ -1.74
PHGDH-219ENST00000641513 ROMO1P60602 79 aa4.2□□□□□ -1.74
PHGDH-219ENST00000641513 MT1HP80294 61 aa4.16□□□□□ -1.74
PHGDH-219ENST00000641513 KRTAP9-3Q9BYQ3 159 aa4.15□□□□□ -1.75
PHGDH-219ENST00000641513 FLGP20930 4061 aaPredicted RBP4.15□□□□□ -1.75
PHGDH-219ENST00000641513 A0A0D9SG42 100 aa4.11□□□□□ -1.75
PHGDH-219ENST00000641513 KRTAP12-1P59990 96 aa4.11□□□□□ -1.75
PHGDH-219ENST00000641513 R4GN34 69 aa4.11□□□□□ -1.75
PHGDH-219ENST00000641513 KRTAP19-4Q3LI73 84 aa4.09□□□□□ -1.75
PHGDH-219ENST00000641513 KRTAP12-2P59991 146 aa4.08□□□□□ -1.76
PHGDH-219ENST00000641513 KRTAP10-10P60014 251 aa4.03□□□□□ -1.76
PHGDH-219ENST00000641513 SPINT4Q6UDR6 99 aa4.02□□□□□ -1.77
PHGDH-219ENST00000641513 CRIPTQ9P021 101 aa4.02□□□□□ -1.77
PHGDH-219ENST00000641513 MT2AP02795 61 aa4□□□□□ -1.77
PHGDH-219ENST00000641513 MT1FP04733 61 aa3.98□□□□□ -1.77
PHGDH-219ENST00000641513 SPRR2GQ9BYE4 73 aa3.91□□□□□ -1.78
PHGDH-219ENST00000641513 CAMK2N1Q7Z7J9 78 aa3.88□□□□□ -1.79
PHGDH-219ENST00000641513 C10orf95Q9H7T3 257 aa3.88□□□□□ -1.79
PHGDH-219ENST00000641513 PP632Q6XCG6 107 aa3.87□□□□□ -1.79
PHGDH-219ENST00000641513 PLAC4Q8WY50 150 aa3.87□□□□□ -1.79
PHGDH-219ENST00000641513 SYNE2Q8WXH0 6885 aaKnown RBP3.84□□□□□ -1.79
PHGDH-219ENST00000641513 SSPOA2VEC9 5147 aa3.84□□□□□ -1.79
PHGDH-219ENST00000641513 KRTAP23-1A1A580 65 aa3.83□□□□□ -1.8
PHGDH-219ENST00000641513 KRTAP15-1Q3LI76 137 aa3.81□□□□□ -1.8
PHGDH-219ENST00000641513 KRTAP19-8Q3LI54 63 aa3.8□□□□□ -1.8
PHGDH-219ENST00000641513 FCGBPQ9Y6R7 5405 aaPredicted RBP3.77□□□□□ -1.81
PHGDH-219ENST00000641513 MT1BP07438 61 aa3.75□□□□□ -1.81
PHGDH-219ENST00000641513 NEBP20929 6669 aa3.73□□□□□ -1.81
PHGDH-219ENST00000641513 USH2AO75445 5202 aa3.73□□□□□ -1.81
PHGDH-219ENST00000641513 MACF1Q9UPN3 7388 aaKnown RBP3.73□□□□□ -1.81
PHGDH-219ENST00000641513 TNP1P09430 55 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms